Protein–RNA interactions for Protein: P62491

RAB11A, Ras-related protein Rab-11A, humanhuman

Predictions only

Length 216 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAB11AP62491 UQCRB-201ENST00000287022 5575 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
RAB11AP62491 BLCAP-205ENST00000397137 2036 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
RAB11AP62491 FBLIM1-203ENST00000375771 3498 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
RAB11AP62491 CCT4-201ENST00000394440 2520 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
RAB11AP62491 MKRN3-203ENST00000568252 1312 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
RAB11AP62491 AC104129.1-202ENST00000480694 4481 ntTSL 2 BASIC12.04□□□□□ -0.48
RAB11AP62491 GIPR-205ENST00000590918 3289 ntAPPRIS P2 TSL 1 (best) BASIC12.04□□□□□ -0.48
RAB11AP62491 PLEKHA7-202ENST00000355661 4980 ntAPPRIS P2 TSL 1 (best) BASIC12.04□□□□□ -0.48
RAB11AP62491 GMIP-201ENST00000203556 3538 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
RAB11AP62491 MLX-202ENST00000346833 2334 ntAPPRIS ALT1 TSL 1 (best) BASIC12.04□□□□□ -0.48
RAB11AP62491 IKZF1-203ENST00000346667 5376 ntTSL 5 BASIC12.04□□□□□ -0.48
RAB11AP62491 BUB3-201ENST00000368858 1361 ntAPPRIS ALT1 TSL 1 (best) BASIC12.04□□□□□ -0.48
RAB11AP62491 AC011298.1-201ENST00000407635 3398 ntTSL 2 BASIC12.04□□□□□ -0.48
RAB11AP62491 WDR26-201ENST00000414423 6872 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
RAB11AP62491 DDX41-208ENST00000507955 2607 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
RAB11AP62491 GOLGA8M-201ENST00000563027 1899 ntAPPRIS P1 TSL 5 BASIC12.04□□□□□ -0.48
RAB11AP62491 KSR1-216ENST00000582410 2392 ntTSL 2 BASIC12.04□□□□□ -0.48
RAB11AP62491 A1BG-AS1-204ENST00000595302 2130 ntTSL 2 BASIC12.04□□□□□ -0.48
RAB11AP62491 ATE1-208ENST00000540606 5165 ntTSL 2 BASIC12.04□□□□□ -0.48
RAB11AP62491 CRELD1-202ENST00000383811 2696 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
RAB11AP62491 PCTP-207ENST00000576183 2680 ntTSL 3 BASIC12.04□□□□□ -0.48
RAB11AP62491 COLGALT1-201ENST00000252599 3704 ntAPPRIS P2 TSL 1 (best) BASIC12.03□□□□□ -0.48
RAB11AP62491 AC134312.1-201ENST00000378417 3468 ntTSL 2 BASIC12.03□□□□□ -0.48
RAB11AP62491 SLC43A2-202ENST00000412517 1658 ntTSL 2 BASIC12.03□□□□□ -0.48
RAB11AP62491 CCHCR1-203ENST00000396268 2958 ntAPPRIS ALT2 TSL 1 (best) BASIC12.03□□□□□ -0.48
RAB11AP62491 NAA60-202ENST00000407558 2735 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
RAB11AP62491 USH1C-201ENST00000005226 2700 ntAPPRIS P3 TSL 5 BASIC12.03□□□□□ -0.48
RAB11AP62491 ASB3-201ENST00000263634 2214 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
RAB11AP62491 UQCC1-204ENST00000374384 2201 ntTSL 2 BASIC12.03□□□□□ -0.48
RAB11AP62491 NUMA1-233ENST00000616538 6998 ntAPPRIS ALT2 TSL 5 BASIC12.03□□□□□ -0.48
RAB11AP62491 PDLIM5-202ENST00000318007 1960 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
RAB11AP62491 DMAP1-203ENST00000372289 1730 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
RAB11AP62491 NIN-206ENST00000453196 6785 ntAPPRIS ALT2 TSL 5 BASIC12.03□□□□□ -0.48
RAB11AP62491 POTEE-201ENST00000356920 4159 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
RAB11AP62491 LMNA-213ENST00000473598 2015 ntTSL 2 BASIC12.03□□□□□ -0.48
RAB11AP62491 DAZL-201ENST00000250863 3104 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
RAB11AP62491 SFMBT2-204ENST00000397167 8024 ntAPPRIS P1 TSL 5 BASIC12.03□□□□□ -0.48
RAB11AP62491 ZMYND10-202ENST00000360165 1757 ntAPPRIS ALT1 TSL 1 (best) BASIC12.03□□□□□ -0.48
RAB11AP62491 KIAA0513-201ENST00000258180 7404 ntAPPRIS P1 TSL 5 BASIC12.03□□□□□ -0.48
RAB11AP62491 NTRK3-AS1-201ENST00000569588 2663 ntTSL 2 BASIC12.03□□□□□ -0.48
RAB11AP62491 THSD7A-205ENST00000617773 10583 ntAPPRIS ALT2 TSL 5 BASIC12.03□□□□□ -0.48
RAB11AP62491 ZNF593-201ENST00000270812 698 ntTSL 2 BASIC12.03□□□□□ -0.48
RAB11AP62491 MRPS18A-202ENST00000372133 1062 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
RAB11AP62491 HSD17B10-203ENST00000375304 916 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
RAB11AP62491 PRUNE2-202ENST00000376713 1069 ntTSL 5 BASIC12.03□□□□□ -0.48
RAB11AP62491 AP1S3-204ENST00000409375 552 ntTSL 3 BASIC12.03□□□□□ -0.48
RAB11AP62491 AFG3L1P-209ENST00000429663 458 ntTSL 3 BASIC12.03□□□□□ -0.48
RAB11AP62491 DARS-AS1-203ENST00000438432 768 ntTSL 3 BASIC12.03□□□□□ -0.48
RAB11AP62491 AC026191.1-201ENST00000491930 829 ntTSL 3 BASIC12.03□□□□□ -0.48
RAB11AP62491 PGAM5P1-201ENST00000518923 814 ntBASIC12.03□□□□□ -0.48
RAB11AP62491 HDAC2-AS2-213ENST00000520891 603 ntTSL 4 BASIC12.03□□□□□ -0.48
RAB11AP62491 SPCS2-202ENST00000526361 772 ntTSL 2 BASIC12.03□□□□□ -0.48
RAB11AP62491 AP000721.1-201ENST00000535431 559 ntAPPRIS P1 TSL 5 BASIC12.03□□□□□ -0.48
RAB11AP62491 IGHV3OR16-13-201ENST00000562905 353 ntAPPRIS P1 BASIC12.03□□□□□ -0.48
RAB11AP62491 AC005759.1-201ENST00000594805 855 ntTSL 3 BASIC12.03□□□□□ -0.48
RAB11AP62491 SLC46A1-207ENST00000612814 6376 ntAPPRIS P1 TSL 2 BASIC12.03□□□□□ -0.48
RAB11AP62491 ARHGEF9-230ENST00000637178 2145 ntTSL 5 BASIC12.03□□□□□ -0.48
RAB11AP62491 FP565260.2-201ENST00000623476 1599 ntAPPRIS P1 TSL 3 BASIC12.03□□□□□ -0.48
RAB11AP62491 DCAF10-202ENST00000377724 3862 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
RAB11AP62491 APBB2-211ENST00000506352 3316 ntAPPRIS ALT1 TSL 5 BASIC12.03□□□□□ -0.48
RAB11AP62491 TBL3-208ENST00000615855 2472 ntTSL 5 BASIC12.03□□□□□ -0.48
RAB11AP62491 DHX37-201ENST00000308736 4550 ntAPPRIS P2 TSL 1 (best) BASIC12.03□□□□□ -0.48
RAB11AP62491 TRIM13-201ENST00000356017 1637 ntAPPRIS ALT1 TSL 1 (best) BASIC12.03□□□□□ -0.48
RAB11AP62491 ATL3-203ENST00000538786 1920 ntAPPRIS ALT2 TSL 2 BASIC12.03□□□□□ -0.48
RAB11AP62491 AL356258.1-201ENST00000605929 2246 ntTSL 2 BASIC12.03□□□□□ -0.48
RAB11AP62491 SPACA9-203ENST00000372136 2536 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
RAB11AP62491 CACNA1C-214ENST00000399634 7590 ntAPPRIS ALT2 TSL 5 BASIC12.03□□□□□ -0.48
RAB11AP62491 CACNA1C-222ENST00000406454 7590 ntAPPRIS ALT2 TSL 5 BASIC12.03□□□□□ -0.48
RAB11AP62491 COL18A1-AS1-201ENST00000397787 3425 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
RAB11AP62491 LRP8-203ENST00000354412 2553 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
RAB11AP62491 STYXL1-203ENST00000359697 1374 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
RAB11AP62491 TBKBP1-201ENST00000361722 4121 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
RAB11AP62491 WDR45-206ENST00000376368 1381 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
RAB11AP62491 ZNF890P-201ENST00000422060 1352 ntTSL 2 BASIC12.03□□□□□ -0.48
RAB11AP62491 RERG-209ENST00000546331 1383 ntTSL 2 BASIC12.03□□□□□ -0.48
RAB11AP62491 SCARB2-215ENST00000639145 4471 ntAPPRIS ALT1 TSL 5 BASIC12.03□□□□□ -0.48
RAB11AP62491 FIBCD1-202ENST00000372338 3253 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
RAB11AP62491 RFTN1-203ENST00000432519 2695 ntAPPRIS ALT2 TSL 1 (best) BASIC12.03□□□□□ -0.48
RAB11AP62491 TMPO-202ENST00000266732 3615 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
RAB11AP62491 KCNK9-203ENST00000520439 1441 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
RAB11AP62491 DENND1C-202ENST00000543576 2395 ntAPPRIS ALT2 TSL 2 BASIC12.03□□□□□ -0.48
RAB11AP62491 AC051649.2-201ENST00000640310 3319 ntAPPRIS P1 BASIC12.03□□□□□ -0.48
RAB11AP62491 VPS9D1-202ENST00000561976 2791 ntAPPRIS ALT2 TSL 1 (best) BASIC12.02□□□□□ -0.48
RAB11AP62491 ALAS1-204ENST00000469224 2125 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.48
RAB11AP62491 CAMK2A-203ENST00000398376 1493 ntTSL 1 (best) BASIC12.02□□□□□ -0.48
RAB11AP62491 CAMKV-217ENST00000620470 1485 ntTSL 1 (best) BASIC12.02□□□□□ -0.48
RAB11AP62491 THSD4-201ENST00000261862 3133 ntTSL 5 BASIC12.02□□□□□ -0.48
RAB11AP62491 VWA8-201ENST00000281496 3475 ntTSL 1 (best) BASIC12.02□□□□□ -0.48
RAB11AP62491 SMC6-201ENST00000351948 5173 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.48
RAB11AP62491 SLC35C2-203ENST00000372227 2505 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.48
RAB11AP62491 TMEM248-201ENST00000341567 4229 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.48
RAB11AP62491 IFNA6-202ENST00000380210 1544 ntAPPRIS P1 BASIC12.02□□□□□ -0.48
RAB11AP62491 AC015818.8-201ENST00000587907 1519 ntBASIC12.02□□□□□ -0.48
RAB11AP62491 MPP2-219ENST00000612133 4938 ntTSL 5 BASIC12.02□□□□□ -0.48
RAB11AP62491 P2RX5-207ENST00000551178 1863 ntTSL 1 (best) BASIC12.02□□□□□ -0.48
RAB11AP62491 ATP6AP2-213ENST00000636251 1877 ntAPPRIS ALT2 TSL 5 BASIC12.02□□□□□ -0.48
RAB11AP62491 IL1RAPL2-202ENST00000372582 2985 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
RAB11AP62491 LIG1-202ENST00000427526 3027 ntAPPRIS ALT2 TSL 2 BASIC12.02□□□□□ -0.49
RAB11AP62491 AL157414.3-201ENST00000624276 1954 ntBASIC12.02□□□□□ -0.49
RAB11AP62491 HNRNPLL-209ENST00000449105 4173 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Retrieved 100 of 98,524 protein–RNA pairs in 32.1 ms