Protein–RNA interactions for Protein: P63208

SKP1, S-phase kinase-associated protein 1, humanhuman

Predictions only

Length 163 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SKP1P63208 CFLAR-203ENST00000341222 1283 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
SKP1P63208 ARRB2-203ENST00000381488 1236 ntTSL 2 BASIC13.98□□□□□ -0.17
SKP1P63208 FOXB1-201ENST00000396057 2957 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
SKP1P63208 RPL14-202ENST00000396203 916 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
SKP1P63208 LIMS4-201ENST00000413601 1215 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
SKP1P63208 PTPA-213ENST00000419582 952 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
SKP1P63208 AL451065.1-201ENST00000428958 238 ntTSL 5 BASIC13.98□□□□□ -0.17
SKP1P63208 AP000350.4-201ENST00000433835 788 ntAPPRIS P1 TSL 5 BASIC13.98□□□□□ -0.17
SKP1P63208 GLYCTK-203ENST00000461183 889 ntTSL 3 BASIC13.98□□□□□ -0.17
SKP1P63208 FAM162A-202ENST00000469967 1015 ntTSL 2 BASIC13.98□□□□□ -0.17
SKP1P63208 KCNMA1-219ENST00000480683 2963 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
SKP1P63208 AC021723.1-201ENST00000486306 515 ntBASIC13.98□□□□□ -0.17
SKP1P63208 AC100850.1-201ENST00000506768 649 ntBASIC13.98□□□□□ -0.17
SKP1P63208 AC022447.6-201ENST00000515522 438 ntBASIC13.98□□□□□ -0.17
SKP1P63208 FAM8A2P-201ENST00000528813 1142 ntBASIC13.98□□□□□ -0.17
SKP1P63208 TPO-215ENST00000539820 1157 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
SKP1P63208 AL122035.1-201ENST00000556640 550 ntTSL 2 BASIC13.98□□□□□ -0.17
SKP1P63208 AC091271.1-201ENST00000611877 1162 ntBASIC13.98□□□□□ -0.17
SKP1P63208 MIR6074-201ENST00000612054 107 ntBASIC13.98□□□□□ -0.17
SKP1P63208 NPIPB11-202ENST00000614927 1216 ntTSL 5 BASIC13.98□□□□□ -0.17
SKP1P63208 LINC00623-205ENST00000621058 767 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
SKP1P63208 AC006453.2-202ENST00000635968 827 ntTSL 5 BASIC13.98□□□□□ -0.17
SKP1P63208 PRRC2B-210ENST00000638390 1084 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
SKP1P63208 CHN2-201ENST00000222792 3530 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
SKP1P63208 LRCH3-206ENST00000438796 7394 ntAPPRIS P5 TSL 2 BASIC13.98□□□□□ -0.17
SKP1P63208 LINC00917-207ENST00000601556 2618 ntTSL 2 BASIC13.98□□□□□ -0.17
SKP1P63208 ZNF395-201ENST00000344423 4808 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
SKP1P63208 ATG4B-205ENST00000404914 2878 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
SKP1P63208 PKD2L2-205ENST00000508638 2333 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
SKP1P63208 DNAJC7-202ENST00000426588 1774 ntTSL 2 BASIC13.98□□□□□ -0.17
SKP1P63208 FBXO45-202ENST00000440469 3689 ntTSL 2 BASIC13.98□□□□□ -0.17
SKP1P63208 AC092384.2-204ENST00000565053 2566 ntTSL 2 BASIC13.98□□□□□ -0.17
SKP1P63208 ARHGEF3-212ENST00000495373 2024 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
SKP1P63208 BRF1-211ENST00000547530 3358 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
SKP1P63208 HCG27-201ENST00000383331 1720 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
SKP1P63208 G3BP2-202ENST00000359707 4883 ntAPPRIS P4 TSL 1 (best) BASIC13.98□□□□□ -0.17
SKP1P63208 CBLN4-201ENST00000064571 3024 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
SKP1P63208 MARK3-202ENST00000303622 3283 ntAPPRIS P3 TSL 1 (best) BASIC13.98□□□□□ -0.17
SKP1P63208 MEGF8-201ENST00000251268 9549 ntAPPRIS ALT2 TSL 5 BASIC13.98□□□□□ -0.17
SKP1P63208 PLXNB2-207ENST00000449103 6383 ntAPPRIS P1 TSL 5 BASIC13.98□□□□□ -0.17
SKP1P63208 CYP51A1-201ENST00000003100 3210 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
SKP1P63208 NFYC-215ENST00000456393 1911 ntAPPRIS ALT1 TSL 1 (best) BASIC13.98□□□□□ -0.17
SKP1P63208 USP35-204ENST00000530267 2419 ntTSL 2 BASIC13.98□□□□□ -0.17
SKP1P63208 RAB18-208ENST00000611151 4931 ntTSL 5 BASIC13.97□□□□□ -0.17
SKP1P63208 BLMH-201ENST00000261714 2365 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
SKP1P63208 CRHR2-202ENST00000348438 1600 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
SKP1P63208 ZNF683-201ENST00000349618 1610 ntAPPRIS P3 TSL 1 (best) BASIC13.97□□□□□ -0.17
SKP1P63208 CBX3-202ENST00000396386 1857 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
SKP1P63208 SPEG-205ENST00000396698 3379 ntTSL 5 BASIC13.97□□□□□ -0.17
SKP1P63208 AC015688.4-201ENST00000580780 1647 ntBASIC13.97□□□□□ -0.17
SKP1P63208 PSMC3-212ENST00000602866 1373 ntAPPRIS ALT1 TSL 1 (best) BASIC13.97□□□□□ -0.17
SKP1P63208 ATP6AP2-213ENST00000636251 1877 ntAPPRIS ALT2 TSL 5 BASIC13.97□□□□□ -0.17
SKP1P63208 SPIN3-204ENST00000638257 4835 ntAPPRIS P1 TSL 5 BASIC13.97□□□□□ -0.17
SKP1P63208 FANCC-201ENST00000289081 4585 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
SKP1P63208 PRKCB-201ENST00000303531 7969 ntAPPRIS P4 TSL 1 (best) BASIC13.97□□□□□ -0.17
SKP1P63208 C14orf180-203ENST00000557649 2551 ntAPPRIS P3 TSL 1 (best) BASIC13.97□□□□□ -0.17
SKP1P63208 MTMR9-201ENST00000221086 7481 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
SKP1P63208 C1R-202ENST00000536053 2347 ntTSL 2 BASIC13.97□□□□□ -0.17
SKP1P63208 AL121757.1-201ENST00000430097 1836 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
SKP1P63208 AL590440.2-201ENST00000641973 1595 ntBASIC13.97□□□□□ -0.17
SKP1P63208 RGS3-201ENST00000317613 2542 ntTSL 2 BASIC13.97□□□□□ -0.17
SKP1P63208 GLT1D1-201ENST00000281703 2725 ntTSL 2 BASIC13.97□□□□□ -0.17
SKP1P63208 MAP4K1-210ENST00000591517 2700 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
SKP1P63208 SCLY-202ENST00000409736 1774 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
SKP1P63208 PTBP1-204ENST00000394601 3185 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
SKP1P63208 GABRB3-219ENST00000636466 4509 ntTSL 5 BASIC13.97□□□□□ -0.17
SKP1P63208 Metazoa_SRP.6-201ENST00000366384 298 ntBASIC13.97□□□□□ -0.17
SKP1P63208 MRPL43-206ENST00000370236 866 ntAPPRIS P1 TSL 2 BASIC13.97□□□□□ -0.17
SKP1P63208 MRPL43-207ENST00000370241 824 ntTSL 5 BASIC13.97□□□□□ -0.17
SKP1P63208 ATP6V1E1-202ENST00000399796 1208 ntTSL 2 BASIC13.97□□□□□ -0.17
SKP1P63208 AC092800.1-201ENST00000449492 579 ntTSL 2 BASIC13.97□□□□□ -0.17
SKP1P63208 AC104596.1-201ENST00000507826 579 ntTSL 4 BASIC13.97□□□□□ -0.17
SKP1P63208 AGER-214ENST00000538695 487 ntTSL 2 BASIC13.97□□□□□ -0.17
SKP1P63208 AL021546.1-201ENST00000551806 552 ntAPPRIS P1 TSL 3 BASIC13.97□□□□□ -0.17
SKP1P63208 MT1H-202ENST00000569155 697 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
SKP1P63208 AC139099.3-201ENST00000572850 472 ntTSL 5 BASIC13.97□□□□□ -0.17
SKP1P63208 AC129510.1-201ENST00000579979 555 ntTSL 3 BASIC13.97□□□□□ -0.17
SKP1P63208 RN7SL219P-201ENST00000582872 296 ntBASIC13.97□□□□□ -0.17
SKP1P63208 FBXL12-204ENST00000586469 544 ntTSL 2 BASIC13.97□□□□□ -0.17
SKP1P63208 AGER-215ENST00000620802 737 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
SKP1P63208 AL033527.4-201ENST00000641026 673 ntBASIC13.97□□□□□ -0.17
SKP1P63208 WNT16-201ENST00000222462 3147 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
SKP1P63208 KRT85-201ENST00000257901 2447 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
SKP1P63208 TSPOAP1-201ENST00000268893 7483 ntAPPRIS ALT2 TSL 1 (best) BASIC13.97□□□□□ -0.17
SKP1P63208 RCHY1-202ENST00000380840 1735 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
SKP1P63208 RIC8B-202ENST00000392837 5135 ntAPPRIS ALT2 TSL 5 BASIC13.97□□□□□ -0.17
SKP1P63208 AC009053.1-204ENST00000429810 2355 ntTSL 2 BASIC13.97□□□□□ -0.17
SKP1P63208 ABI3-201ENST00000225941 2109 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
SKP1P63208 PTGES3L-AARSD1-202ENST00000409103 1670 ntTSL 5 BASIC13.97□□□□□ -0.17
SKP1P63208 UGDH-201ENST00000316423 3216 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
SKP1P63208 P3H1-201ENST00000236040 2993 ntAPPRIS ALT2 TSL 2 BASIC13.97□□□□□ -0.17
SKP1P63208 ZNF586-201ENST00000391702 2265 ntTSL 2 BASIC13.97□□□□□ -0.17
SKP1P63208 FMNL1-206ENST00000587489 2487 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
SKP1P63208 BLCAP-205ENST00000397137 2036 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
SKP1P63208 GPR61-204ENST00000527748 4921 ntAPPRIS P1 TSL 2 BASIC13.96□□□□□ -0.17
SKP1P63208 ACVR1B-206ENST00000542485 2362 ntTSL 2 BASIC13.96□□□□□ -0.17
SKP1P63208 VPS36-207ENST00000611132 4607 ntTSL 1 (best) BASIC13.96□□□□□ -0.17
SKP1P63208 SFRP4-201ENST00000436072 2966 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
SKP1P63208 TXNDC5-204ENST00000473453 1301 ntTSL 1 (best) BASIC13.96□□□□□ -0.17
SKP1P63208 CRLF2-201ENST00000381566 1545 ntAPPRIS P1 TSL 5 BASIC13.96□□□□□ -0.17
Retrieved 100 of 98,524 protein–RNA pairs in 45.8 ms