Protein–RNA interactions for Protein: Q4JDL3

PTPN20, Tyrosine-protein phosphatase non-receptor type 20, humanhuman

Predictions only

Length 420 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN20Q4JDL3 TMCO3-207ENST00000474393 2843 ntTSL 2 BASIC15.42■□□□□ 0.06
PTPN20Q4JDL3 CRLF2-201ENST00000381566 1545 ntAPPRIS P1 TSL 5 BASIC15.42■□□□□ 0.06
PTPN20Q4JDL3 SNAP47-203ENST00000366760 1446 ntAPPRIS ALT2 TSL 2 BASIC15.42■□□□□ 0.06
PTPN20Q4JDL3 PCCB-215ENST00000482086 1436 ntTSL 3 BASIC15.42■□□□□ 0.06
PTPN20Q4JDL3 RARG-203ENST00000425354 2959 ntAPPRIS P3 TSL 1 (best) BASIC15.42■□□□□ 0.06
PTPN20Q4JDL3 CNOT3-201ENST00000221232 2852 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
PTPN20Q4JDL3 LINC02396-202ENST00000550636 2324 ntTSL 2 BASIC15.42■□□□□ 0.06
PTPN20Q4JDL3 SRPX-205ENST00000538295 1780 ntAPPRIS ALT2 TSL 2 BASIC15.41■□□□□ 0.06
PTPN20Q4JDL3 OR2I1P-210ENST00000642037 4691 ntBASIC15.41■□□□□ 0.06
PTPN20Q4JDL3 ZMIZ2-202ENST00000309315 5144 ntAPPRIS P4 TSL 2 BASIC15.41■□□□□ 0.06
PTPN20Q4JDL3 TSC22D1-211ENST00000501704 4026 ntTSL 2 BASIC15.41■□□□□ 0.06
PTPN20Q4JDL3 HARS2-201ENST00000230771 2483 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
PTPN20Q4JDL3 C7orf72-201ENST00000297001 2028 ntAPPRIS P1 TSL 5 BASIC15.41■□□□□ 0.06
PTPN20Q4JDL3 RGPD6-202ENST00000330331 2848 ntTSL 2 BASIC15.41■□□□□ 0.06
PTPN20Q4JDL3 RGPD8-202ENST00000330575 2848 ntTSL 2 BASIC15.41■□□□□ 0.06
PTPN20Q4JDL3 CPEB3-201ENST00000265997 4851 ntAPPRIS P3 TSL 1 (best) BASIC15.41■□□□□ 0.06
PTPN20Q4JDL3 ACTA1-202ENST00000366684 1491 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
PTPN20Q4JDL3 SCML4-201ENST00000369020 1491 ntAPPRIS P1 TSL 5 BASIC15.41■□□□□ 0.06
PTPN20Q4JDL3 GPSM3-209ENST00000487761 1460 ntTSL 5 BASIC15.41■□□□□ 0.06
PTPN20Q4JDL3 PLA2G4B-202ENST00000458483 2734 ntAPPRIS P1 TSL 2 BASIC15.41■□□□□ 0.06
PTPN20Q4JDL3 AFF3-203ENST00000409579 4342 ntAPPRIS P3 TSL 5 BASIC15.41■□□□□ 0.06
PTPN20Q4JDL3 HS2ST1-201ENST00000370550 6736 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
PTPN20Q4JDL3 SPOCK3-201ENST00000357154 2986 ntAPPRIS ALT2 TSL 5 BASIC15.41■□□□□ 0.06
PTPN20Q4JDL3 AL139260.2-201ENST00000622355 2171 ntTSL 2 BASIC15.41■□□□□ 0.06
PTPN20Q4JDL3 TEX44-201ENST00000313965 1383 ntAPPRIS P1 BASIC15.41■□□□□ 0.06
PTPN20Q4JDL3 PHYHD1-202ENST00000353176 1374 ntTSL 5 BASIC15.41■□□□□ 0.06
PTPN20Q4JDL3 USP38-202ENST00000510377 4135 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
PTPN20Q4JDL3 FAS-202ENST00000352159 1722 ntTSL 5 BASIC15.41■□□□□ 0.06
PTPN20Q4JDL3 SRP14-201ENST00000267884 1077 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
PTPN20Q4JDL3 HIST1H1B-201ENST00000331442 681 ntAPPRIS P1 BASIC15.41■□□□□ 0.06
PTPN20Q4JDL3 EPDR1-203ENST00000425345 947 ntAPPRIS ALT2 TSL 1 (best) BASIC15.41■□□□□ 0.06
PTPN20Q4JDL3 AL592464.1-201ENST00000429389 429 ntTSL 2 BASIC15.41■□□□□ 0.06
PTPN20Q4JDL3 AL161932.2-201ENST00000435436 679 ntBASIC15.41■□□□□ 0.06
PTPN20Q4JDL3 ZNF589-204ENST00000440261 917 ntTSL 2 BASIC15.41■□□□□ 0.06
PTPN20Q4JDL3 RPSAP36-202ENST00000494591 1261 ntBASIC15.41■□□□□ 0.06
PTPN20Q4JDL3 AC106772.2-201ENST00000515085 442 ntTSL 3 BASIC15.41■□□□□ 0.06
PTPN20Q4JDL3 PUDP-206ENST00000540122 825 ntTSL 2 BASIC15.41■□□□□ 0.06
PTPN20Q4JDL3 XRCC3-210ENST00000554974 575 ntTSL 4 BASIC15.41■□□□□ 0.06
PTPN20Q4JDL3 AP002360.2-202ENST00000572035 738 ntTSL 3 BASIC15.41■□□□□ 0.06
PTPN20Q4JDL3 ZNF347-208ENST00000601804 496 ntTSL 4 BASIC15.41■□□□□ 0.06
PTPN20Q4JDL3 Z98259.2-201ENST00000641583 609 ntBASIC15.41■□□□□ 0.06
PTPN20Q4JDL3 CAMKK2-203ENST00000347034 5218 ntAPPRIS ALT2 TSL 1 (best) BASIC15.41■□□□□ 0.06
PTPN20Q4JDL3 NUDT16-203ENST00000537561 5943 ntTSL 5 BASIC15.41■□□□□ 0.06
PTPN20Q4JDL3 RPN2-202ENST00000373622 2348 ntTSL 2 BASIC15.41■□□□□ 0.06
PTPN20Q4JDL3 CUEDC1-206ENST00000577830 3621 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
PTPN20Q4JDL3 STK33-203ENST00000396672 2558 ntAPPRIS P1 TSL 2 BASIC15.41■□□□□ 0.06
PTPN20Q4JDL3 PAK3-208ENST00000446737 2550 ntAPPRIS P3 TSL 1 (best) BASIC15.41■□□□□ 0.06
PTPN20Q4JDL3 ZNF251-201ENST00000292562 2807 ntAPPRIS P1 TSL 2 BASIC15.41■□□□□ 0.06
PTPN20Q4JDL3 LINC01671-201ENST00000419628 1775 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
PTPN20Q4JDL3 TLE3-203ENST00000451782 2356 ntAPPRIS ALT1 TSL 5 BASIC15.41■□□□□ 0.06
PTPN20Q4JDL3 SIGLEC12-203ENST00000598614 1434 ntTSL 5 BASIC15.41■□□□□ 0.06
PTPN20Q4JDL3 LRRN1-201ENST00000319331 3823 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
PTPN20Q4JDL3 ANKRD26-201ENST00000376087 6591 ntAPPRIS P2 TSL 5 BASIC15.41■□□□□ 0.06
PTPN20Q4JDL3 ROBO1-209ENST00000495273 5600 ntAPPRIS P3 TSL 1 (best) BASIC15.41■□□□□ 0.06
PTPN20Q4JDL3 AL008718.2-201ENST00000609206 1313 ntBASIC15.41■□□□□ 0.06
PTPN20Q4JDL3 AC064801.2-201ENST00000625052 1303 ntBASIC15.41■□□□□ 0.06
PTPN20Q4JDL3 LIMK2-203ENST00000340552 2789 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
PTPN20Q4JDL3 MED12L-203ENST00000422248 2757 ntAPPRIS ALT2 TSL 2 BASIC15.41■□□□□ 0.06
PTPN20Q4JDL3 SPOCK3-226ENST00000541354 2797 ntTSL 2 BASIC15.41■□□□□ 0.06
PTPN20Q4JDL3 COG8-206ENST00000306875 4247 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
PTPN20Q4JDL3 AP4M1-201ENST00000359593 1817 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
PTPN20Q4JDL3 AP4M1-206ENST00000429084 1836 ntTSL 5 BASIC15.4■□□□□ 0.06
PTPN20Q4JDL3 SLC35C1-201ENST00000314134 4171 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
PTPN20Q4JDL3 ELOVL1-201ENST00000372458 1477 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
PTPN20Q4JDL3 CAB39-201ENST00000258418 3826 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
PTPN20Q4JDL3 ESPNL-201ENST00000343063 4836 ntAPPRIS P1 TSL 2 BASIC15.4■□□□□ 0.06
PTPN20Q4JDL3 PITPNM1-216ENST00000534749 4189 ntAPPRIS P3 TSL 1 (best) BASIC15.4■□□□□ 0.06
PTPN20Q4JDL3 HDAC2-206ENST00000519108 2000 ntTSL 2 BASIC15.4■□□□□ 0.06
PTPN20Q4JDL3 DDC-AS1-201ENST00000454521 1776 ntTSL 2 BASIC15.4■□□□□ 0.06
PTPN20Q4JDL3 BLVRB-201ENST00000263368 873 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
PTPN20Q4JDL3 EDN2-201ENST00000372587 1241 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
PTPN20Q4JDL3 IGHV3-7-201ENST00000390598 430 ntAPPRIS P1 BASIC15.4■□□□□ 0.06
PTPN20Q4JDL3 PSTK-202ENST00000405485 1047 ntAPPRIS P2 TSL 2 BASIC15.4■□□□□ 0.06
PTPN20Q4JDL3 GAS5-209ENST00000430245 723 ntTSL 3 BASIC15.4■□□□□ 0.06
PTPN20Q4JDL3 MTX1P1-201ENST00000440904 838 ntBASIC15.4■□□□□ 0.06
PTPN20Q4JDL3 AC092800.1-201ENST00000449492 579 ntTSL 2 BASIC15.4■□□□□ 0.06
PTPN20Q4JDL3 AC012507.1-201ENST00000454890 600 ntTSL 4 BASIC15.4■□□□□ 0.06
PTPN20Q4JDL3 RPL13AP20-201ENST00000459725 609 ntBASIC15.4■□□□□ 0.06
PTPN20Q4JDL3 MPZL1-209ENST00000474859 630 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
PTPN20Q4JDL3 CCDC153-204ENST00000503566 1295 ntAPPRIS P1 TSL 5 BASIC15.4■□□□□ 0.06
PTPN20Q4JDL3 HYAL3-206ENST00000513170 636 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
PTPN20Q4JDL3 FAM86HP-204ENST00000513466 959 ntBASIC15.4■□□□□ 0.06
PTPN20Q4JDL3 MUTYH-237ENST00000531105 501 ntTSL 5 BASIC15.4■□□□□ 0.06
PTPN20Q4JDL3 IL32-232ENST00000552356 623 ntAPPRIS ALT2 TSL 3 BASIC15.4■□□□□ 0.06
PTPN20Q4JDL3 AL583810.1-201ENST00000553344 1045 ntBASIC15.4■□□□□ 0.06
PTPN20Q4JDL3 RPL28-208ENST00000559463 852 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
PTPN20Q4JDL3 TXNDC17-202ENST00000570330 459 ntTSL 2 BASIC15.4■□□□□ 0.06
PTPN20Q4JDL3 NAA38-206ENST00000576384 424 ntTSL 2 BASIC15.4■□□□□ 0.06
PTPN20Q4JDL3 RN7SL560P-201ENST00000577943 264 ntBASIC15.4■□□□□ 0.06
PTPN20Q4JDL3 KCNC3-202ENST00000474951 3347 ntTSL 2 BASIC15.4■□□□□ 0.06
PTPN20Q4JDL3 DEGS2-201ENST00000305631 4352 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
PTPN20Q4JDL3 LRP5L-202ENST00000402859 1661 ntAPPRIS P2 TSL 5 BASIC15.4■□□□□ 0.06
PTPN20Q4JDL3 IRAK4-212ENST00000551736 1684 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
PTPN20Q4JDL3 DIDO1-201ENST00000266070 8574 ntAPPRIS ALT2 TSL 5 BASIC15.4■□□□□ 0.06
PTPN20Q4JDL3 TRIM23-202ENST00000274327 1829 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
PTPN20Q4JDL3 SPO11-203ENST00000371263 1834 ntAPPRIS P4 TSL 1 (best) BASIC15.4■□□□□ 0.06
PTPN20Q4JDL3 AP004608.1-203ENST00000528482 3679 ntTSL 5 BASIC15.4■□□□□ 0.06
PTPN20Q4JDL3 COG3-201ENST00000349995 4498 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
PTPN20Q4JDL3 KBTBD4-202ENST00000430070 2372 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
PTPN20Q4JDL3 SPRY1-208ENST00000622283 2352 ntAPPRIS P1 TSL 2 BASIC15.4■□□□□ 0.06
Retrieved 100 of 98,524 protein–RNA pairs in 40.3 ms