Protein–RNA interactions for Protein: Q86UE6

LRRTM1, Leucine-rich repeat transmembrane neuronal protein 1, humanhuman

Predictions only

Length 522 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRRTM1Q86UE6 PCAT6-201ENST00000417262 748 ntTSL 2 BASIC12.8□□□□□ -0.36
LRRTM1Q86UE6 GNB2-205ENST00000419828 1285 ntTSL 5 BASIC12.8□□□□□ -0.36
LRRTM1Q86UE6 RASL12-203ENST00000434605 982 ntTSL 2 BASIC12.8□□□□□ -0.36
LRRTM1Q86UE6 AL035588.1-201ENST00000438967 408 ntTSL 3 BASIC12.8□□□□□ -0.36
LRRTM1Q86UE6 SNHG11-209ENST00000440918 556 ntTSL 3 BASIC12.8□□□□□ -0.36
LRRTM1Q86UE6 AC114812.1-204ENST00000449669 728 ntBASIC12.8□□□□□ -0.36
LRRTM1Q86UE6 GIMAP3P-201ENST00000495150 836 ntBASIC12.8□□□□□ -0.36
LRRTM1Q86UE6 NME2-207ENST00000514264 850 ntAPPRIS P1 TSL 2 BASIC12.8□□□□□ -0.36
LRRTM1Q86UE6 AC091053.1-201ENST00000529883 744 ntTSL 3 BASIC12.8□□□□□ -0.36
LRRTM1Q86UE6 ARL6IP1-202ENST00000546206 1107 ntTSL 2 BASIC12.8□□□□□ -0.36
LRRTM1Q86UE6 HOPX-214ENST00000556614 1138 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
LRRTM1Q86UE6 AL390726.5-201ENST00000562942 871 ntTSL 2 BASIC12.8□□□□□ -0.36
LRRTM1Q86UE6 AC015911.4-201ENST00000588022 1070 ntBASIC12.8□□□□□ -0.36
LRRTM1Q86UE6 AC010615.2-202ENST00000597444 832 ntTSL 3 BASIC12.8□□□□□ -0.36
LRRTM1Q86UE6 AL158211.3-201ENST00000607385 239 ntBASIC12.8□□□□□ -0.36
LRRTM1Q86UE6 AC007431.3-201ENST00000623221 587 ntBASIC12.8□□□□□ -0.36
LRRTM1Q86UE6 DAAM2-201ENST00000274867 6194 ntAPPRIS ALT1 TSL 1 (best) BASIC12.8□□□□□ -0.36
LRRTM1Q86UE6 MFSD2B-201ENST00000338315 2850 ntAPPRIS ALT2 TSL 5 BASIC12.8□□□□□ -0.36
LRRTM1Q86UE6 RTFDC1-203ENST00000395881 1572 ntTSL 2 BASIC12.8□□□□□ -0.36
LRRTM1Q86UE6 MARK2-206ENST00000425897 2100 ntAPPRIS ALT2 TSL 1 (best) BASIC12.8□□□□□ -0.36
LRRTM1Q86UE6 SHCBP1-201ENST00000303383 3461 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
LRRTM1Q86UE6 KIRREL1-204ENST00000368173 7519 ntTSL 2 BASIC12.8□□□□□ -0.36
LRRTM1Q86UE6 ZBP1-201ENST00000371173 2195 ntAPPRIS P3 TSL 1 (best) BASIC12.8□□□□□ -0.36
LRRTM1Q86UE6 CAP2-209ENST00000616440 2776 ntTSL 2 BASIC12.8□□□□□ -0.36
LRRTM1Q86UE6 LRP5L-202ENST00000402859 1661 ntAPPRIS P2 TSL 5 BASIC12.8□□□□□ -0.36
LRRTM1Q86UE6 MUTYH-234ENST00000528013 1662 ntTSL 5 BASIC12.8□□□□□ -0.36
LRRTM1Q86UE6 LETMD1-206ENST00000547008 1665 ntTSL 2 BASIC12.8□□□□□ -0.36
LRRTM1Q86UE6 IKBKG-208ENST00000611176 1654 ntTSL 2 BASIC12.8□□□□□ -0.36
LRRTM1Q86UE6 ATP2B3-201ENST00000263519 6420 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
LRRTM1Q86UE6 TRMT2B-203ENST00000372939 3078 ntAPPRIS ALT2 TSL 1 (best) BASIC12.8□□□□□ -0.36
LRRTM1Q86UE6 COASY-211ENST00000590958 1976 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
LRRTM1Q86UE6 POLG-201ENST00000268124 4500 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
LRRTM1Q86UE6 DAZL-201ENST00000250863 3104 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
LRRTM1Q86UE6 SAMD15-201ENST00000216471 2564 ntAPPRIS P1 TSL 2 BASIC12.79□□□□□ -0.36
LRRTM1Q86UE6 GDAP1L1-207ENST00000612599 2585 ntTSL 3 BASIC12.79□□□□□ -0.36
LRRTM1Q86UE6 LIG1-203ENST00000536218 3179 ntAPPRIS ALT2 TSL 2 BASIC12.79□□□□□ -0.36
LRRTM1Q86UE6 FAM124B-201ENST00000243806 2030 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
LRRTM1Q86UE6 PP14571-202ENST00000404891 2017 ntTSL 2 BASIC12.79□□□□□ -0.36
LRRTM1Q86UE6 DDC-207ENST00000444124 2041 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
LRRTM1Q86UE6 MAGEA2-203ENST00000611557 2024 ntAPPRIS P1 TSL 5 BASIC12.79□□□□□ -0.36
LRRTM1Q86UE6 CNGA3-204ENST00000409937 2615 ntAPPRIS ALT2 TSL 2 BASIC12.79□□□□□ -0.36
LRRTM1Q86UE6 SPOCK3-218ENST00000511531 2908 ntAPPRIS ALT2 TSL 5 BASIC12.79□□□□□ -0.36
LRRTM1Q86UE6 TMPRSS2-201ENST00000332149 3205 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
LRRTM1Q86UE6 GTF2IRD1-205ENST00000476977 5868 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
LRRTM1Q86UE6 KLK6-203ENST00000391808 1478 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
LRRTM1Q86UE6 AGAP5-201ENST00000374094 2394 ntAPPRIS P2 TSL 1 (best) BASIC12.79□□□□□ -0.36
LRRTM1Q86UE6 PVR-205ENST00000425690 3325 ntAPPRIS P3 TSL 1 (best) BASIC12.79□□□□□ -0.36
LRRTM1Q86UE6 CSNK1A1P1-201ENST00000430593 2147 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
LRRTM1Q86UE6 SUV39H2-201ENST00000313519 3087 ntAPPRIS P3 TSL 1 (best) BASIC12.79□□□□□ -0.36
LRRTM1Q86UE6 ARMCX2-201ENST00000328766 2762 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
LRRTM1Q86UE6 SCNN1A-201ENST00000228916 3135 ntAPPRIS P3 TSL 1 (best) BASIC12.79□□□□□ -0.36
LRRTM1Q86UE6 TOM1L1-201ENST00000348161 1895 ntTSL 2 BASIC12.79□□□□□ -0.36
LRRTM1Q86UE6 FAM98B-202ENST00000397609 4388 ntAPPRIS P2 TSL 5 BASIC12.79□□□□□ -0.36
LRRTM1Q86UE6 NLRP2B-201ENST00000434992 3194 ntAPPRIS P1 BASIC12.79□□□□□ -0.36
LRRTM1Q86UE6 CCDC182-201ENST00000299415 832 ntAPPRIS P1 BASIC12.79□□□□□ -0.36
LRRTM1Q86UE6 CA4-201ENST00000300900 1154 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
LRRTM1Q86UE6 POLDIP3-202ENST00000339677 783 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
LRRTM1Q86UE6 FAM19A3-202ENST00000369630 1282 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
LRRTM1Q86UE6 PARK7-203ENST00000377491 977 ntAPPRIS P1 TSL 3 BASIC12.79□□□□□ -0.36
LRRTM1Q86UE6 AC007319.1-202ENST00000412276 829 ntTSL 5 BASIC12.79□□□□□ -0.36
LRRTM1Q86UE6 BX842568.4-201ENST00000421222 227 ntBASIC12.79□□□□□ -0.36
LRRTM1Q86UE6 AL122058.1-202ENST00000426580 252 ntTSL 3 BASIC12.79□□□□□ -0.36
LRRTM1Q86UE6 AC008278.1-201ENST00000431117 568 ntTSL 4 BASIC12.79□□□□□ -0.36
LRRTM1Q86UE6 LINC02558-202ENST00000436395 298 ntTSL 5 BASIC12.79□□□□□ -0.36
LRRTM1Q86UE6 LINC01705-201ENST00000438158 562 ntTSL 2 BASIC12.79□□□□□ -0.36
LRRTM1Q86UE6 BMP7-AS1-201ENST00000445956 436 ntTSL 2 BASIC12.79□□□□□ -0.36
LRRTM1Q86UE6 RPL13AP25-201ENST00000484130 612 ntBASIC12.79□□□□□ -0.36
LRRTM1Q86UE6 GCOM2-201ENST00000509133 1104 ntBASIC12.79□□□□□ -0.36
LRRTM1Q86UE6 MSC-AS1-206ENST00000519751 596 ntTSL 4 BASIC12.79□□□□□ -0.36
LRRTM1Q86UE6 CYB561D1-209ENST00000533024 913 ntTSL 2 BASIC12.79□□□□□ -0.36
LRRTM1Q86UE6 UBE2Q2L-201ENST00000558195 498 ntAPPRIS P1 TSL 2 BASIC12.79□□□□□ -0.36
LRRTM1Q86UE6 SORD2P-201ENST00000558556 1069 ntBASIC12.79□□□□□ -0.36
LRRTM1Q86UE6 PSMD7-204ENST00000567958 692 ntTSL 3 BASIC12.79□□□□□ -0.36
LRRTM1Q86UE6 AP002449.1-201ENST00000588211 474 ntTSL 2 BASIC12.79□□□□□ -0.36
LRRTM1Q86UE6 BRI3BPP1-201ENST00000594224 787 ntBASIC12.79□□□□□ -0.36
LRRTM1Q86UE6 UGGT2-212ENST00000621375 1004 ntTSL 5 BASIC12.79□□□□□ -0.36
LRRTM1Q86UE6 AP001002.3-201ENST00000623482 206 ntBASIC12.79□□□□□ -0.36
LRRTM1Q86UE6 AC004840.1-201ENST00000636359 365 ntBASIC12.79□□□□□ -0.36
LRRTM1Q86UE6 RIC8B-202ENST00000392837 5135 ntAPPRIS ALT2 TSL 5 BASIC12.79□□□□□ -0.36
LRRTM1Q86UE6 GAP43-202ENST00000393780 1901 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
LRRTM1Q86UE6 SETD1A-201ENST00000262519 6451 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
LRRTM1Q86UE6 ABCA2-201ENST00000265662 8154 ntAPPRIS ALT2 TSL 5 BASIC12.79□□□□□ -0.36
LRRTM1Q86UE6 APBB1-201ENST00000299402 2636 ntAPPRIS P3 TSL 5 BASIC12.79□□□□□ -0.36
LRRTM1Q86UE6 AL139193.2-201ENST00000553712 1954 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
LRRTM1Q86UE6 AURKC-203ENST00000448930 1318 ntAPPRIS ALT2 TSL 5 BASIC12.79□□□□□ -0.36
LRRTM1Q86UE6 TUBB8P4-201ENST00000511806 1324 ntBASIC12.79□□□□□ -0.36
LRRTM1Q86UE6 SAMD4A-208ENST00000555192 1337 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
LRRTM1Q86UE6 CACNA1I-202ENST00000402142 10004 ntAPPRIS P4 TSL 1 (best) BASIC12.79□□□□□ -0.36
LRRTM1Q86UE6 SLC39A8-203ENST00000424970 4032 ntTSL 2 BASIC12.79□□□□□ -0.36
LRRTM1Q86UE6 GRM1-203ENST00000361719 6754 ntAPPRIS P3 TSL 5 BASIC12.79□□□□□ -0.36
LRRTM1Q86UE6 RAPH1-213ENST00000630330 4134 ntAPPRIS ALT2 TSL 5 BASIC12.79□□□□□ -0.36
LRRTM1Q86UE6 DPYSL2-204ENST00000521913 4805 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
LRRTM1Q86UE6 LINC01792-201ENST00000452787 2050 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
LRRTM1Q86UE6 CLIC5-208ENST00000544153 2051 ntTSL 2 BASIC12.79□□□□□ -0.36
LRRTM1Q86UE6 ISY1-203ENST00000393295 3842 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
LRRTM1Q86UE6 CILP2-201ENST00000291495 4199 ntAPPRIS P2 TSL 1 (best) BASIC12.79□□□□□ -0.36
LRRTM1Q86UE6 B4GALT6-201ENST00000237019 2128 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
LRRTM1Q86UE6 KHSRPP1-201ENST00000427983 1768 ntBASIC12.79□□□□□ -0.36
LRRTM1Q86UE6 ARID4B-201ENST00000264183 4995 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
LRRTM1Q86UE6 MDM2-209ENST00000393412 1404 ntTSL 5 BASIC12.79□□□□□ -0.36
Retrieved 100 of 98,524 protein–RNA pairs in 69.3 ms