Protein–RNA interactions for Protein: Q6UXN2

TREML4, Trem-like transcript 4 protein, humanhuman

Predictions only

Length 200 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TREML4Q6UXN2 RSPH9-201ENST00000372163 2534 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
TREML4Q6UXN2 EIF4E-201ENST00000280892 1097 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
TREML4Q6UXN2 TMEM126A-201ENST00000304511 739 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
TREML4Q6UXN2 WDR3-202ENST00000369441 1035 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
TREML4Q6UXN2 DUSP13-202ENST00000372700 781 ntTSL 3 BASIC12.25□□□□□ -0.45
TREML4Q6UXN2 PEMT-203ENST00000395782 895 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
TREML4Q6UXN2 OSM-202ENST00000403389 1000 ntAPPRIS ALT2 TSL 3 BASIC12.25□□□□□ -0.45
TREML4Q6UXN2 FXNP2-201ENST00000411625 547 ntBASIC12.25□□□□□ -0.45
TREML4Q6UXN2 AL450003.2-201ENST00000450445 428 ntTSL 5 BASIC12.25□□□□□ -0.45
TREML4Q6UXN2 HRAT17-202ENST00000451962 687 ntTSL 5 BASIC12.25□□□□□ -0.45
TREML4Q6UXN2 SELENOT-203ENST00000477889 944 ntTSL 5 BASIC12.25□□□□□ -0.45
TREML4Q6UXN2 LARP7P4-201ENST00000481075 878 ntBASIC12.25□□□□□ -0.45
TREML4Q6UXN2 OARD1-212ENST00000482515 832 ntTSL 2 BASIC12.25□□□□□ -0.45
TREML4Q6UXN2 LYRM7-203ENST00000510516 604 ntTSL 2 BASIC12.25□□□□□ -0.45
TREML4Q6UXN2 AC253576.1-201ENST00000511645 1156 ntBASIC12.25□□□□□ -0.45
TREML4Q6UXN2 AC009720.1-201ENST00000511867 586 ntTSL 2 BASIC12.25□□□□□ -0.45
TREML4Q6UXN2 MTX3-202ENST00000512528 1280 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
TREML4Q6UXN2 AP003041.2-201ENST00000525666 1180 ntBASIC12.25□□□□□ -0.45
TREML4Q6UXN2 C11orf98-202ENST00000525675 405 ntTSL 2 BASIC12.25□□□□□ -0.45
TREML4Q6UXN2 ZNF7-206ENST00000528130 1134 ntTSL 5 BASIC12.25□□□□□ -0.45
TREML4Q6UXN2 AC100858.3-202ENST00000533496 553 ntTSL 4 BASIC12.25□□□□□ -0.45
TREML4Q6UXN2 FKBP5-203ENST00000539068 3827 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
TREML4Q6UXN2 G2E3-AS1-204ENST00000552511 402 ntTSL 2 BASIC12.25□□□□□ -0.45
TREML4Q6UXN2 ETFRF1-208ENST00000556402 874 ntTSL 3 BASIC12.25□□□□□ -0.45
TREML4Q6UXN2 AL359711.2-201ENST00000563105 872 ntBASIC12.25□□□□□ -0.45
TREML4Q6UXN2 DUX4L45-201ENST00000566406 1057 ntBASIC12.25□□□□□ -0.45
TREML4Q6UXN2 HAUS2-207ENST00000568846 709 ntTSL 3 BASIC12.25□□□□□ -0.45
TREML4Q6UXN2 MTND4LP25-201ENST00000570218 163 ntBASIC12.25□□□□□ -0.45
TREML4Q6UXN2 AP005121.2-201ENST00000583306 1101 ntBASIC12.25□□□□□ -0.45
TREML4Q6UXN2 TUBB6-213ENST00000591909 1017 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
TREML4Q6UXN2 AC016629.1-201ENST00000596579 586 ntBASIC12.25□□□□□ -0.45
TREML4Q6UXN2 STARD13-AS-240ENST00000609608 865 ntTSL 5 BASIC12.25□□□□□ -0.45
TREML4Q6UXN2 Metazoa_SRP.166-201ENST00000612530 253 ntBASIC12.25□□□□□ -0.45
TREML4Q6UXN2 FDPS-221ENST00000612683 1198 ntAPPRIS ALT1 TSL 5 BASIC12.25□□□□□ -0.45
TREML4Q6UXN2 CR381653.1-201ENST00000622961 812 ntTSL 3 BASIC12.25□□□□□ -0.45
TREML4Q6UXN2 RHOXF1P1-202ENST00000635473 501 ntBASIC12.25□□□□□ -0.45
TREML4Q6UXN2 FDFT1-202ENST00000443614 1393 ntTSL 2 BASIC12.25□□□□□ -0.45
TREML4Q6UXN2 HNRNPA1P48-201ENST00000562726 1377 ntBASIC12.25□□□□□ -0.45
TREML4Q6UXN2 GLMP-213ENST00000612353 1365 ntAPPRIS ALT2 TSL 5 BASIC12.25□□□□□ -0.45
TREML4Q6UXN2 GLMP-215ENST00000622703 1364 ntAPPRIS ALT2 TSL 2 BASIC12.25□□□□□ -0.45
TREML4Q6UXN2 VIPAS39-202ENST00000343765 2761 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
TREML4Q6UXN2 ST20-AS1-201ENST00000560255 4223 ntBASIC12.25□□□□□ -0.45
TREML4Q6UXN2 HARS2-202ENST00000448069 1426 ntTSL 2 BASIC12.25□□□□□ -0.45
TREML4Q6UXN2 NTRK2-201ENST00000277120 8633 ntAPPRIS P3 TSL 1 (best) BASIC12.25□□□□□ -0.45
TREML4Q6UXN2 CPA1-201ENST00000011292 1487 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
TREML4Q6UXN2 CES4A-203ENST00000535696 1472 ntTSL 2 BASIC12.25□□□□□ -0.45
TREML4Q6UXN2 MAP2K6-209ENST00000613873 1509 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
TREML4Q6UXN2 MRFAP1-202ENST00000382581 1584 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
TREML4Q6UXN2 ZNF683-201ENST00000349618 1610 ntAPPRIS P3 TSL 1 (best) BASIC12.25□□□□□ -0.45
TREML4Q6UXN2 SNPH-202ENST00000381873 4995 ntAPPRIS P3 TSL 1 (best) BASIC12.25□□□□□ -0.45
TREML4Q6UXN2 CASQ1-201ENST00000368078 1897 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
TREML4Q6UXN2 MUC20-201ENST00000320736 1916 ntAPPRIS ALT2 TSL 5 BASIC12.25□□□□□ -0.45
TREML4Q6UXN2 AGPS-201ENST00000264167 7764 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
TREML4Q6UXN2 EVL-201ENST00000392920 1978 ntAPPRIS P3 TSL 1 (best) BASIC12.25□□□□□ -0.45
TREML4Q6UXN2 ZNF587-203ENST00000423137 1974 ntAPPRIS ALT2 TSL 1 (best) BASIC12.25□□□□□ -0.45
TREML4Q6UXN2 AC011455.3-201ENST00000599996 1967 ntAPPRIS P1 TSL 2 BASIC12.25□□□□□ -0.45
TREML4Q6UXN2 FUK-201ENST00000288078 4081 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
TREML4Q6UXN2 UCK1-203ENST00000372211 2114 ntTSL 3 BASIC12.25□□□□□ -0.45
TREML4Q6UXN2 LAP3-211ENST00000618908 2100 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
TREML4Q6UXN2 SEC16A-202ENST00000290037 8982 ntAPPRIS ALT2 TSL 1 (best) BASIC12.25□□□□□ -0.45
TREML4Q6UXN2 PCDHB14-201ENST00000239449 4828 ntAPPRIS P1 BASIC12.25□□□□□ -0.45
TREML4Q6UXN2 ADAM23-202ENST00000374415 2714 ntAPPRIS ALT1 TSL 5 BASIC12.24□□□□□ -0.45
TREML4Q6UXN2 NCOR2-203ENST00000404621 8520 ntAPPRIS ALT2 TSL 1 (best) BASIC12.24□□□□□ -0.45
TREML4Q6UXN2 JARID2-201ENST00000341776 5755 ntAPPRIS P3 TSL 1 (best) BASIC12.24□□□□□ -0.45
TREML4Q6UXN2 AMACR-203ENST00000382072 2919 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
TREML4Q6UXN2 SLC4A7-210ENST00000440156 4120 ntAPPRIS ALT2 TSL 1 (best) BASIC12.24□□□□□ -0.45
TREML4Q6UXN2 OCEL1-201ENST00000215061 1133 ntAPPRIS P2 TSL 1 (best) BASIC12.24□□□□□ -0.45
TREML4Q6UXN2 MIOX-201ENST00000216075 1130 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
TREML4Q6UXN2 GAD2-201ENST00000259271 2462 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
TREML4Q6UXN2 ZNF711-201ENST00000276123 2887 ntAPPRIS P3 TSL 1 (best) BASIC12.24□□□□□ -0.45
TREML4Q6UXN2 CRABP1-201ENST00000299529 772 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
TREML4Q6UXN2 COL6A2-202ENST00000310645 3446 ntTSL 5 BASIC12.24□□□□□ -0.45
TREML4Q6UXN2 MUC1-202ENST00000338684 1107 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
TREML4Q6UXN2 CYTH3-201ENST00000350796 4505 ntAPPRIS P2 TSL 1 (best) BASIC12.24□□□□□ -0.45
TREML4Q6UXN2 ATP2A3-202ENST00000352011 3274 ntTSL 5 BASIC12.24□□□□□ -0.45
TREML4Q6UXN2 COA4-201ENST00000355693 960 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
TREML4Q6UXN2 TCEAL8-201ENST00000360000 1131 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
TREML4Q6UXN2 CYB561-201ENST00000360793 3001 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
TREML4Q6UXN2 AL022323.1-201ENST00000366110 957 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
TREML4Q6UXN2 CIART-203ENST00000369095 1433 ntAPPRIS P3 TSL 1 (best) BASIC12.24□□□□□ -0.45
TREML4Q6UXN2 TAF8-203ENST00000372982 1805 ntTSL 2 BASIC12.24□□□□□ -0.45
TREML4Q6UXN2 UBXN11-206ENST00000374222 2043 ntAPPRIS P4 TSL 5 BASIC12.24□□□□□ -0.45
TREML4Q6UXN2 RASGEF1A-204ENST00000395810 3235 ntAPPRIS P3 TSL 1 (best) BASIC12.24□□□□□ -0.45
TREML4Q6UXN2 KNCN-202ENST00000396314 608 ntAPPRIS P3 TSL 4 BASIC12.24□□□□□ -0.45
TREML4Q6UXN2 CYTH3-202ENST00000396741 4508 ntAPPRIS ALT1 TSL 5 BASIC12.24□□□□□ -0.45
TREML4Q6UXN2 KLHDC7A-201ENST00000400664 5145 ntAPPRIS P1 BASIC12.24□□□□□ -0.45
TREML4Q6UXN2 MTCO2P31-201ENST00000402702 684 ntBASIC12.24□□□□□ -0.45
TREML4Q6UXN2 AAK1-202ENST00000409068 2606 ntTSL 2 BASIC12.24□□□□□ -0.45
TREML4Q6UXN2 NUS1P3-201ENST00000423502 862 ntBASIC12.24□□□□□ -0.45
TREML4Q6UXN2 AC073133.1-201ENST00000426187 432 ntTSL 3 BASIC12.24□□□□□ -0.45
TREML4Q6UXN2 AL845321.1-202ENST00000432011 786 ntTSL 5 BASIC12.24□□□□□ -0.45
TREML4Q6UXN2 AP001627.1-201ENST00000437426 1754 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
TREML4Q6UXN2 MTND4P25-201ENST00000441039 533 ntBASIC12.24□□□□□ -0.45
TREML4Q6UXN2 CGB8-201ENST00000448456 882 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
TREML4Q6UXN2 MUC1-218ENST00000471283 635 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
TREML4Q6UXN2 LINC00888-202ENST00000471496 1490 ntTSL 3 BASIC12.24□□□□□ -0.45
TREML4Q6UXN2 RPARP-AS1-201ENST00000473970 1297 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
TREML4Q6UXN2 FTH1P14-201ENST00000482930 551 ntBASIC12.24□□□□□ -0.45
TREML4Q6UXN2 ATP2C1-214ENST00000508532 4969 ntAPPRIS ALT1 TSL 1 (best) BASIC12.24□□□□□ -0.45
TREML4Q6UXN2 AC012531.2-201ENST00000512206 1389 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
Retrieved 100 of 98,524 protein–RNA pairs in 55 ms