Protein–RNA interactions for Protein: Q8IUM7

NPAS4, Neuronal PAS domain-containing protein 4, humanhuman

Predictions only

Length 802 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPAS4Q8IUM7 ADGRE3-204ENST00000595472 486 ntTSL 3 BASIC15.54■□□□□ 0.08
NPAS4Q8IUM7 NOMO1-207ENST00000610363 3765 ntAPPRIS ALT2 TSL 1 (best) BASIC15.54■□□□□ 0.08
NPAS4Q8IUM7 WASHC2C-208ENST00000537517 4417 ntAPPRIS ALT2 TSL 2 BASIC15.54■□□□□ 0.08
NPAS4Q8IUM7 AGK-211ENST00000629555 2765 ntTSL 5 BASIC15.54■□□□□ 0.08
NPAS4Q8IUM7 CYP11A1-201ENST00000268053 1934 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
NPAS4Q8IUM7 DUS2-201ENST00000358896 1933 ntAPPRIS P1 TSL 2 BASIC15.54■□□□□ 0.08
NPAS4Q8IUM7 RAP2C-201ENST00000342983 3896 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
NPAS4Q8IUM7 ERRFI1-201ENST00000377482 3104 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
NPAS4Q8IUM7 TCAF2-203ENST00000425618 2448 ntTSL 2 BASIC15.54■□□□□ 0.08
NPAS4Q8IUM7 INSC-208ENST00000530161 1702 ntAPPRIS ALT2 TSL 1 (best) BASIC15.54■□□□□ 0.08
NPAS4Q8IUM7 FLAD1-201ENST00000292180 2160 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
NPAS4Q8IUM7 GSK3B-201ENST00000264235 7711 ntAPPRIS ALT1 TSL 1 (best) BASIC15.53■□□□□ 0.08
NPAS4Q8IUM7 GUCY1B3-206ENST00000507146 2709 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
NPAS4Q8IUM7 GTF2IRD1-203ENST00000455841 3315 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
NPAS4Q8IUM7 CCDC43-203ENST00000588210 2067 ntAPPRIS ALT1 TSL 1 (best) BASIC15.53■□□□□ 0.08
NPAS4Q8IUM7 CCDC51-206ENST00000447018 1461 ntTSL 2 BASIC15.53■□□□□ 0.08
NPAS4Q8IUM7 RASA4-204ENST00000462172 2634 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
NPAS4Q8IUM7 MIDN-201ENST00000300952 3790 ntAPPRIS P2 TSL 5 BASIC15.53■□□□□ 0.08
NPAS4Q8IUM7 CCHCR1-208ENST00000451521 2587 ntAPPRIS ALT2 TSL 1 (best) BASIC15.53■□□□□ 0.08
NPAS4Q8IUM7 ADCY2-201ENST00000338316 6575 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
NPAS4Q8IUM7 ATF4-202ENST00000396680 1419 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
NPAS4Q8IUM7 SLC16A3-211ENST00000581287 4830 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
NPAS4Q8IUM7 ZNF197-203ENST00000383744 1989 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
NPAS4Q8IUM7 NMBR-201ENST00000258042 1354 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
NPAS4Q8IUM7 FDFT1-223ENST00000615631 2462 ntAPPRIS P1 TSL 5 BASIC15.53■□□□□ 0.08
NPAS4Q8IUM7 FTX-216ENST00000638985 1367 ntTSL 5 BASIC15.53■□□□□ 0.08
NPAS4Q8IUM7 MIB1-201ENST00000261537 9576 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
NPAS4Q8IUM7 XRRA1-202ENST00000340360 5681 ntAPPRIS P1 TSL 5 BASIC15.53■□□□□ 0.08
NPAS4Q8IUM7 SARS2-202ENST00000430193 1886 ntAPPRIS ALT2 TSL 5 BASIC15.53■□□□□ 0.08
NPAS4Q8IUM7 DUOXA1-216ENST00000613425 1867 ntTSL 5 BASIC15.53■□□□□ 0.08
NPAS4Q8IUM7 CST1-201ENST00000304749 760 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
NPAS4Q8IUM7 RNASE10-201ENST00000328444 717 ntAPPRIS P1 BASIC15.53■□□□□ 0.08
NPAS4Q8IUM7 GYPC-203ENST00000409836 932 ntAPPRIS ALT2 TSL 1 (best) BASIC15.53■□□□□ 0.08
NPAS4Q8IUM7 NDUFS7-203ENST00000414651 841 ntTSL 5 BASIC15.53■□□□□ 0.08
NPAS4Q8IUM7 Metazoa_SRP.9-201ENST00000415635 283 ntBASIC15.53■□□□□ 0.08
NPAS4Q8IUM7 AL121845.1-201ENST00000447343 464 ntTSL 2 BASIC15.53■□□□□ 0.08
NPAS4Q8IUM7 LINC01563-201ENST00000456235 750 ntTSL 2 BASIC15.53■□□□□ 0.08
NPAS4Q8IUM7 SBSN-202ENST00000518157 957 ntAPPRIS P3 TSL 1 (best) BASIC15.53■□□□□ 0.08
NPAS4Q8IUM7 LINC01154-201ENST00000548617 454 ntTSL 3 BASIC15.53■□□□□ 0.08
NPAS4Q8IUM7 NPTN-204ENST00000562924 1094 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
NPAS4Q8IUM7 AC024361.2-201ENST00000574471 898 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
NPAS4Q8IUM7 AC099811.3-201ENST00000586351 425 ntTSL 3 BASIC15.53■□□□□ 0.08
NPAS4Q8IUM7 AC008687.1-201ENST00000591656 786 ntAPPRIS P1 TSL 2 BASIC15.53■□□□□ 0.08
NPAS4Q8IUM7 SLC27A5-204ENST00000594786 643 ntTSL 2 BASIC15.53■□□□□ 0.08
NPAS4Q8IUM7 AC140113.1-201ENST00000603467 169 ntBASIC15.53■□□□□ 0.08
NPAS4Q8IUM7 AC007250.1-201ENST00000608934 338 ntBASIC15.53■□□□□ 0.08
NPAS4Q8IUM7 AC104333.4-201ENST00000632866 554 ntTSL 3 BASIC15.53■□□□□ 0.08
NPAS4Q8IUM7 CD59-201ENST00000351554 1775 ntAPPRIS P2 TSL 2 BASIC15.53■□□□□ 0.08
NPAS4Q8IUM7 DYNLL2-201ENST00000579991 6805 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
NPAS4Q8IUM7 HID1-202ENST00000425042 3271 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
NPAS4Q8IUM7 INPP5B-204ENST00000373026 3230 ntAPPRIS ALT2 TSL 5 BASIC15.53■□□□□ 0.08
NPAS4Q8IUM7 TEAD3-202ENST00000402886 2729 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
NPAS4Q8IUM7 LETMD1-235ENST00000552739 1713 ntTSL 2 BASIC15.53■□□□□ 0.08
NPAS4Q8IUM7 AC022532.1-201ENST00000624563 1728 ntBASIC15.53■□□□□ 0.08
NPAS4Q8IUM7 TMTC2-203ENST00000548305 2682 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
NPAS4Q8IUM7 JRK-203ENST00000571961 2687 ntAPPRIS ALT2 TSL 1 (best) BASIC15.53■□□□□ 0.08
NPAS4Q8IUM7 HEMK1-201ENST00000232854 6087 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
NPAS4Q8IUM7 HNRNPDL-208ENST00000621267 4139 ntAPPRIS P2 TSL 1 (best) BASIC15.53■□□□□ 0.08
NPAS4Q8IUM7 FUT3-209ENST00000589918 2182 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
NPAS4Q8IUM7 ASB15-207ENST00000540573 1651 ntTSL 2 BASIC15.53■□□□□ 0.08
NPAS4Q8IUM7 YY1AP1-201ENST00000295566 2626 ntAPPRIS P4 TSL 2 BASIC15.53■□□□□ 0.08
NPAS4Q8IUM7 ITSN1-205ENST00000381291 5437 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
NPAS4Q8IUM7 NPC1L1-203ENST00000423141 2554 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
NPAS4Q8IUM7 HDAC5-202ENST00000336057 5040 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
NPAS4Q8IUM7 CDH15-201ENST00000289746 2847 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
NPAS4Q8IUM7 MKS1-202ENST00000393119 2397 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
NPAS4Q8IUM7 KAT5-216ENST00000534650 1875 ntTSL 1 (best) BASIC15.52■□□□□ 0.08
NPAS4Q8IUM7 NACAD-202ENST00000490531 4780 ntAPPRIS P1 TSL 5 BASIC15.52■□□□□ 0.08
NPAS4Q8IUM7 PDE8B-204ENST00000342343 2677 ntAPPRIS ALT2 TSL 1 (best) BASIC15.52■□□□□ 0.08
NPAS4Q8IUM7 LIPE-AS1-204ENST00000594624 1448 ntTSL 1 (best) BASIC15.52■□□□□ 0.08
NPAS4Q8IUM7 IRF9-202ENST00000396864 1838 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
NPAS4Q8IUM7 NEK11-205ENST00000507910 1841 ntAPPRIS ALT2 TSL 1 (best) BASIC15.52■□□□□ 0.08
NPAS4Q8IUM7 ABCB6-201ENST00000265316 3016 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
NPAS4Q8IUM7 RECQL4-209ENST00000617875 3809 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
NPAS4Q8IUM7 NTRK2-205ENST00000376208 8178 ntTSL 1 (best) BASIC15.52■□□□□ 0.08
NPAS4Q8IUM7 C16orf54-201ENST00000329410 2585 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
NPAS4Q8IUM7 MBD1-217ENST00000588937 1761 ntAPPRIS ALT2 TSL 1 (best) BASIC15.52■□□□□ 0.08
NPAS4Q8IUM7 ACP2-212ENST00000533929 1366 ntTSL 2 BASIC15.52■□□□□ 0.08
NPAS4Q8IUM7 FLJ16779-201ENST00000612722 7638 ntBASIC15.52■□□□□ 0.08
NPAS4Q8IUM7 ARMCX1-201ENST00000372829 2141 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
NPAS4Q8IUM7 TRIM3-215ENST00000639856 2137 ntTSL 5 BASIC15.52■□□□□ 0.08
NPAS4Q8IUM7 EFHC1-212ENST00000635984 3293 ntTSL 5 BASIC15.52■□□□□ 0.08
NPAS4Q8IUM7 ARMC8-213ENST00000470821 1656 ntTSL 5 BASIC15.52■□□□□ 0.08
NPAS4Q8IUM7 PIGT-246ENST00000639499 2021 ntTSL 5 BASIC15.52■□□□□ 0.08
NPAS4Q8IUM7 CCDC47-201ENST00000225726 3466 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
NPAS4Q8IUM7 MRPL32-201ENST00000223324 1035 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
NPAS4Q8IUM7 C7orf61-201ENST00000332375 1004 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
NPAS4Q8IUM7 LCE3B-201ENST00000335633 288 ntAPPRIS P1 BASIC15.52■□□□□ 0.08
NPAS4Q8IUM7 Metazoa_SRP.4-201ENST00000366232 298 ntBASIC15.52■□□□□ 0.08
NPAS4Q8IUM7 TMEM216-202ENST00000398979 908 ntTSL 1 (best) BASIC15.52■□□□□ 0.08
NPAS4Q8IUM7 PTGES3-203ENST00000436399 941 ntTSL 2 BASIC15.52■□□□□ 0.08
NPAS4Q8IUM7 AC108462.1-201ENST00000457467 850 ntTSL 3 BASIC15.52■□□□□ 0.08
NPAS4Q8IUM7 TNNT2-214ENST00000458432 1182 ntAPPRIS ALT2 TSL 5 BASIC15.52■□□□□ 0.08
NPAS4Q8IUM7 PTK2-225ENST00000520892 571 ntTSL 4 BASIC15.52■□□□□ 0.08
NPAS4Q8IUM7 EMP2-203ENST00000536829 781 ntAPPRIS P1 TSL 2 BASIC15.52■□□□□ 0.08
NPAS4Q8IUM7 AC007952.4-201ENST00000573866 637 ntBASIC15.52■□□□□ 0.08
NPAS4Q8IUM7 AC136624.2-201ENST00000574883 542 ntTSL 3 BASIC15.52■□□□□ 0.08
NPAS4Q8IUM7 ZNF530-203ENST00000597864 634 ntTSL 2 BASIC15.52■□□□□ 0.08
NPAS4Q8IUM7 EAF1-AS1-208ENST00000608408 770 ntTSL 5 BASIC15.52■□□□□ 0.08
NPAS4Q8IUM7 MAGED2-201ENST00000218439 1958 ntAPPRIS P2 TSL 5 BASIC15.52■□□□□ 0.07
Retrieved 100 of 98,524 protein–RNA pairs in 41.8 ms