Protein–RNA interactions for Protein: Q6PIV2

FOXR1, Forkhead box protein R1, humanhuman

Predictions only

Length 292 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FOXR1Q6PIV2 C18orf25-203ENST00000615052 5462 ntAPPRIS P1 TSL 5 BASIC15.43■□□□□ 0.06
FOXR1Q6PIV2 SRC-202ENST00000373558 4304 ntTSL 5 BASIC15.43■□□□□ 0.06
FOXR1Q6PIV2 KIF26B-202ENST00000407071 7287 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
FOXR1Q6PIV2 MKNK1-204ENST00000371946 2719 ntTSL 1 (best) BASIC15.43■□□□□ 0.06
FOXR1Q6PIV2 SRPRB-201ENST00000466490 2827 ntAPPRIS P1 TSL 5 BASIC15.43■□□□□ 0.06
FOXR1Q6PIV2 CPEB3-201ENST00000265997 4851 ntAPPRIS P3 TSL 1 (best) BASIC15.43■□□□□ 0.06
FOXR1Q6PIV2 DKKL1-201ENST00000221498 1222 ntAPPRIS P2 TSL 1 (best) BASIC15.43■□□□□ 0.06
FOXR1Q6PIV2 H1FOO-201ENST00000324382 1067 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
FOXR1Q6PIV2 PRAF2-201ENST00000376386 801 ntTSL 2 BASIC15.43■□□□□ 0.06
FOXR1Q6PIV2 ESPNP-202ENST00000414828 571 ntTSL 3 BASIC15.43■□□□□ 0.06
FOXR1Q6PIV2 AC098850.1-201ENST00000419919 790 ntBASIC15.43■□□□□ 0.06
FOXR1Q6PIV2 AL161785.3-201ENST00000435157 395 ntTSL 3 BASIC15.43■□□□□ 0.06
FOXR1Q6PIV2 AC140481.1-201ENST00000448777 706 ntTSL 3 BASIC15.43■□□□□ 0.06
FOXR1Q6PIV2 TMEM191A-209ENST00000452055 788 ntTSL 2 BASIC15.43■□□□□ 0.06
FOXR1Q6PIV2 AL356441.1-201ENST00000452618 492 ntTSL 3 BASIC15.43■□□□□ 0.06
FOXR1Q6PIV2 NUTM2A-AS1-212ENST00000458739 733 ntTSL 1 (best) BASIC15.43■□□□□ 0.06
FOXR1Q6PIV2 SLC30A5-203ENST00000502979 681 ntTSL 1 (best) BASIC15.43■□□□□ 0.06
FOXR1Q6PIV2 GLI4-203ENST00000517468 963 ntTSL 5 BASIC15.43■□□□□ 0.06
FOXR1Q6PIV2 TPD52L1-214ENST00000534199 811 ntTSL 2 BASIC15.43■□□□□ 0.06
FOXR1Q6PIV2 IL32-232ENST00000552356 623 ntAPPRIS ALT2 TSL 3 BASIC15.43■□□□□ 0.06
FOXR1Q6PIV2 NDUFS7-218ENST00000618074 688 ntTSL 5 BASIC15.43■□□□□ 0.06
FOXR1Q6PIV2 CLK3P2-201ENST00000427566 1453 ntBASIC15.43■□□□□ 0.06
FOXR1Q6PIV2 BNIP3P1-202ENST00000550043 1585 ntBASIC15.43■□□□□ 0.06
FOXR1Q6PIV2 TLX1NB-202ENST00000445873 1862 ntTSL 1 (best) BASIC15.43■□□□□ 0.06
FOXR1Q6PIV2 CAPN14-202ENST00000403897 2197 ntAPPRIS P1 TSL 2 BASIC15.43■□□□□ 0.06
FOXR1Q6PIV2 LINC01257-201ENST00000376678 2473 ntTSL 1 (best) BASIC15.43■□□□□ 0.06
FOXR1Q6PIV2 AC111170.3-201ENST00000624282 2464 ntBASIC15.43■□□□□ 0.06
FOXR1Q6PIV2 TRHDE-AS1-201ENST00000426250 3684 ntTSL 5 BASIC15.43■□□□□ 0.06
FOXR1Q6PIV2 KIF7-201ENST00000394412 4551 ntAPPRIS P1 TSL 5 BASIC15.43■□□□□ 0.06
FOXR1Q6PIV2 CAMKK2-201ENST00000324774 5598 ntAPPRIS P4 TSL 1 (best) BASIC15.43■□□□□ 0.06
FOXR1Q6PIV2 FBLN2-203ENST00000404922 4318 ntAPPRIS P4 TSL 5 BASIC15.43■□□□□ 0.06
FOXR1Q6PIV2 PDE2A-218ENST00000540345 3027 ntTSL 1 (best) BASIC15.43■□□□□ 0.06
FOXR1Q6PIV2 RS1-201ENST00000379984 2810 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
FOXR1Q6PIV2 RAB37-205ENST00000392614 2704 ntAPPRIS ALT2 TSL 2 BASIC15.43■□□□□ 0.06
FOXR1Q6PIV2 LPO-203ENST00000421678 2729 ntAPPRIS ALT2 TSL 1 (best) BASIC15.43■□□□□ 0.06
FOXR1Q6PIV2 REC8-213ENST00000620473 2405 ntAPPRIS P1 TSL 2 BASIC15.43■□□□□ 0.06
FOXR1Q6PIV2 GAP43-202ENST00000393780 1901 ntTSL 1 (best) BASIC15.43■□□□□ 0.06
FOXR1Q6PIV2 CRTC2-202ENST00000368630 1635 ntTSL 2 BASIC15.43■□□□□ 0.06
FOXR1Q6PIV2 SIGLEC8-203ENST00000430817 1528 ntTSL 2 BASIC15.43■□□□□ 0.06
FOXR1Q6PIV2 BCS1L-205ENST00000412366 1430 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
FOXR1Q6PIV2 UBA6-AS1-201ENST00000498917 1445 ntTSL 1 (best) BASIC15.43■□□□□ 0.06
FOXR1Q6PIV2 TESMIN-204ENST00000443940 3495 ntTSL 2 BASIC15.42■□□□□ 0.06
FOXR1Q6PIV2 AP002761.4-201ENST00000565433 3361 ntBASIC15.42■□□□□ 0.06
FOXR1Q6PIV2 DCAF6-201ENST00000312263 3186 ntAPPRIS ALT2 TSL 1 (best) BASIC15.42■□□□□ 0.06
FOXR1Q6PIV2 RAB11FIP1-206ENST00000524118 1959 ntTSL 1 (best) BASIC15.42■□□□□ 0.06
FOXR1Q6PIV2 RPTOR-202ENST00000544334 5734 ntTSL 5 BASIC15.42■□□□□ 0.06
FOXR1Q6PIV2 CICP1-201ENST00000416803 2410 ntBASIC15.42■□□□□ 0.06
FOXR1Q6PIV2 KLK15-201ENST00000326856 1389 ntAPPRIS ALT1 TSL 5 BASIC15.42■□□□□ 0.06
FOXR1Q6PIV2 HELLS-202ENST00000348459 3099 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
FOXR1Q6PIV2 MRPL55-202ENST00000336300 722 ntAPPRIS P1 TSL 2 BASIC15.42■□□□□ 0.06
FOXR1Q6PIV2 SNURF-201ENST00000338327 331 ntAPPRIS P1 TSL 5 BASIC15.42■□□□□ 0.06
FOXR1Q6PIV2 MRPL55-206ENST00000366732 722 ntTSL 3 BASIC15.42■□□□□ 0.06
FOXR1Q6PIV2 IFITM3-201ENST00000399808 808 ntAPPRIS P2 TSL 1 (best) BASIC15.42■□□□□ 0.06
FOXR1Q6PIV2 AL133456.1-201ENST00000415655 577 ntTSL 4 BASIC15.42■□□□□ 0.06
FOXR1Q6PIV2 AL034550.1-201ENST00000442179 986 ntTSL 1 (best) BASIC15.42■□□□□ 0.06
FOXR1Q6PIV2 MPZL1-209ENST00000474859 630 ntTSL 1 (best) BASIC15.42■□□□□ 0.06
FOXR1Q6PIV2 CHMP2B-205ENST00000494980 1175 ntTSL 3 BASIC15.42■□□□□ 0.06
FOXR1Q6PIV2 ZNF721-205ENST00000511833 2966 ntAPPRIS P1 TSL 4 BASIC15.42■□□□□ 0.06
FOXR1Q6PIV2 AC092552.1-201ENST00000547243 906 ntBASIC15.42■□□□□ 0.06
FOXR1Q6PIV2 C12orf10-204ENST00000548632 988 ntTSL 1 (best) BASIC15.42■□□□□ 0.06
FOXR1Q6PIV2 LINC01975-201ENST00000571890 549 ntTSL 4 BASIC15.42■□□□□ 0.06
FOXR1Q6PIV2 APOC4-201ENST00000591600 348 ntTSL 3 BASIC15.42■□□□□ 0.06
FOXR1Q6PIV2 ELOF1-208ENST00000591912 899 ntTSL 5 BASIC15.42■□□□□ 0.06
FOXR1Q6PIV2 AC093726.1-201ENST00000608064 963 ntBASIC15.42■□□□□ 0.06
FOXR1Q6PIV2 TPCN1-214ENST00000550785 5345 ntTSL 2 BASIC15.42■□□□□ 0.06
FOXR1Q6PIV2 MUC20-201ENST00000320736 1916 ntAPPRIS ALT2 TSL 5 BASIC15.42■□□□□ 0.06
FOXR1Q6PIV2 SLC44A3-206ENST00000527077 1943 ntTSL 2 BASIC15.42■□□□□ 0.06
FOXR1Q6PIV2 PLEKHA8P1-201ENST00000256692 1839 ntTSL 1 (best) BASIC15.42■□□□□ 0.06
FOXR1Q6PIV2 DDHD2-205ENST00000520272 4532 ntAPPRIS P1 TSL 2 BASIC15.42■□□□□ 0.06
FOXR1Q6PIV2 SDC2-201ENST00000302190 3759 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
FOXR1Q6PIV2 CCDC13-201ENST00000310232 2943 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
FOXR1Q6PIV2 NDFIP2-201ENST00000218652 4625 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
FOXR1Q6PIV2 SIGLEC9-201ENST00000250360 1690 ntAPPRIS P3 TSL 1 (best) BASIC15.41■□□□□ 0.06
FOXR1Q6PIV2 INMT-201ENST00000013222 2559 ntAPPRIS P3 TSL 1 (best) BASIC15.41■□□□□ 0.06
FOXR1Q6PIV2 F2-201ENST00000311907 2023 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
FOXR1Q6PIV2 SNED1-202ENST00000342631 1930 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
FOXR1Q6PIV2 SCAF11-204ENST00000395454 1931 ntAPPRIS ALT2 TSL 1 (best) BASIC15.41■□□□□ 0.06
FOXR1Q6PIV2 ZNF32-AS3-201ENST00000458063 1932 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
FOXR1Q6PIV2 TSFM-207ENST00000540550 1935 ntTSL 2 BASIC15.41■□□□□ 0.06
FOXR1Q6PIV2 NFATC4-206ENST00000539237 5686 ntAPPRIS ALT2 TSL 1 (best) BASIC15.41■□□□□ 0.06
FOXR1Q6PIV2 SLC9A7-205ENST00000616978 10024 ntAPPRIS ALT2 TSL 1 (best) BASIC15.41■□□□□ 0.06
FOXR1Q6PIV2 DNAJA4-206ENST00000446172 1399 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
FOXR1Q6PIV2 CAMK2B-217ENST00000457475 4142 ntTSL 5 BASIC15.41■□□□□ 0.06
FOXR1Q6PIV2 SNAP47-AS1-201ENST00000413347 1708 ntTSL 2 BASIC15.41■□□□□ 0.06
FOXR1Q6PIV2 SPAG7-201ENST00000206020 1058 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
FOXR1Q6PIV2 FTH1-201ENST00000273550 1229 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
FOXR1Q6PIV2 MRPL13-201ENST00000306185 1086 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
FOXR1Q6PIV2 SPATC1L-202ENST00000330205 1182 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
FOXR1Q6PIV2 BEX3-203ENST00000372635 805 ntAPPRIS P1 TSL 2 BASIC15.41■□□□□ 0.06
FOXR1Q6PIV2 SDHB-201ENST00000375499 1153 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
FOXR1Q6PIV2 UCHL3-201ENST00000377595 844 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
FOXR1Q6PIV2 RPL28-204ENST00000431533 590 ntTSL 2 BASIC15.41■□□□□ 0.06
FOXR1Q6PIV2 ZNF589-204ENST00000440261 917 ntTSL 2 BASIC15.41■□□□□ 0.06
FOXR1Q6PIV2 RNF216P1-213ENST00000494947 946 ntTSL 2 BASIC15.41■□□□□ 0.06
FOXR1Q6PIV2 AC104596.2-201ENST00000512793 793 ntBASIC15.41■□□□□ 0.06
FOXR1Q6PIV2 FADS2-205ENST00000517839 469 ntTSL 3 BASIC15.41■□□□□ 0.06
FOXR1Q6PIV2 FTH1-202ENST00000526640 786 ntTSL 2 BASIC15.41■□□□□ 0.06
FOXR1Q6PIV2 RPL28-206ENST00000558752 671 ntTSL 3 BASIC15.41■□□□□ 0.06
FOXR1Q6PIV2 AC011499.1-201ENST00000586012 581 ntAPPRIS P1 TSL 3 BASIC15.41■□□□□ 0.06
FOXR1Q6PIV2 KLK15-204ENST00000598239 855 ntAPPRIS P3 TSL 1 (best) BASIC15.41■□□□□ 0.06
Retrieved 100 of 98,524 protein–RNA pairs in 36.2 ms