Protein–RNA interactions for Protein: Q3C1V8

BSX, Brain-specific homeobox protein homolog, humanhuman

Predictions only

Length 233 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BSXQ3C1V8 WNT5A-202ENST00000474267 6042 ntAPPRIS P1 TSL 5 BASIC11.95□□□□□ -0.5
BSXQ3C1V8 RNASEH1-201ENST00000315212 1887 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
BSXQ3C1V8 ARSH-201ENST00000381130 1875 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
BSXQ3C1V8 COG6-202ENST00000416691 5257 ntTSL 1 (best) BASIC11.95□□□□□ -0.5
BSXQ3C1V8 KRT17-201ENST00000311208 1524 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
BSXQ3C1V8 TYK2-210ENST00000529370 3176 ntTSL 2 BASIC11.95□□□□□ -0.5
BSXQ3C1V8 C1QTNF1-204ENST00000392445 2833 ntAPPRIS P1 TSL 2 BASIC11.95□□□□□ -0.5
BSXQ3C1V8 PCDHGA3-201ENST00000253812 4771 ntAPPRIS P3 TSL 1 (best) BASIC11.95□□□□□ -0.5
BSXQ3C1V8 TNS2-203ENST00000379902 4737 ntAPPRIS ALT2 TSL 1 (best) BASIC11.95□□□□□ -0.5
BSXQ3C1V8 OPN4-202ENST00000372071 2401 ntTSL 1 (best) BASIC11.95□□□□□ -0.5
BSXQ3C1V8 TGFB1I1-214ENST00000567607 1770 ntAPPRIS P3 TSL 1 (best) BASIC11.95□□□□□ -0.5
BSXQ3C1V8 RRAGB-202ENST00000374941 2061 ntTSL 1 (best) BASIC11.95□□□□□ -0.5
BSXQ3C1V8 KCNAB2-219ENST00000602612 2396 ntTSL 2 BASIC11.94□□□□□ -0.5
BSXQ3C1V8 HMBOX1-210ENST00000523613 1730 ntTSL 1 (best) BASIC11.94□□□□□ -0.5
BSXQ3C1V8 AP1M1-211ENST00000590756 1705 ntTSL 5 BASIC11.94□□□□□ -0.5
BSXQ3C1V8 MEAF6-203ENST00000373074 2005 ntTSL 2 BASIC11.94□□□□□ -0.5
BSXQ3C1V8 SF3A1-201ENST00000215793 5143 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
BSXQ3C1V8 KRT75-201ENST00000252245 2324 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
BSXQ3C1V8 SLC1A7-202ENST00000371494 2637 ntAPPRIS P3 TSL 1 (best) BASIC11.94□□□□□ -0.5
BSXQ3C1V8 TMPRSS4-214ENST00000523251 1689 ntAPPRIS ALT2 TSL 2 BASIC11.94□□□□□ -0.5
BSXQ3C1V8 RHOH-224ENST00000622175 2254 ntAPPRIS P1 TSL 4 BASIC11.94□□□□□ -0.5
BSXQ3C1V8 RPS6KA1-213ENST00000526792 2596 ntTSL 5 BASIC11.94□□□□□ -0.5
BSXQ3C1V8 GRIN1-204ENST00000371553 3751 ntAPPRIS P4 TSL 1 (best) BASIC11.94□□□□□ -0.5
BSXQ3C1V8 TKFC-201ENST00000394900 4696 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
BSXQ3C1V8 STIM1-201ENST00000300737 4038 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
BSXQ3C1V8 PDK2-203ENST00000503176 3440 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
BSXQ3C1V8 SCNN1A-201ENST00000228916 3135 ntAPPRIS P3 TSL 1 (best) BASIC11.94□□□□□ -0.5
BSXQ3C1V8 NALCN-AS1-201ENST00000457843 2846 ntTSL 2 BASIC11.94□□□□□ -0.5
BSXQ3C1V8 SH3KBP1-201ENST00000379697 1944 ntTSL 5 BASIC11.94□□□□□ -0.5
BSXQ3C1V8 ILDR1-205ENST00000462014 1612 ntAPPRIS ALT2 TSL 1 (best) BASIC11.94□□□□□ -0.5
BSXQ3C1V8 RPS28-203ENST00000600659 1326 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
BSXQ3C1V8 KLK8-211ENST00000600767 1324 ntAPPRIS P1 TSL 2 BASIC11.94□□□□□ -0.5
BSXQ3C1V8 ZFP36L2-201ENST00000282388 3696 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
BSXQ3C1V8 CDKL3-206ENST00000521118 2160 ntAPPRIS ALT2 TSL 5 BASIC11.94□□□□□ -0.5
BSXQ3C1V8 RGS12-202ENST00000338806 3010 ntTSL 1 (best) BASIC11.94□□□□□ -0.5
BSXQ3C1V8 GMCL1-201ENST00000282570 4191 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
BSXQ3C1V8 USP51-201ENST00000500968 4407 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
BSXQ3C1V8 MB-201ENST00000359787 1170 ntAPPRIS P1 TSL 2 BASIC11.94□□□□□ -0.5
BSXQ3C1V8 FAM19A3-202ENST00000369630 1282 ntTSL 1 (best) BASIC11.94□□□□□ -0.5
BSXQ3C1V8 NDUFA3-203ENST00000391763 338 ntTSL 2 BASIC11.94□□□□□ -0.5
BSXQ3C1V8 ISY1-203ENST00000393295 3842 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
BSXQ3C1V8 MB-202ENST00000397326 1197 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
BSXQ3C1V8 MB-203ENST00000397328 1153 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
BSXQ3C1V8 AC008278.1-201ENST00000431117 568 ntTSL 4 BASIC11.94□□□□□ -0.5
BSXQ3C1V8 AC241585.1-201ENST00000433527 519 ntBASIC11.94□□□□□ -0.5
BSXQ3C1V8 PNPO-202ENST00000434554 1196 ntTSL 2 BASIC11.94□□□□□ -0.5
BSXQ3C1V8 NAGK-205ENST00000443938 1221 ntAPPRIS ALT1 TSL 5 BASIC11.94□□□□□ -0.5
BSXQ3C1V8 METTL21A-209ENST00000448823 869 ntTSL 5 BASIC11.94□□□□□ -0.5
BSXQ3C1V8 SLC25A36-204ENST00000453248 1040 ntTSL 2 BASIC11.94□□□□□ -0.5
BSXQ3C1V8 AL589987.1-201ENST00000453380 819 ntBASIC11.94□□□□□ -0.5
BSXQ3C1V8 ALAS1-204ENST00000469224 2125 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
BSXQ3C1V8 FAM86LP-201ENST00000478302 853 ntBASIC11.94□□□□□ -0.5
BSXQ3C1V8 GLI4-203ENST00000517468 963 ntTSL 5 BASIC11.94□□□□□ -0.5
BSXQ3C1V8 LINC02356-202ENST00000552663 314 ntTSL 3 BASIC11.94□□□□□ -0.5
BSXQ3C1V8 ZNF843-202ENST00000564218 3816 ntAPPRIS ALT2 TSL 5 BASIC11.94□□□□□ -0.5
BSXQ3C1V8 IGHV3OR16-8-201ENST00000565407 349 ntAPPRIS P1 BASIC11.94□□□□□ -0.5
BSXQ3C1V8 AC130456.4-201ENST00000568635 665 ntTSL 2 BASIC11.94□□□□□ -0.5
BSXQ3C1V8 AC036164.1-201ENST00000570544 333 ntBASIC11.94□□□□□ -0.5
BSXQ3C1V8 AC040162.1-202ENST00000573493 573 ntAPPRIS P1 TSL 3 BASIC11.94□□□□□ -0.5
BSXQ3C1V8 AC093813.1-201ENST00000605066 256 ntBASIC11.94□□□□□ -0.5
BSXQ3C1V8 AL662799.1-202ENST00000614205 422 ntBASIC11.94□□□□□ -0.5
BSXQ3C1V8 TRIM29-221ENST00000627238 510 ntTSL 5 BASIC11.94□□□□□ -0.5
BSXQ3C1V8 SCP2-217ENST00000640998 1101 ntTSL 5 BASIC11.94□□□□□ -0.5
BSXQ3C1V8 OR2T27-203ENST00000641652 1285 ntAPPRIS P1 BASIC11.94□□□□□ -0.5
BSXQ3C1V8 ZKSCAN4-201ENST00000377294 2375 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
BSXQ3C1V8 DENND1C-202ENST00000543576 2395 ntAPPRIS ALT2 TSL 2 BASIC11.94□□□□□ -0.5
BSXQ3C1V8 SPOCK3-218ENST00000511531 2908 ntAPPRIS ALT2 TSL 5 BASIC11.94□□□□□ -0.5
BSXQ3C1V8 TMEM2-202ENST00000377044 6523 ntAPPRIS P3 TSL 1 (best) BASIC11.94□□□□□ -0.5
BSXQ3C1V8 ECHDC2-203ENST00000371522 1509 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
BSXQ3C1V8 SMYD3-214ENST00000490107 1548 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
BSXQ3C1V8 NAA15-201ENST00000296543 6222 ntAPPRIS P2 TSL 1 (best) BASIC11.94□□□□□ -0.5
BSXQ3C1V8 AC068987.4-201ENST00000562343 2094 ntTSL 5 BASIC11.94□□□□□ -0.5
BSXQ3C1V8 GNAS-213ENST00000371099 3709 ntTSL 5 BASIC11.94□□□□□ -0.5
BSXQ3C1V8 STRCP1-201ENST00000509801 5328 ntBASIC11.94□□□□□ -0.5
BSXQ3C1V8 APOB-202ENST00000399256 3128 ntTSL 1 (best) BASIC11.94□□□□□ -0.5
BSXQ3C1V8 CLCNKA-202ENST00000375692 2581 ntAPPRIS ALT1 TSL 1 (best) BASIC11.94□□□□□ -0.5
BSXQ3C1V8 MAOB-201ENST00000378069 2566 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
BSXQ3C1V8 RIPOR1-204ENST00000428437 4152 ntAPPRIS ALT2 TSL 2 BASIC11.94□□□□□ -0.5
BSXQ3C1V8 CACNA2D1-202ENST00000356860 7563 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
BSXQ3C1V8 SLC1A6-201ENST00000221742 1719 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
BSXQ3C1V8 TARS2-203ENST00000369054 1998 ntTSL 2 BASIC11.94□□□□□ -0.5
BSXQ3C1V8 CSGALNACT1-211ENST00000522854 1990 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
BSXQ3C1V8 USP44-203ENST00000537435 2499 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
BSXQ3C1V8 LDLRAD2-201ENST00000344642 4012 ntAPPRIS P1 TSL 2 BASIC11.94□□□□□ -0.5
BSXQ3C1V8 KRT8P14-201ENST00000414254 1442 ntBASIC11.94□□□□□ -0.5
BSXQ3C1V8 TMEM258-207ENST00000543510 1692 ntTSL 2 BASIC11.94□□□□□ -0.5
BSXQ3C1V8 SNUPN-206ENST00000564675 1682 ntAPPRIS P1 TSL 5 BASIC11.94□□□□□ -0.5
BSXQ3C1V8 LDHA-203ENST00000379412 1922 ntAPPRIS P1 TSL 2 BASIC11.94□□□□□ -0.5
BSXQ3C1V8 TCF3-201ENST00000262965 4451 ntAPPRIS P3 TSL 1 (best) BASIC11.94□□□□□ -0.5
BSXQ3C1V8 KSR1-204ENST00000398988 7237 ntAPPRIS P2 TSL 5 BASIC11.93□□□□□ -0.5
BSXQ3C1V8 CAMK2B-206ENST00000353625 1624 ntAPPRIS ALT1 TSL 1 (best) BASIC11.93□□□□□ -0.5
BSXQ3C1V8 PGLYRP4-202ENST00000368739 2116 ntAPPRIS ALT1 TSL 5 BASIC11.93□□□□□ -0.5
BSXQ3C1V8 KLHL34-201ENST00000379499 3641 ntAPPRIS P1 BASIC11.93□□□□□ -0.5
BSXQ3C1V8 KIRREL3-205ENST00000529097 3397 ntAPPRIS ALT2 TSL 1 (best) BASIC11.93□□□□□ -0.5
BSXQ3C1V8 ATP6AP2-213ENST00000636251 1877 ntAPPRIS ALT2 TSL 5 BASIC11.93□□□□□ -0.5
BSXQ3C1V8 SAMD4A-202ENST00000392067 6833 ntAPPRIS P1 TSL 2 BASIC11.93□□□□□ -0.5
BSXQ3C1V8 PPFIA4-204ENST00000447715 6349 ntAPPRIS ALT2 TSL 1 (best) BASIC11.93□□□□□ -0.5
BSXQ3C1V8 RIOK1-202ENST00000379834 2810 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
BSXQ3C1V8 PARP1-203ENST00000366794 3958 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
BSXQ3C1V8 HSPH1-202ENST00000380405 3480 ntTSL 1 (best) BASIC11.93□□□□□ -0.5
Retrieved 100 of 98,524 protein–RNA pairs in 37.2 ms