Protein–RNA interactions for Protein: P61247

RPS3A, 40S ribosomal protein S3a, humanhuman

Known RBP Predictions only

Length 264 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPS3AP61247 TMUB2-201ENST00000319511 2418 ntAPPRIS P3 TSL 1 (best) BASIC13.9□□□□□ -0.18
RPS3AP61247 ZMYND15-204ENST00000573751 2409 ntTSL 2 BASIC13.9□□□□□ -0.18
RPS3AP61247 NSUN5P1-206ENST00000457988 1836 ntTSL 2 BASIC13.9□□□□□ -0.18
RPS3AP61247 RBPMS2-202ENST00000560606 1746 ntTSL 2 BASIC13.9□□□□□ -0.18
RPS3AP61247 KDM6B-201ENST00000254846 6713 ntAPPRIS P2 TSL 1 (best) BASIC13.9□□□□□ -0.19
RPS3AP61247 GLB1L3-201ENST00000389887 3566 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
RPS3AP61247 ASPH-214ENST00000519234 2874 ntTSL 5 BASIC13.89□□□□□ -0.19
RPS3AP61247 ST6GAL1-201ENST00000169298 4645 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
RPS3AP61247 WASHC2A-203ENST00000351071 4642 ntAPPRIS ALT2 TSL 1 (best) BASIC13.89□□□□□ -0.19
RPS3AP61247 C19orf57-201ENST00000346736 2489 ntAPPRIS P2 TSL 2 BASIC13.89□□□□□ -0.19
RPS3AP61247 ACSL1-201ENST00000281455 3832 ntAPPRIS P3 TSL 1 (best) BASIC13.89□□□□□ -0.19
RPS3AP61247 TNFAIP8L3-201ENST00000327536 2262 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
RPS3AP61247 CCDC43-203ENST00000588210 2067 ntAPPRIS ALT1 TSL 1 (best) BASIC13.89□□□□□ -0.19
RPS3AP61247 ADCYAP1-203ENST00000579794 3346 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
RPS3AP61247 ZBED6CL-201ENST00000343855 2933 ntAPPRIS P1 BASIC13.89□□□□□ -0.19
RPS3AP61247 SLC4A7-207ENST00000437179 3667 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
RPS3AP61247 KLK6-203ENST00000391808 1478 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
RPS3AP61247 DNAJC22-202ENST00000549441 4412 ntAPPRIS P1 TSL 2 BASIC13.89□□□□□ -0.19
RPS3AP61247 ZNF501-205ENST00000620116 3382 ntAPPRIS P1 TSL 4 BASIC13.89□□□□□ -0.19
RPS3AP61247 WSB2-202ENST00000441406 1353 ntTSL 2 BASIC13.89□□□□□ -0.19
RPS3AP61247 TBC1D1-214ENST00000508802 4119 ntTSL 2 BASIC13.89□□□□□ -0.19
RPS3AP61247 BEND7-201ENST00000341083 2239 ntAPPRIS P3 TSL 2 BASIC13.89□□□□□ -0.19
RPS3AP61247 RETN-201ENST00000221515 520 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
RPS3AP61247 BUD31-201ENST00000222969 1035 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
RPS3AP61247 PDGFB-202ENST00000381551 1125 ntTSL 5 BASIC13.89□□□□□ -0.19
RPS3AP61247 KRTAP10-2-201ENST00000391621 1149 ntAPPRIS P1 BASIC13.89□□□□□ -0.19
RPS3AP61247 NDUFA3-203ENST00000391763 338 ntTSL 2 BASIC13.89□□□□□ -0.19
RPS3AP61247 BLCAP-202ENST00000397131 633 ntAPPRIS P1 TSL 3 BASIC13.89□□□□□ -0.19
RPS3AP61247 BLCAP-203ENST00000397134 566 ntAPPRIS P1 TSL 4 BASIC13.89□□□□□ -0.19
RPS3AP61247 KRTAP10-1-201ENST00000400375 1215 ntAPPRIS P1 BASIC13.89□□□□□ -0.19
RPS3AP61247 PTP4A1P2-201ENST00000546033 454 ntBASIC13.89□□□□□ -0.19
RPS3AP61247 AC132938.2-201ENST00000579188 680 ntBASIC13.89□□□□□ -0.19
RPS3AP61247 METTL26-214ENST00000614890 801 ntTSL 3 BASIC13.89□□□□□ -0.19
RPS3AP61247 AC015819.2-201ENST00000618730 555 ntTSL 3 BASIC13.89□□□□□ -0.19
RPS3AP61247 ABBA01031660.1-201ENST00000635219 756 ntBASIC13.89□□□□□ -0.19
RPS3AP61247 AL591163.1-201ENST00000641757 987 ntBASIC13.89□□□□□ -0.19
RPS3AP61247 ZNF143-213ENST00000530463 2022 ntAPPRIS ALT1 TSL 1 (best) BASIC13.89□□□□□ -0.19
RPS3AP61247 CDCA3-207ENST00000538862 1943 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
RPS3AP61247 HMGA1-203ENST00000374116 1848 ntAPPRIS ALT1 TSL 1 (best) BASIC13.89□□□□□ -0.19
RPS3AP61247 CAP1-203ENST00000372797 3105 ntAPPRIS P3 TSL 1 (best) BASIC13.89□□□□□ -0.19
RPS3AP61247 DDX19B-203ENST00000393657 1717 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
RPS3AP61247 TNK1-207ENST00000576812 3023 ntAPPRIS ALT1 TSL 1 (best) BASIC13.89□□□□□ -0.19
RPS3AP61247 KCNH6-204ENST00000581784 3017 ntTSL 2 BASIC13.89□□□□□ -0.19
RPS3AP61247 AP5Z1-201ENST00000348624 2901 ntAPPRIS P1 TSL 5 BASIC13.89□□□□□ -0.19
RPS3AP61247 ZNF683-201ENST00000349618 1610 ntAPPRIS P3 TSL 1 (best) BASIC13.89□□□□□ -0.19
RPS3AP61247 AFDN-205ENST00000392108 6812 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
RPS3AP61247 SC5D-202ENST00000392789 2258 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
RPS3AP61247 PCCB-218ENST00000490504 1613 ntTSL 3 BASIC13.89□□□□□ -0.19
RPS3AP61247 COL1A2-201ENST00000297268 5411 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
RPS3AP61247 GGACT-201ENST00000376250 2804 ntAPPRIS P1 TSL 3 BASIC13.89□□□□□ -0.19
RPS3AP61247 TMCC3-201ENST00000261226 5877 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
RPS3AP61247 ECHDC2-203ENST00000371522 1509 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
RPS3AP61247 AL589669.1-201ENST00000639829 1506 ntTSL 5 BASIC13.89□□□□□ -0.19
RPS3AP61247 AC068987.4-201ENST00000562343 2094 ntTSL 5 BASIC13.89□□□□□ -0.19
RPS3AP61247 ARHGAP45-201ENST00000313093 4273 ntAPPRIS P3 TSL 1 (best) BASIC13.89□□□□□ -0.19
RPS3AP61247 SPIN3-204ENST00000638257 4835 ntAPPRIS P1 TSL 5 BASIC13.89□□□□□ -0.19
RPS3AP61247 AC011455.3-201ENST00000599996 1967 ntAPPRIS P1 TSL 2 BASIC13.89□□□□□ -0.19
RPS3AP61247 ATP2C2-AS1-201ENST00000565700 2998 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
RPS3AP61247 BIRC5-203ENST00000374948 2446 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
RPS3AP61247 DAGLB-201ENST00000297056 2897 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
RPS3AP61247 HNRNPR-204ENST00000427764 1788 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
RPS3AP61247 NEFH-201ENST00000310624 3783 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
RPS3AP61247 EXO5-201ENST00000296380 2217 ntAPPRIS P1 TSL 2 BASIC13.88□□□□□ -0.19
RPS3AP61247 GRIN1-206ENST00000371559 3577 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
RPS3AP61247 DGAT2L6-201ENST00000333026 1553 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
RPS3AP61247 MAP2K7-203ENST00000397983 3396 ntAPPRIS ALT1 TSL 1 (best) BASIC13.88□□□□□ -0.19
RPS3AP61247 MKLN1-203ENST00000421797 2460 ntTSL 2 BASIC13.88□□□□□ -0.19
RPS3AP61247 NUP54-217ENST00000514987 1563 ntTSL 2 BASIC13.88□□□□□ -0.19
RPS3AP61247 PATL2-207ENST00000560775 1913 ntAPPRIS P3 TSL 5 BASIC13.88□□□□□ -0.19
RPS3AP61247 PLIN4-202ENST00000633942 6484 ntAPPRIS ALT2 TSL 5 BASIC13.88□□□□□ -0.19
RPS3AP61247 LRRC20-204ENST00000373224 3095 ntAPPRIS P1 TSL 2 BASIC13.88□□□□□ -0.19
RPS3AP61247 RAB6C-201ENST00000410061 3075 ntAPPRIS P1 BASIC13.88□□□□□ -0.19
RPS3AP61247 SFRP1-202ENST00000379845 3873 ntTSL 2 BASIC13.88□□□□□ -0.19
RPS3AP61247 WFIKKN2-202ENST00000426127 2193 ntTSL 2 BASIC13.88□□□□□ -0.19
RPS3AP61247 PPP6R2-203ENST00000395741 3304 ntAPPRIS ALT2 TSL 1 (best) BASIC13.88□□□□□ -0.19
RPS3AP61247 SF1-205ENST00000377394 2854 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
RPS3AP61247 AC109583.3-201ENST00000641183 3128 ntAPPRIS P1 BASIC13.88□□□□□ -0.19
RPS3AP61247 NCR1-201ENST00000291890 1155 ntAPPRIS P3 TSL 5 BASIC13.88□□□□□ -0.19
RPS3AP61247 THOC7-201ENST00000295899 990 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
RPS3AP61247 NCR1-202ENST00000338835 973 ntAPPRIS ALT2 TSL 1 (best) BASIC13.88□□□□□ -0.19
RPS3AP61247 NCR1-203ENST00000350790 739 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
RPS3AP61247 C1orf68-201ENST00000368775 949 ntAPPRIS P1 BASIC13.88□□□□□ -0.19
RPS3AP61247 TEX30-203ENST00000376022 828 ntTSL 2 BASIC13.88□□□□□ -0.19
RPS3AP61247 IFI27L1-201ENST00000393115 674 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
RPS3AP61247 AC078785.1-203ENST00000467342 573 ntTSL 4 BASIC13.88□□□□□ -0.19
RPS3AP61247 KRBOX4-207ENST00000487081 1247 ntAPPRIS ALT2 TSL 1 (best) BASIC13.88□□□□□ -0.19
RPS3AP61247 AC113383.1-201ENST00000514696 582 ntTSL 4 BASIC13.88□□□□□ -0.19
RPS3AP61247 TDH-203ENST00000531764 1110 ntBASIC13.88□□□□□ -0.19
RPS3AP61247 PLEKHA7-214ENST00000532079 565 ntTSL 5 BASIC13.88□□□□□ -0.19
RPS3AP61247 AP001063.1-201ENST00000568332 529 ntBASIC13.88□□□□□ -0.19
RPS3AP61247 FXYD6-216ENST00000584230 566 ntAPPRIS ALT1 TSL 3 BASIC13.88□□□□□ -0.19
RPS3AP61247 C17orf62-239ENST00000585080 741 ntAPPRIS P1 TSL 5 BASIC13.88□□□□□ -0.19
RPS3AP61247 ZNF180-204ENST00000586637 1023 ntTSL 5 BASIC13.88□□□□□ -0.19
RPS3AP61247 RAB11B-202ENST00000594216 894 ntTSL 2 BASIC13.88□□□□□ -0.19
RPS3AP61247 AC010735.2-201ENST00000607970 584 ntTSL 4 BASIC13.88□□□□□ -0.19
RPS3AP61247 TMEM179-205ENST00000615704 636 ntTSL 2 BASIC13.88□□□□□ -0.19
RPS3AP61247 HIST1H2AB-201ENST00000615868 393 ntAPPRIS P1 BASIC13.88□□□□□ -0.19
RPS3AP61247 AC006449.3-201ENST00000620144 563 ntTSL 4 BASIC13.88□□□□□ -0.19
RPS3AP61247 IGHV3-72-202ENST00000621503 303 ntBASIC13.88□□□□□ -0.19
RPS3AP61247 AMT-224ENST00000635808 1610 ntTSL 5 BASIC13.88□□□□□ -0.19
Retrieved 100 of 98,524 protein–RNA pairs in 189 ms