Protein–RNA interactions for Protein: Q04837

SSBP1, Single-stranded DNA-binding protein, mitochondrial, humanhuman

Known RBP Predictions only

Length 148 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP1Q04837 TMUB2-215ENST00000592825 2151 ntTSL 3 BASIC12.45□□□□□ -0.42
SSBP1Q04837 FEM1A-201ENST00000269856 9593 ntAPPRIS P1 BASIC12.45□□□□□ -0.42
SSBP1Q04837 SCARF1-201ENST00000263071 3443 ntAPPRIS P3 TSL 1 (best) BASIC12.44□□□□□ -0.42
SSBP1Q04837 KRT33B-201ENST00000251646 1607 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
SSBP1Q04837 EDEM3-201ENST00000318130 6898 ntAPPRIS P2 TSL 1 (best) BASIC12.44□□□□□ -0.42
SSBP1Q04837 SEC13-201ENST00000337354 1363 ntAPPRIS ALT1 TSL 1 (best) BASIC12.44□□□□□ -0.42
SSBP1Q04837 CBX3-201ENST00000337620 2128 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
SSBP1Q04837 RMND1-202ENST00000367303 1854 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
SSBP1Q04837 LY9-204ENST00000368039 1364 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
SSBP1Q04837 C20orf202-201ENST00000400633 1604 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
SSBP1Q04837 BCL2L2-PABPN1-203ENST00000557008 1366 ntAPPRIS P1 TSL 5 BASIC12.44□□□□□ -0.42
SSBP1Q04837 NFIC-206ENST00000589123 8068 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
SSBP1Q04837 APBB2-211ENST00000506352 3316 ntAPPRIS ALT1 TSL 5 BASIC12.44□□□□□ -0.42
SSBP1Q04837 ENG-204ENST00000480266 2804 ntAPPRIS ALT2 TSL 2 BASIC12.44□□□□□ -0.42
SSBP1Q04837 TBC1D26-206ENST00000579428 1583 ntTSL 2 BASIC12.44□□□□□ -0.42
SSBP1Q04837 SLC35D1-201ENST00000235345 6162 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
SSBP1Q04837 ZFYVE27-202ENST00000357540 2765 ntTSL 2 BASIC12.44□□□□□ -0.42
SSBP1Q04837 ZFYVE27-204ENST00000370610 2769 ntTSL 2 BASIC12.44□□□□□ -0.42
SSBP1Q04837 RHD-207ENST00000454452 1303 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
SSBP1Q04837 AL583722.1-201ENST00000540171 1307 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
SSBP1Q04837 SLC35G1-201ENST00000371408 3490 ntAPPRIS P3 TSL 2 BASIC12.44□□□□□ -0.42
SSBP1Q04837 MLXIPL-204ENST00000414749 3224 ntAPPRIS ALT2 TSL 1 (best) BASIC12.44□□□□□ -0.42
SSBP1Q04837 ZFP36L2-201ENST00000282388 3696 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
SSBP1Q04837 EP400NL-206ENST00000446190 3697 ntTSL 2 BASIC12.44□□□□□ -0.42
SSBP1Q04837 AC015712.6-201ENST00000431060 5068 ntTSL 2 BASIC12.44□□□□□ -0.42
SSBP1Q04837 VIPR1-202ENST00000433647 3161 ntTSL 2 BASIC12.44□□□□□ -0.42
SSBP1Q04837 DIRAS3-201ENST00000370981 1973 ntAPPRIS P1 TSL 2 BASIC12.44□□□□□ -0.42
SSBP1Q04837 GCLC-201ENST00000229416 3813 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
SSBP1Q04837 ELOF1-201ENST00000252445 1019 ntAPPRIS P1 TSL 2 BASIC12.44□□□□□ -0.42
SSBP1Q04837 CABP2-201ENST00000294288 925 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
SSBP1Q04837 FIBP-201ENST00000338369 1261 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
SSBP1Q04837 NME1-NME2-202ENST00000393193 1021 ntAPPRIS P2 TSL 2 BASIC12.44□□□□□ -0.42
SSBP1Q04837 TEN1-201ENST00000397640 994 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
SSBP1Q04837 ELOB-202ENST00000409477 997 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
SSBP1Q04837 COMT-209ENST00000449653 1035 ntAPPRIS ALT2 TSL 1 (best) BASIC12.44□□□□□ -0.42
SSBP1Q04837 FAM72B-205ENST00000471903 676 ntTSL 5 BASIC12.44□□□□□ -0.42
SSBP1Q04837 AC026434.2-201ENST00000506094 1078 ntBASIC12.44□□□□□ -0.42
SSBP1Q04837 AC034213.1-201ENST00000507681 806 ntTSL 3 BASIC12.44□□□□□ -0.42
SSBP1Q04837 PNOC-204ENST00000522209 1007 ntTSL 2 BASIC12.44□□□□□ -0.42
SSBP1Q04837 ELOF1-204ENST00000587806 1172 ntTSL 2 BASIC12.44□□□□□ -0.42
SSBP1Q04837 BIRC5-207ENST00000590449 568 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
SSBP1Q04837 SMCO4-206ENST00000596676 180 ntAPPRIS P1 BASIC12.44□□□□□ -0.42
SSBP1Q04837 GMFG-207ENST00000598034 1028 ntAPPRIS ALT1 TSL 1 (best) BASIC12.44□□□□□ -0.42
SSBP1Q04837 AC010503.2-201ENST00000599292 296 ntTSL 3 BASIC12.44□□□□□ -0.42
SSBP1Q04837 STXBP2-222ENST00000612033 1188 ntTSL 5 BASIC12.44□□□□□ -0.42
SSBP1Q04837 IRF5-214ENST00000613821 595 ntTSL 5 BASIC12.44□□□□□ -0.42
SSBP1Q04837 5S_rRNA.22-201ENST00000614916 106 ntBASIC12.44□□□□□ -0.42
SSBP1Q04837 LINC01726-201ENST00000624692 1253 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
SSBP1Q04837 AP1M2-201ENST00000250244 1749 ntAPPRIS P3 TSL 1 (best) BASIC12.44□□□□□ -0.42
SSBP1Q04837 NPNT-211ENST00000506666 2187 ntTSL 2 BASIC12.44□□□□□ -0.42
SSBP1Q04837 SLC4A7-214ENST00000455077 3775 ntAPPRIS ALT2 TSL 1 (best) BASIC12.44□□□□□ -0.42
SSBP1Q04837 COL6A1-201ENST00000361866 4238 ntAPPRIS P2 TSL 1 (best) BASIC12.44□□□□□ -0.42
SSBP1Q04837 IL1RL2-201ENST00000264257 2615 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
SSBP1Q04837 GULP1-207ENST00000409843 2643 ntAPPRIS ALT1 TSL 2 BASIC12.44□□□□□ -0.42
SSBP1Q04837 SOAT1-204ENST00000540564 6861 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
SSBP1Q04837 LGALS9-201ENST00000302228 3018 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
SSBP1Q04837 FFAR4-202ENST00000371483 3653 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
SSBP1Q04837 RTN4-202ENST00000337526 4790 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
SSBP1Q04837 OS9-206ENST00000435406 2346 ntTSL 2 BASIC12.44□□□□□ -0.42
SSBP1Q04837 LDB3-207ENST00000542786 1889 ntTSL 2 BASIC12.44□□□□□ -0.42
SSBP1Q04837 EPN2-210ENST00000571254 1883 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
SSBP1Q04837 RBFA-202ENST00000306735 1407 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
SSBP1Q04837 STX16-207ENST00000371141 4937 ntAPPRIS P3 TSL 2 BASIC12.44□□□□□ -0.42
SSBP1Q04837 MAP2K7-203ENST00000397983 3396 ntAPPRIS ALT1 TSL 1 (best) BASIC12.44□□□□□ -0.42
SSBP1Q04837 HHEX-202ENST00000472590 1605 ntTSL 2 BASIC12.44□□□□□ -0.42
SSBP1Q04837 CLEC12A-AS1-201ENST00000420905 3956 ntTSL 2 BASIC12.44□□□□□ -0.42
SSBP1Q04837 IRF9-202ENST00000396864 1838 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
SSBP1Q04837 AC010970.1-201ENST00000445125 1848 ntBASIC12.44□□□□□ -0.42
SSBP1Q04837 CXorf40A-212ENST00000514208 1840 ntAPPRIS ALT1 TSL 5 BASIC12.44□□□□□ -0.42
SSBP1Q04837 SGK3-208ENST00000521198 3306 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
SSBP1Q04837 MIRLET7BHG-201ENST00000360737 4560 ntTSL 2 BASIC12.44□□□□□ -0.42
SSBP1Q04837 REV3L-207ENST00000435970 10943 ntTSL 2 BASIC12.43□□□□□ -0.42
SSBP1Q04837 DUSP26-203ENST00000523956 1373 ntAPPRIS P1 TSL 5 BASIC12.43□□□□□ -0.42
SSBP1Q04837 C2-206ENST00000442278 2434 ntTSL 2 BASIC12.43□□□□□ -0.42
SSBP1Q04837 TNIP3-201ENST00000057513 2416 ntAPPRIS P3 TSL 1 (best) BASIC12.43□□□□□ -0.42
SSBP1Q04837 PTK7-203ENST00000345201 4071 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
SSBP1Q04837 OLFML3-203ENST00000393300 1961 ntTSL 3 BASIC12.43□□□□□ -0.42
SSBP1Q04837 DLGAP4-202ENST00000340491 2392 ntAPPRIS ALT2 TSL 1 (best) BASIC12.43□□□□□ -0.42
SSBP1Q04837 CENPL-202ENST00000356198 2357 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
SSBP1Q04837 STIM1-201ENST00000300737 4038 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
SSBP1Q04837 HAGLR-202ENST00000416928 4235 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
SSBP1Q04837 RPP30-202ENST00000371703 2589 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
SSBP1Q04837 PCDHGB7-202ENST00000612073 2785 ntAPPRIS ALT2 BASIC12.43□□□□□ -0.42
SSBP1Q04837 KCNT1-212ENST00000628528 7057 ntAPPRIS ALT2 TSL 2 BASIC12.43□□□□□ -0.42
SSBP1Q04837 PSIP1-203ENST00000380733 3391 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
SSBP1Q04837 SPG11-210ENST00000558319 6426 ntAPPRIS ALT2 TSL 5 BASIC12.43□□□□□ -0.42
SSBP1Q04837 RGR-201ENST00000358110 1349 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
SSBP1Q04837 FURIN-206ENST00000610579 4191 ntAPPRIS P1 TSL 5 BASIC12.43□□□□□ -0.42
SSBP1Q04837 UGGT2-204ENST00000397618 1547 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
SSBP1Q04837 TPM1-206ENST00000358278 1717 ntAPPRIS P3 TSL 1 (best) BASIC12.43□□□□□ -0.42
SSBP1Q04837 SLC35C2-203ENST00000372227 2505 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
SSBP1Q04837 WLS-201ENST00000262348 2748 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
SSBP1Q04837 PKD1P6-NPIPP1-202ENST00000605794 2902 ntTSL 2 BASIC12.43□□□□□ -0.42
SSBP1Q04837 TMPRSS12-202ENST00000551456 3336 ntTSL 2 BASIC12.43□□□□□ -0.42
SSBP1Q04837 MFSD2B-201ENST00000338315 2850 ntAPPRIS ALT2 TSL 5 BASIC12.43□□□□□ -0.42
SSBP1Q04837 SLC25A26-202ENST00000354883 2673 ntAPPRIS P1 TSL 2 BASIC12.43□□□□□ -0.42
SSBP1Q04837 LARP7-202ENST00000344442 2286 ntAPPRIS P1 TSL 2 BASIC12.43□□□□□ -0.42
SSBP1Q04837 AP000437.1-201ENST00000624057 2085 ntBASIC12.43□□□□□ -0.42
SSBP1Q04837 LINC00665-203ENST00000438368 1863 ntTSL 5 BASIC12.43□□□□□ -0.42
SSBP1Q04837 LIMS4-204ENST00000632897 1460 ntAPPRIS P1 TSL 5 BASIC12.43□□□□□ -0.42
Retrieved 100 of 98,524 protein–RNA pairs in 47.4 ms