Protein–RNA interactions for Protein: Q86WR0

CCDC25, Coiled-coil domain-containing protein 25, humanhuman

Predictions only

Length 208 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC25Q86WR0 FBXO34-201ENST00000313833 3464 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
CCDC25Q86WR0 AC011498.7-201ENST00000624986 2027 ntBASIC15.26■□□□□ 0.03
CCDC25Q86WR0 DNMT3B-202ENST00000328111 4336 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
CCDC25Q86WR0 AP1M1-211ENST00000590756 1705 ntTSL 5 BASIC15.26■□□□□ 0.03
CCDC25Q86WR0 SLC4A5-201ENST00000346834 6233 ntAPPRIS P4 TSL 5 BASIC15.25■□□□□ 0.03
CCDC25Q86WR0 ZC2HC1A-201ENST00000263849 3352 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
CCDC25Q86WR0 NSD2-204ENST00000382891 7534 ntAPPRIS P1 TSL 5 BASIC15.25■□□□□ 0.03
CCDC25Q86WR0 TCAF1P1-201ENST00000414990 2232 ntBASIC15.25■□□□□ 0.03
CCDC25Q86WR0 CATSPERE-201ENST00000366531 3038 ntAPPRIS ALT2 TSL 2 BASIC15.25■□□□□ 0.03
CCDC25Q86WR0 NUMB-216ENST00000555394 3037 ntAPPRIS ALT1 TSL 1 (best) BASIC15.25■□□□□ 0.03
CCDC25Q86WR0 SLC35G1-201ENST00000371408 3490 ntAPPRIS P3 TSL 2 BASIC15.25■□□□□ 0.03
CCDC25Q86WR0 ZMIZ2-206ENST00000441627 5089 ntAPPRIS P4 TSL 1 (best) BASIC15.25■□□□□ 0.03
CCDC25Q86WR0 VRK3-217ENST00000599538 2126 ntAPPRIS P3 TSL 1 (best) BASIC15.25■□□□□ 0.03
CCDC25Q86WR0 ADAM33-207ENST00000619289 3195 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
CCDC25Q86WR0 KRT74-203ENST00000549343 2858 ntTSL 5 BASIC15.25■□□□□ 0.03
CCDC25Q86WR0 AC027288.3-202ENST00000550268 1820 ntTSL 2 BASIC15.25■□□□□ 0.03
CCDC25Q86WR0 SCAF4-202ENST00000399804 4127 ntAPPRIS ALT2 TSL 1 (best) BASIC15.25■□□□□ 0.03
CCDC25Q86WR0 ATG13-215ENST00000529655 2566 ntAPPRIS P1 TSL 2 BASIC15.25■□□□□ 0.03
CCDC25Q86WR0 GSE1-203ENST00000405402 4366 ntAPPRIS ALT2 TSL 1 (best) BASIC15.25■□□□□ 0.03
CCDC25Q86WR0 NDUFA3-203ENST00000391763 338 ntTSL 2 BASIC15.25■□□□□ 0.03
CCDC25Q86WR0 PSMB8-203ENST00000395339 1025 ntTSL 3 BASIC15.25■□□□□ 0.03
CCDC25Q86WR0 ITIH1-202ENST00000405128 1122 ntTSL 2 BASIC15.25■□□□□ 0.03
CCDC25Q86WR0 AC091729.2-201ENST00000415656 302 ntTSL 3 BASIC15.25■□□□□ 0.03
CCDC25Q86WR0 AC107890.1-201ENST00000422478 521 ntBASIC15.25■□□□□ 0.03
CCDC25Q86WR0 ZNF295-AS1-202ENST00000429739 783 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
CCDC25Q86WR0 TREX1-201ENST00000433541 1105 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
CCDC25Q86WR0 LRRC74B-201ENST00000442047 1179 ntAPPRIS P1 TSL 5 BASIC15.25■□□□□ 0.03
CCDC25Q86WR0 AL359815.1-201ENST00000457706 821 ntTSL 2 BASIC15.25■□□□□ 0.03
CCDC25Q86WR0 VDAC1P7-201ENST00000462417 847 ntBASIC15.25■□□□□ 0.03
CCDC25Q86WR0 CCKBR-204ENST00000531712 463 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
CCDC25Q86WR0 TMEM263-206ENST00000550344 925 ntAPPRIS P1 TSL 2 BASIC15.25■□□□□ 0.03
CCDC25Q86WR0 AC027088.1-201ENST00000557966 1117 ntTSL 2 BASIC15.25■□□□□ 0.03
CCDC25Q86WR0 AC036164.1-201ENST00000570544 333 ntBASIC15.25■□□□□ 0.03
CCDC25Q86WR0 AC093520.1-201ENST00000567545 1767 ntTSL 5 BASIC15.25■□□□□ 0.03
CCDC25Q86WR0 PGLYRP2-201ENST00000292609 2758 ntAPPRIS ALT2 TSL 1 (best) BASIC15.25■□□□□ 0.03
CCDC25Q86WR0 SLC22A5-201ENST00000245407 3237 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
CCDC25Q86WR0 AP4B1-201ENST00000256658 2742 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
CCDC25Q86WR0 IKZF1-202ENST00000343574 5925 ntTSL 5 BASIC15.25■□□□□ 0.03
CCDC25Q86WR0 FXR1-214ENST00000480918 1996 ntTSL 2 BASIC15.25■□□□□ 0.03
CCDC25Q86WR0 MAGEA4-201ENST00000276344 1724 ntAPPRIS P1 TSL 2 BASIC15.25■□□□□ 0.03
CCDC25Q86WR0 POLD3-208ENST00000532497 1700 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
CCDC25Q86WR0 ARFGAP1-212ENST00000519604 3191 ntTSL 2 BASIC15.25■□□□□ 0.03
CCDC25Q86WR0 SLC22A20-202ENST00000525437 3196 ntTSL 5 BASIC15.25■□□□□ 0.03
CCDC25Q86WR0 AC023794.5-201ENST00000564380 2157 ntBASIC15.25■□□□□ 0.03
CCDC25Q86WR0 ASF1A-201ENST00000229595 2362 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
CCDC25Q86WR0 AC100757.3-201ENST00000622361 1406 ntBASIC15.25■□□□□ 0.03
CCDC25Q86WR0 MAP3K4-203ENST00000366920 5445 ntAPPRIS ALT2 TSL 5 BASIC15.25■□□□□ 0.03
CCDC25Q86WR0 SLC22A12-202ENST00000377567 2599 ntTSL 5 BASIC15.25■□□□□ 0.03
CCDC25Q86WR0 RAPGEF3-218ENST00000548919 2776 ntTSL 2 BASIC15.24■□□□□ 0.03
CCDC25Q86WR0 SMARCA4-202ENST00000413806 5512 ntTSL 5 BASIC15.24■□□□□ 0.03
CCDC25Q86WR0 SAMD4A-202ENST00000392067 6833 ntAPPRIS P1 TSL 2 BASIC15.24■□□□□ 0.03
CCDC25Q86WR0 ZNF772-202ENST00000356584 1799 ntAPPRIS ALT2 TSL 2 BASIC15.24■□□□□ 0.03
CCDC25Q86WR0 TMEM245-201ENST00000374586 7980 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
CCDC25Q86WR0 ABCC6-201ENST00000205557 5747 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
CCDC25Q86WR0 ZBTB20-215ENST00000481632 2800 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
CCDC25Q86WR0 KIAA0513-202ENST00000538274 7381 ntTSL 2 BASIC15.24■□□□□ 0.03
CCDC25Q86WR0 SCFD1-203ENST00000458591 2359 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
CCDC25Q86WR0 USP48-213ENST00000529637 3228 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
CCDC25Q86WR0 RBP1-203ENST00000483943 1935 ntTSL 2 BASIC15.24■□□□□ 0.03
CCDC25Q86WR0 AHNAK-201ENST00000257247 1024 ntAPPRIS ALT2 TSL 1 (best) BASIC15.24■□□□□ 0.03
CCDC25Q86WR0 CXorf40A-201ENST00000359293 974 ntAPPRIS P3 TSL 2 BASIC15.24■□□□□ 0.03
CCDC25Q86WR0 PARK7-203ENST00000377491 977 ntAPPRIS P1 TSL 3 BASIC15.24■□□□□ 0.03
CCDC25Q86WR0 TSEN15P1-201ENST00000423257 515 ntBASIC15.24■□□□□ 0.03
CCDC25Q86WR0 AC092580.3-201ENST00000430932 139 ntBASIC15.24■□□□□ 0.03
CCDC25Q86WR0 SNX21-206ENST00000462307 1043 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
CCDC25Q86WR0 LINC02437-201ENST00000505053 911 ntTSL 3 BASIC15.24■□□□□ 0.03
CCDC25Q86WR0 SPDYE18-201ENST00000510091 1050 ntBASIC15.24■□□□□ 0.03
CCDC25Q86WR0 ZNF890P-202ENST00000530367 1156 ntBASIC15.24■□□□□ 0.03
CCDC25Q86WR0 CALM1-205ENST00000553542 877 ntTSL 5 BASIC15.24■□□□□ 0.03
CCDC25Q86WR0 FSTL3-202ENST00000588773 746 ntTSL 2 BASIC15.24■□□□□ 0.03
CCDC25Q86WR0 AL391069.4-201ENST00000609583 481 ntBASIC15.24■□□□□ 0.03
CCDC25Q86WR0 SCP2-217ENST00000640998 1101 ntTSL 5 BASIC15.24■□□□□ 0.03
CCDC25Q86WR0 STXBP6-202ENST00000396700 4021 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
CCDC25Q86WR0 MAN2B1-203ENST00000456935 3184 ntAPPRIS P3 TSL 1 (best) BASIC15.24■□□□□ 0.03
CCDC25Q86WR0 AC090286.1-201ENST00000354432 1489 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
CCDC25Q86WR0 C2-205ENST00000418949 1658 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
CCDC25Q86WR0 ZNF362-201ENST00000373428 2936 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
CCDC25Q86WR0 GPC6-201ENST00000377047 6467 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
CCDC25Q86WR0 SLC9B1-201ENST00000296422 1879 ntAPPRIS P3 TSL 1 (best) BASIC15.24■□□□□ 0.03
CCDC25Q86WR0 APBB2-211ENST00000506352 3316 ntAPPRIS ALT1 TSL 5 BASIC15.24■□□□□ 0.03
CCDC25Q86WR0 HSPA8P5-201ENST00000456928 2069 ntBASIC15.24■□□□□ 0.03
CCDC25Q86WR0 NOX5-209ENST00000530406 2289 ntAPPRIS P4 TSL 1 (best) BASIC15.24■□□□□ 0.03
CCDC25Q86WR0 SLC16A1-201ENST00000369626 3910 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
CCDC25Q86WR0 SF1-201ENST00000227503 2850 ntAPPRIS P3 TSL 1 (best) BASIC15.24■□□□□ 0.03
CCDC25Q86WR0 CDH1-201ENST00000261769 4889 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
CCDC25Q86WR0 NDUFS7-202ENST00000313408 2818 ntTSL 2 BASIC15.24■□□□□ 0.03
CCDC25Q86WR0 RNASEH2C-201ENST00000308418 2794 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
CCDC25Q86WR0 ABAT-213ENST00000567812 1959 ntTSL 2 BASIC15.24■□□□□ 0.03
CCDC25Q86WR0 CD48-201ENST00000368045 1793 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
CCDC25Q86WR0 GOLGA6L2-201ENST00000312015 1379 ntAPPRIS ALT2 TSL 2 BASIC15.24■□□□□ 0.03
CCDC25Q86WR0 IRF6-204ENST00000542854 4256 ntTSL 2 BASIC15.23■□□□□ 0.03
CCDC25Q86WR0 KLHL8-201ENST00000273963 5621 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
CCDC25Q86WR0 USP22-201ENST00000261497 5220 ntAPPRIS P2 TSL 1 (best) BASIC15.23■□□□□ 0.03
CCDC25Q86WR0 CACNA2D2-204ENST00000424201 5206 ntAPPRIS P3 TSL 1 (best) BASIC15.23■□□□□ 0.03
CCDC25Q86WR0 TNN-202ENST00000621086 4234 ntTSL 5 BASIC15.23■□□□□ 0.03
CCDC25Q86WR0 MAP7D3-201ENST00000316077 4567 ntAPPRIS P3 TSL 1 (best) BASIC15.23■□□□□ 0.03
CCDC25Q86WR0 POLR1E-202ENST00000377798 1868 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
CCDC25Q86WR0 FAM200B-201ENST00000422728 2962 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
CCDC25Q86WR0 SDHAF2-201ENST00000301761 2033 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
CCDC25Q86WR0 NR4A1-202ENST00000360284 2589 ntTSL 2 BASIC15.23■□□□□ 0.03
Retrieved 100 of 98,524 protein–RNA pairs in 35.8 ms