Protein–RNA interactions for Protein: Q5T6M2

LINC00242, Putative uncharacterized protein encoded by LINC00242, humanhuman

Predictions only

Length 205 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00242Q5T6M2 NACC2-202ENST00000371753 6802 ntAPPRIS P1 TSL 1 (best) BASIC10.09□□□□□ -0.79
LINC00242Q5T6M2 DMTN-214ENST00000519907 2658 ntTSL 5 BASIC10.09□□□□□ -0.79
LINC00242Q5T6M2 AC015802.6-201ENST00000640006 5654 ntAPPRIS P1 TSL 2 BASIC10.09□□□□□ -0.79
LINC00242Q5T6M2 MSTO1-202ENST00000368341 2245 ntTSL 2 BASIC10.09□□□□□ -0.79
LINC00242Q5T6M2 UQCC1-204ENST00000374384 2201 ntTSL 2 BASIC10.09□□□□□ -0.79
LINC00242Q5T6M2 CAP2-209ENST00000616440 2776 ntTSL 2 BASIC10.09□□□□□ -0.79
LINC00242Q5T6M2 CD68-202ENST00000380498 1771 ntAPPRIS ALT2 TSL 1 (best) BASIC10.09□□□□□ -0.79
LINC00242Q5T6M2 ITGA6-202ENST00000409080 5306 ntTSL 2 BASIC10.09□□□□□ -0.79
LINC00242Q5T6M2 ZDHHC19-201ENST00000296326 1306 ntAPPRIS P1 TSL 5 BASIC10.08□□□□□ -0.8
LINC00242Q5T6M2 STAM2-201ENST00000263904 5701 ntAPPRIS P1 TSL 1 (best) BASIC10.08□□□□□ -0.8
LINC00242Q5T6M2 TP73-211ENST00000604074 4806 ntTSL 5 BASIC10.08□□□□□ -0.8
LINC00242Q5T6M2 APBB1-201ENST00000299402 2636 ntAPPRIS P3 TSL 5 BASIC10.08□□□□□ -0.8
LINC00242Q5T6M2 ATN1-201ENST00000356654 4351 ntAPPRIS P1 TSL 1 (best) BASIC10.08□□□□□ -0.8
LINC00242Q5T6M2 MIR497HG-202ENST00000572453 3838 ntBASIC10.08□□□□□ -0.8
LINC00242Q5T6M2 ERICH6-201ENST00000295910 2052 ntAPPRIS P3 TSL 1 (best) BASIC10.08□□□□□ -0.8
LINC00242Q5T6M2 RFESD-201ENST00000311364 2722 ntAPPRIS P1 TSL 1 (best) BASIC10.08□□□□□ -0.8
LINC00242Q5T6M2 SNHG22-201ENST00000589499 1615 ntTSL 2 BASIC10.08□□□□□ -0.8
LINC00242Q5T6M2 MEX3B-202ENST00000558133 4333 ntBASIC10.08□□□□□ -0.8
LINC00242Q5T6M2 SUOX-204ENST00000394115 2394 ntAPPRIS P1 TSL 2 BASIC10.08□□□□□ -0.8
LINC00242Q5T6M2 SELPLG-201ENST00000228463 1704 ntAPPRIS ALT2 TSL 2 BASIC10.08□□□□□ -0.8
LINC00242Q5T6M2 RP1L1-202ENST00000382483 7973 ntAPPRIS P1 TSL 1 (best) BASIC10.08□□□□□ -0.8
LINC00242Q5T6M2 SCNN1A-201ENST00000228916 3135 ntAPPRIS P3 TSL 1 (best) BASIC10.08□□□□□ -0.8
LINC00242Q5T6M2 PLEKHB2-205ENST00000409279 2488 ntAPPRIS ALT1 TSL 2 BASIC10.08□□□□□ -0.8
LINC00242Q5T6M2 MYO1C-218ENST00000575158 4804 ntAPPRIS P3 TSL 5 BASIC10.08□□□□□ -0.8
LINC00242Q5T6M2 HGNC:18790-201ENST00000397958 2650 ntAPPRIS P1 TSL 2 BASIC10.08□□□□□ -0.8
LINC00242Q5T6M2 TRDMT1-203ENST00000377799 3527 ntAPPRIS P1 TSL 1 (best) BASIC10.08□□□□□ -0.8
LINC00242Q5T6M2 NOP58-201ENST00000264279 2046 ntAPPRIS P1 TSL 1 (best) BASIC10.08□□□□□ -0.8
LINC00242Q5T6M2 LMNA-213ENST00000473598 2015 ntTSL 2 BASIC10.08□□□□□ -0.8
LINC00242Q5T6M2 MIOX-201ENST00000216075 1130 ntAPPRIS P1 TSL 1 (best) BASIC10.08□□□□□ -0.8
LINC00242Q5T6M2 RPS15-201ENST00000233609 534 ntTSL 2 BASIC10.08□□□□□ -0.8
LINC00242Q5T6M2 HCST-201ENST00000246551 613 ntAPPRIS P3 TSL 1 (best) BASIC10.08□□□□□ -0.8
LINC00242Q5T6M2 TMEM205-201ENST00000354882 1034 ntAPPRIS P1 TSL 1 (best) BASIC10.08□□□□□ -0.8
LINC00242Q5T6M2 TAF8-202ENST00000372978 794 ntTSL 1 (best) BASIC10.08□□□□□ -0.8
LINC00242Q5T6M2 HDAC8-203ENST00000373559 632 ntTSL 2 BASIC10.08□□□□□ -0.8
LINC00242Q5T6M2 HDAC8-208ENST00000373583 434 ntTSL 5 BASIC10.08□□□□□ -0.8
LINC00242Q5T6M2 RABL2A-203ENST00000393166 1052 ntAPPRIS P3 TSL 1 (best) BASIC10.08□□□□□ -0.8
LINC00242Q5T6M2 CRYAA-203ENST00000398133 600 ntTSL 3 BASIC10.08□□□□□ -0.8
LINC00242Q5T6M2 KRT18P13-201ENST00000400056 1290 ntBASIC10.08□□□□□ -0.8
LINC00242Q5T6M2 HNRNPA3P1-201ENST00000401429 1139 ntBASIC10.08□□□□□ -0.8
LINC00242Q5T6M2 AC254562.1-201ENST00000417586 456 ntBASIC10.08□□□□□ -0.8
LINC00242Q5T6M2 TREX1-201ENST00000433541 1105 ntTSL 1 (best) BASIC10.08□□□□□ -0.8
LINC00242Q5T6M2 HNRNPA3P5-201ENST00000455201 833 ntBASIC10.08□□□□□ -0.8
LINC00242Q5T6M2 XXYLT1-AS1-201ENST00000458531 431 ntTSL 3 BASIC10.08□□□□□ -0.8
LINC00242Q5T6M2 HLA-J-203ENST00000494367 1087 ntBASIC10.08□□□□□ -0.8
LINC00242Q5T6M2 AC131206.1-201ENST00000538078 1211 ntBASIC10.08□□□□□ -0.8
LINC00242Q5T6M2 LYSMD2-204ENST00000560491 1026 ntTSL 3 BASIC10.08□□□□□ -0.8
LINC00242Q5T6M2 HAGH-208ENST00000566709 1291 ntTSL 5 BASIC10.08□□□□□ -0.8
LINC00242Q5T6M2 AC116003.1-201ENST00000578340 536 ntTSL 3 BASIC10.08□□□□□ -0.8
LINC00242Q5T6M2 TMEM205-205ENST00000586590 677 ntAPPRIS P1 TSL 5 BASIC10.08□□□□□ -0.8
LINC00242Q5T6M2 RPS15-205ENST00000586686 562 ntTSL 5 BASIC10.08□□□□□ -0.8
LINC00242Q5T6M2 TMEM205-207ENST00000586956 1003 ntAPPRIS P1 TSL 2 BASIC10.08□□□□□ -0.8
LINC00242Q5T6M2 AC010327.4-202ENST00000591484 748 ntBASIC10.08□□□□□ -0.8
LINC00242Q5T6M2 RPS15-208ENST00000591804 711 ntTSL 5 BASIC10.08□□□□□ -0.8
LINC00242Q5T6M2 RPS15-209ENST00000592588 510 ntAPPRIS P2 TSL 1 (best) BASIC10.08□□□□□ -0.8
LINC00242Q5T6M2 LINC01515-215ENST00000608678 854 ntTSL 5 BASIC10.08□□□□□ -0.8
LINC00242Q5T6M2 AL662799.1-202ENST00000614205 422 ntBASIC10.08□□□□□ -0.8
LINC00242Q5T6M2 UGGT2-212ENST00000621375 1004 ntTSL 5 BASIC10.08□□□□□ -0.8
LINC00242Q5T6M2 FP236240.1-202ENST00000624019 601 ntTSL 3 BASIC10.08□□□□□ -0.8
LINC00242Q5T6M2 TUBGCP6-201ENST00000248846 5612 ntAPPRIS P1 TSL 1 (best) BASIC10.08□□□□□ -0.8
LINC00242Q5T6M2 TRMT2B-203ENST00000372939 3078 ntAPPRIS ALT2 TSL 1 (best) BASIC10.08□□□□□ -0.8
LINC00242Q5T6M2 AL356258.1-201ENST00000605929 2246 ntTSL 2 BASIC10.08□□□□□ -0.8
LINC00242Q5T6M2 GRM1-203ENST00000361719 6754 ntAPPRIS P3 TSL 5 BASIC10.08□□□□□ -0.8
LINC00242Q5T6M2 LINC01725-203ENST00000417975 3177 ntTSL 1 (best) BASIC10.08□□□□□ -0.8
LINC00242Q5T6M2 STK26-202ENST00000394334 3288 ntAPPRIS P1 TSL 1 (best) BASIC10.08□□□□□ -0.8
LINC00242Q5T6M2 ADCY8-202ENST00000377928 3363 ntTSL 1 (best) BASIC10.08□□□□□ -0.8
LINC00242Q5T6M2 VWA8-201ENST00000281496 3475 ntTSL 1 (best) BASIC10.08□□□□□ -0.8
LINC00242Q5T6M2 GPR88-201ENST00000315033 3491 ntAPPRIS P1 TSL 1 (best) BASIC10.08□□□□□ -0.8
LINC00242Q5T6M2 CPNE5-202ENST00000393189 2542 ntTSL 1 (best) BASIC10.08□□□□□ -0.8
LINC00242Q5T6M2 LRP5L-202ENST00000402859 1661 ntAPPRIS P2 TSL 5 BASIC10.08□□□□□ -0.8
LINC00242Q5T6M2 KDM8-212ENST00000568965 1655 ntTSL 1 (best) BASIC10.08□□□□□ -0.8
LINC00242Q5T6M2 AC114271.1-201ENST00000612689 2813 ntBASIC10.08□□□□□ -0.8
LINC00242Q5T6M2 SMOC2-202ENST00000356284 3117 ntAPPRIS P1 TSL 1 (best) BASIC10.08□□□□□ -0.8
LINC00242Q5T6M2 AC015712.2-202ENST00000560068 3213 ntTSL 1 (best) BASIC10.08□□□□□ -0.8
LINC00242Q5T6M2 SPG11-210ENST00000558319 6426 ntAPPRIS ALT2 TSL 5 BASIC10.08□□□□□ -0.8
LINC00242Q5T6M2 GNAS-213ENST00000371099 3709 ntTSL 5 BASIC10.08□□□□□ -0.8
LINC00242Q5T6M2 CALCOCO1-218ENST00000550804 2291 ntAPPRIS P2 TSL 1 (best) BASIC10.08□□□□□ -0.8
LINC00242Q5T6M2 UACA-201ENST00000322954 6939 ntAPPRIS P3 TSL 1 (best) BASIC10.08□□□□□ -0.8
LINC00242Q5T6M2 C19orf57-204ENST00000586783 2454 ntAPPRIS ALT2 TSL 5 BASIC10.08□□□□□ -0.8
LINC00242Q5T6M2 PAK3-208ENST00000446737 2550 ntAPPRIS P3 TSL 1 (best) BASIC10.08□□□□□ -0.8
LINC00242Q5T6M2 GIPC3-201ENST00000322315 4335 ntAPPRIS P1 TSL 1 (best) BASIC10.08□□□□□ -0.8
LINC00242Q5T6M2 SH3TC2-202ENST00000502274 2681 ntTSL 2 BASIC10.08□□□□□ -0.8
LINC00242Q5T6M2 SPHK2-201ENST00000245222 2963 ntAPPRIS P3 TSL 1 (best) BASIC10.08□□□□□ -0.8
LINC00242Q5T6M2 LINC00863-201ENST00000439559 3287 ntTSL 5 BASIC10.08□□□□□ -0.8
LINC00242Q5T6M2 HSP90AA1-201ENST00000216281 3379 ntAPPRIS P1 TSL 1 (best) BASIC10.08□□□□□ -0.8
LINC00242Q5T6M2 SLC35G1-201ENST00000371408 3490 ntAPPRIS P3 TSL 2 BASIC10.08□□□□□ -0.8
LINC00242Q5T6M2 MUC1-223ENST00000611571 4170 ntAPPRIS ALT2 TSL 5 BASIC10.07□□□□□ -0.8
LINC00242Q5T6M2 ESRRB-207ENST00000556177 1427 ntAPPRIS P1 TSL 1 (best) BASIC10.07□□□□□ -0.8
LINC00242Q5T6M2 CYB561D2-202ENST00000418577 1533 ntAPPRIS P1 TSL 2 BASIC10.07□□□□□ -0.8
LINC00242Q5T6M2 NXPH3-202ENST00000513748 1530 ntTSL 1 (best) BASIC10.07□□□□□ -0.8
LINC00242Q5T6M2 HIF3A-206ENST00000472815 1709 ntTSL 2 BASIC10.07□□□□□ -0.8
LINC00242Q5T6M2 MAGEA2-203ENST00000611557 2024 ntAPPRIS P1 TSL 5 BASIC10.07□□□□□ -0.8
LINC00242Q5T6M2 DSN1-207ENST00000448110 2129 ntAPPRIS ALT2 TSL 2 BASIC10.07□□□□□ -0.8
LINC00242Q5T6M2 ABCA2-201ENST00000265662 8154 ntAPPRIS ALT2 TSL 5 BASIC10.07□□□□□ -0.8
LINC00242Q5T6M2 ACSM2A-202ENST00000396104 2734 ntAPPRIS P1 TSL 1 (best) BASIC10.07□□□□□ -0.8
LINC00242Q5T6M2 APOB-202ENST00000399256 3128 ntTSL 1 (best) BASIC10.07□□□□□ -0.8
LINC00242Q5T6M2 ZDHHC8-203ENST00000405930 3112 ntTSL 2 BASIC10.07□□□□□ -0.8
LINC00242Q5T6M2 APBB2-211ENST00000506352 3316 ntAPPRIS ALT1 TSL 5 BASIC10.07□□□□□ -0.8
LINC00242Q5T6M2 RNF145-202ENST00000424310 3613 ntAPPRIS P1 TSL 1 (best) BASIC10.07□□□□□ -0.8
LINC00242Q5T6M2 GTF2IRD1-202ENST00000424337 3077 ntAPPRIS ALT1 TSL 1 (best) BASIC10.07□□□□□ -0.8
LINC00242Q5T6M2 RPGRIP1-210ENST00000556336 2955 ntTSL 5 BASIC10.07□□□□□ -0.8
Retrieved 100 of 98,524 protein–RNA pairs in 36.7 ms