Protein–RNA interactions for Protein: P55289

CDH12, Cadherin-12, humanhuman

Predictions only

Length 794 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH12P55289 RNU1-114P-201ENST00000365297 166 ntBASIC13.76□□□□□ -0.21
CDH12P55289 MORN4-202ENST00000370635 419 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
CDH12P55289 AC098850.1-201ENST00000419919 790 ntBASIC13.76□□□□□ -0.21
CDH12P55289 DFFBP1-201ENST00000433250 979 ntBASIC13.76□□□□□ -0.21
CDH12P55289 PLXNB2-207ENST00000449103 6383 ntAPPRIS P1 TSL 5 BASIC13.76□□□□□ -0.21
CDH12P55289 CXorf40A-211ENST00000450602 1204 ntAPPRIS P3 TSL 3 BASIC13.76□□□□□ -0.21
CDH12P55289 AC078785.1-203ENST00000467342 573 ntTSL 4 BASIC13.76□□□□□ -0.21
CDH12P55289 SERBP1P5-201ENST00000510079 1181 ntBASIC13.76□□□□□ -0.21
CDH12P55289 FAM153B-214ENST00000512862 1071 ntAPPRIS ALT2 TSL 2 BASIC13.76□□□□□ -0.21
CDH12P55289 PXN-AS1-201ENST00000535200 1170 ntTSL 2 BASIC13.76□□□□□ -0.21
CDH12P55289 AC067852.1-201ENST00000585572 594 ntTSL 4 BASIC13.76□□□□□ -0.21
CDH12P55289 AC008761.3-201ENST00000624803 892 ntBASIC13.76□□□□□ -0.21
CDH12P55289 RAPGEF3-205ENST00000449771 6061 ntAPPRIS ALT2 TSL 2 BASIC13.76□□□□□ -0.21
CDH12P55289 AC105206.1-202ENST00000314927 2368 ntBASIC13.76□□□□□ -0.21
CDH12P55289 THSD4-202ENST00000355327 9200 ntAPPRIS P1 TSL 5 BASIC13.76□□□□□ -0.21
CDH12P55289 PRKCSH-212ENST00000591462 2209 ntAPPRIS ALT2 TSL 5 BASIC13.76□□□□□ -0.21
CDH12P55289 LINC00841-201ENST00000451929 2126 ntTSL 2 BASIC13.76□□□□□ -0.21
CDH12P55289 MPP2-214ENST00000523501 2121 ntAPPRIS P1 TSL 2 BASIC13.76□□□□□ -0.21
CDH12P55289 STX1A-201ENST00000222812 2095 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
CDH12P55289 STX1A-204ENST00000395156 2050 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
CDH12P55289 PLCD1-204ENST00000463876 2963 ntAPPRIS ALT1 TSL 2 BASIC13.76□□□□□ -0.21
CDH12P55289 STAM2-201ENST00000263904 5701 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
CDH12P55289 MYLIP-201ENST00000349606 2796 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
CDH12P55289 SPECC1L-ADORA2A-201ENST00000358654 6204 ntAPPRIS P1 TSL 2 BASIC13.76□□□□□ -0.21
CDH12P55289 SUMO3-203ENST00000397898 1779 ntTSL 3 BASIC13.76□□□□□ -0.21
CDH12P55289 TOMM40L-201ENST00000367987 2636 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
CDH12P55289 AC022028.2-201ENST00000474115 2619 ntTSL 2 BASIC13.76□□□□□ -0.21
CDH12P55289 NR1H3-221ENST00000481889 1704 ntTSL 5 BASIC13.76□□□□□ -0.21
CDH12P55289 ABLIM2-209ENST00000505872 1680 ntAPPRIS ALT2 TSL 5 BASIC13.75□□□□□ -0.21
CDH12P55289 WARS-203ENST00000358655 2466 ntTSL 2 BASIC13.75□□□□□ -0.21
CDH12P55289 USP44-203ENST00000537435 2499 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
CDH12P55289 PPM1M-201ENST00000296487 2429 ntTSL 2 BASIC13.75□□□□□ -0.21
CDH12P55289 ARHGAP4-201ENST00000350060 3235 ntAPPRIS P3 TSL 1 (best) BASIC13.75□□□□□ -0.21
CDH12P55289 ARHGEF1-201ENST00000337665 3171 ntAPPRIS P4 TSL 1 (best) BASIC13.75□□□□□ -0.21
CDH12P55289 PARP3-203ENST00000431474 2360 ntAPPRIS P3 TSL 1 (best) BASIC13.75□□□□□ -0.21
CDH12P55289 P2RY4-201ENST00000374519 1595 ntAPPRIS P1 BASIC13.75□□□□□ -0.21
CDH12P55289 POM121-201ENST00000358357 5320 ntAPPRIS P3 TSL 1 (best) BASIC13.75□□□□□ -0.21
CDH12P55289 MLF1-217ENST00000619577 2290 ntTSL 5 BASIC13.75□□□□□ -0.21
CDH12P55289 TBC1D22A-201ENST00000337137 3787 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
CDH12P55289 IFITM10-201ENST00000340134 3706 ntAPPRIS P1 TSL 3 BASIC13.75□□□□□ -0.21
CDH12P55289 KLHDC3-203ENST00000332245 1494 ntTSL 2 BASIC13.75□□□□□ -0.21
CDH12P55289 HIST1H2AC-203ENST00000602637 1462 ntAPPRIS P1 TSL 2 BASIC13.75□□□□□ -0.21
CDH12P55289 ATG14-201ENST00000247178 4742 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
CDH12P55289 NICN1-201ENST00000273598 2616 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
CDH12P55289 TET3-201ENST00000305799 5174 ntTSL 5 BASIC13.75□□□□□ -0.21
CDH12P55289 MFAP4-202ENST00000395592 1932 ntAPPRIS ALT2 TSL 1 (best) BASIC13.75□□□□□ -0.21
CDH12P55289 C11orf52-201ENST00000278601 1141 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
CDH12P55289 TSFM-201ENST00000323833 1218 ntAPPRIS ALT2 TSL 1 (best) BASIC13.75□□□□□ -0.21
CDH12P55289 KCNK7-201ENST00000340313 1298 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
CDH12P55289 C1orf43-205ENST00000368519 1163 ntTSL 2 BASIC13.75□□□□□ -0.21
CDH12P55289 ADM2-201ENST00000395737 535 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
CDH12P55289 LSM5-207ENST00000410044 687 ntTSL 3 BASIC13.75□□□□□ -0.21
CDH12P55289 RAB34-206ENST00000415040 1293 ntTSL 2 BASIC13.75□□□□□ -0.21
CDH12P55289 SOCS2P1-201ENST00000417727 557 ntBASIC13.75□□□□□ -0.21
CDH12P55289 AL121601.1-201ENST00000426367 326 ntTSL 2 BASIC13.75□□□□□ -0.21
CDH12P55289 AL161785.3-201ENST00000435157 395 ntTSL 3 BASIC13.75□□□□□ -0.21
CDH12P55289 LINC01818-201ENST00000437118 368 ntTSL 2 BASIC13.75□□□□□ -0.21
CDH12P55289 AC114812.1-204ENST00000449669 728 ntBASIC13.75□□□□□ -0.21
CDH12P55289 PRKAG2-AS1-202ENST00000467458 1064 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
CDH12P55289 AJ271736.1-201ENST00000483543 773 ntTSL 5 BASIC13.75□□□□□ -0.21
CDH12P55289 AC022616.1-201ENST00000518688 554 ntBASIC13.75□□□□□ -0.21
CDH12P55289 AP002008.1-201ENST00000530283 1155 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
CDH12P55289 AC008750.2-202ENST00000532688 729 ntTSL 3 BASIC13.75□□□□□ -0.21
CDH12P55289 LINC01089-209ENST00000542933 1220 ntTSL 3 BASIC13.75□□□□□ -0.21
CDH12P55289 AC009088.3-201ENST00000563605 357 ntTSL 3 BASIC13.75□□□□□ -0.21
CDH12P55289 ZNF83-215ENST00000600714 810 ntTSL 3 BASIC13.75□□□□□ -0.21
CDH12P55289 WDR17-205ENST00000508596 4294 ntAPPRIS ALT1 TSL 1 (best) BASIC13.75□□□□□ -0.21
CDH12P55289 ATXN7L1-207ENST00000477775 2426 ntTSL 2 BASIC13.75□□□□□ -0.21
CDH12P55289 SLC20A2-208ENST00000520262 2992 ntAPPRIS P1 TSL 2 BASIC13.75□□□□□ -0.21
CDH12P55289 SALL4P5-201ENST00000419001 1760 ntBASIC13.75□□□□□ -0.21
CDH12P55289 NUP153-203ENST00000613258 5811 ntAPPRIS ALT2 TSL 1 (best) BASIC13.75□□□□□ -0.21
CDH12P55289 TATDN3-201ENST00000366973 2321 ntAPPRIS ALT1 TSL 1 (best) BASIC13.75□□□□□ -0.21
CDH12P55289 ATCAY-201ENST00000450849 5070 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
CDH12P55289 DBN1-203ENST00000393565 2701 ntAPPRIS ALT2 TSL 5 BASIC13.75□□□□□ -0.21
CDH12P55289 ASPH-202ENST00000379449 1603 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
CDH12P55289 SREBF1-202ENST00000355815 4253 ntAPPRIS ALT2 TSL 1 (best) BASIC13.75□□□□□ -0.21
CDH12P55289 ANGPTL2-202ENST00000373425 3707 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
CDH12P55289 AC012184.2-203ENST00000443119 2110 ntAPPRIS P1 TSL 5 BASIC13.75□□□□□ -0.21
CDH12P55289 ETV4-203ENST00000538265 2147 ntTSL 2 BASIC13.75□□□□□ -0.21
CDH12P55289 PAM-201ENST00000304400 3156 ntAPPRIS P3 TSL 1 (best) BASIC13.75□□□□□ -0.21
CDH12P55289 APBB1-219ENST00000608704 2095 ntTSL 5 BASIC13.75□□□□□ -0.21
CDH12P55289 EPHA2-201ENST00000358432 3964 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
CDH12P55289 RAP1GAP-211ENST00000495204 2489 ntAPPRIS ALT2 TSL 1 (best) BASIC13.74□□□□□ -0.21
CDH12P55289 AGER-206ENST00000375070 1463 ntTSL 5 BASIC13.74□□□□□ -0.21
CDH12P55289 AGER-208ENST00000438221 1493 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
CDH12P55289 VASH1-203ENST00000554237 1462 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
CDH12P55289 AC007541.1-201ENST00000570282 1469 ntBASIC13.74□□□□□ -0.21
CDH12P55289 LINC00221-202ENST00000619530 1499 ntTSL 2 BASIC13.74□□□□□ -0.21
CDH12P55289 AC079447.1-201ENST00000424491 1947 ntAPPRIS P1 TSL 2 BASIC13.74□□□□□ -0.21
CDH12P55289 SLC43A2-201ENST00000301335 8136 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
CDH12P55289 CEP295NL-205ENST00000619342 1866 ntTSL 5 BASIC13.74□□□□□ -0.21
CDH12P55289 THUMPD3-AS1-202ENST00000468186 3253 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
CDH12P55289 CERKL-206ENST00000410087 3208 ntAPPRIS ALT2 TSL 1 (best) BASIC13.74□□□□□ -0.21
CDH12P55289 TDH-201ENST00000525246 1357 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
CDH12P55289 AL136172.1-201ENST00000598590 1394 ntBASIC13.74□□□□□ -0.21
CDH12P55289 AC027288.3-202ENST00000550268 1820 ntTSL 2 BASIC13.74□□□□□ -0.21
CDH12P55289 AC093520.1-201ENST00000567545 1767 ntTSL 5 BASIC13.74□□□□□ -0.21
CDH12P55289 ADD3-202ENST00000356080 3081 ntAPPRIS P4 TSL 1 (best) BASIC13.74□□□□□ -0.21
CDH12P55289 HSD17B4-215ENST00000510025 2589 ntTSL 2 BASIC13.74□□□□□ -0.21
CDH12P55289 RPS15-201ENST00000233609 534 ntTSL 2 BASIC13.74□□□□□ -0.21
Retrieved 100 of 98,524 protein–RNA pairs in 60.4 ms