Protein–RNA interactions for Protein: P54764

EPHA4, Ephrin type-A receptor 4, humanhuman

Predictions only

Length 986 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
EPHA4P54764 AC068152.1-201ENST00000575930 685 ntTSL 5 BASIC14.13□□□□□ -0.15
EPHA4P54764 CENPX-208ENST00000584347 799 ntTSL 2 BASIC14.13□□□□□ -0.15
EPHA4P54764 ALKBH7-202ENST00000596657 603 ntTSL 2 BASIC14.13□□□□□ -0.15
EPHA4P54764 LINC01517-203ENST00000616194 908 ntTSL 5 BASIC14.13□□□□□ -0.15
EPHA4P54764 AC004706.3-207ENST00000634823 977 ntTSL 5 BASIC14.13□□□□□ -0.15
EPHA4P54764 KHK-201ENST00000260598 2397 ntAPPRIS P5 TSL 2 BASIC14.13□□□□□ -0.15
EPHA4P54764 BRD2-202ENST00000374831 4807 ntAPPRIS P3 TSL 1 (best) BASIC14.13□□□□□ -0.15
EPHA4P54764 CKMT1B-201ENST00000300283 1779 ntAPPRIS P1 TSL 5 BASIC14.13□□□□□ -0.15
EPHA4P54764 CKMT1A-204ENST00000434505 1779 ntAPPRIS P1 TSL 5 BASIC14.13□□□□□ -0.15
EPHA4P54764 AC022400.6-201ENST00000603027 5818 ntAPPRIS P5 TSL 2 BASIC14.13□□□□□ -0.15
EPHA4P54764 TAOK3-201ENST00000392533 4384 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
EPHA4P54764 ALOX15-202ENST00000570836 2784 ntAPPRIS P1 TSL 2 BASIC14.13□□□□□ -0.15
EPHA4P54764 EPS8L2-223ENST00000533256 3266 ntAPPRIS P2 TSL 5 BASIC14.13□□□□□ -0.15
EPHA4P54764 TEN1-CDK3-202ENST00000569284 3287 ntAPPRIS P1 TSL 2 BASIC14.13□□□□□ -0.15
EPHA4P54764 NFYA-202ENST00000353205 1660 ntTSL 5 BASIC14.13□□□□□ -0.15
EPHA4P54764 CLEC18A-201ENST00000288040 2155 ntAPPRIS P2 TSL 1 (best) BASIC14.13□□□□□ -0.15
EPHA4P54764 FBXO41-201ENST00000295133 6928 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
EPHA4P54764 ADAMTSL1-207ENST00000380566 2321 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
EPHA4P54764 PKD2L2-205ENST00000508638 2333 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
EPHA4P54764 TLL1-206ENST00000513213 1829 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
EPHA4P54764 OSTF1-201ENST00000346234 1319 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
EPHA4P54764 TMEM106A-202ENST00000541594 1330 ntTSL 2 BASIC14.13□□□□□ -0.15
EPHA4P54764 CALM1-216ENST00000626705 1341 ntTSL 5 BASIC14.13□□□□□ -0.15
EPHA4P54764 DYSF-201ENST00000258104 6796 ntAPPRIS P3 TSL 1 (best) BASIC14.13□□□□□ -0.15
EPHA4P54764 DYSF-204ENST00000409582 6790 ntAPPRIS ALT2 TSL 1 (best) BASIC14.13□□□□□ -0.15
EPHA4P54764 DYSF-210ENST00000413539 6769 ntAPPRIS ALT2 TSL 1 (best) BASIC14.13□□□□□ -0.15
EPHA4P54764 AEN-201ENST00000332810 3117 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
EPHA4P54764 CEP170B-202ENST00000414716 6705 ntAPPRIS P2 TSL 1 (best) BASIC14.12□□□□□ -0.15
EPHA4P54764 EGOT-201ENST00000414938 1464 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
EPHA4P54764 AC021683.3-202ENST00000592572 4440 ntTSL 5 BASIC14.12□□□□□ -0.15
EPHA4P54764 TBC1D2-201ENST00000342112 3046 ntTSL 2 BASIC14.12□□□□□ -0.15
EPHA4P54764 ATF7-205ENST00000548446 1892 ntAPPRIS ALT1 TSL 2 BASIC14.12□□□□□ -0.15
EPHA4P54764 SEC63-201ENST00000369002 6411 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
EPHA4P54764 COLEC11-203ENST00000382062 1633 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
EPHA4P54764 ANOS1-201ENST00000262648 6314 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
EPHA4P54764 TCL1A-203ENST00000554012 1391 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
EPHA4P54764 TOM1L2-202ENST00000379504 2418 ntAPPRIS P1 TSL 2 BASIC14.12□□□□□ -0.15
EPHA4P54764 SNAP91-213ENST00000521485 4521 ntAPPRIS ALT2 TSL 5 BASIC14.12□□□□□ -0.15
EPHA4P54764 KHSRPP1-201ENST00000427983 1768 ntBASIC14.12□□□□□ -0.15
EPHA4P54764 MARVELD1-201ENST00000285605 3221 ntAPPRIS P1 TSL 2 BASIC14.12□□□□□ -0.15
EPHA4P54764 LCOR-202ENST00000356016 4834 ntAPPRIS P3 TSL 2 BASIC14.12□□□□□ -0.15
EPHA4P54764 AC100803.3-201ENST00000606664 2961 ntTSL 5 BASIC14.12□□□□□ -0.15
EPHA4P54764 C4orf19-201ENST00000284437 1949 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
EPHA4P54764 SLC6A9-203ENST00000372306 1926 ntTSL 2 BASIC14.12□□□□□ -0.15
EPHA4P54764 LINC01250-201ENST00000457478 2344 ntTSL 2 BASIC14.12□□□□□ -0.15
EPHA4P54764 STAT1-202ENST00000392322 2716 ntAPPRIS ALT1 TSL 1 (best) BASIC14.12□□□□□ -0.15
EPHA4P54764 CRHR2-208ENST00000506074 3109 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
EPHA4P54764 MAP7-207ENST00000616617 4326 ntAPPRIS ALT2 TSL 5 BASIC14.12□□□□□ -0.15
EPHA4P54764 ZBTB32-202ENST00000392197 2068 ntAPPRIS P1 TSL 5 BASIC14.12□□□□□ -0.15
EPHA4P54764 AC018442.1-201ENST00000421439 2061 ntBASIC14.12□□□□□ -0.15
EPHA4P54764 ATP6V0E2-207ENST00000479613 1666 ntTSL 2 BASIC14.12□□□□□ -0.15
EPHA4P54764 PSMB5-202ENST00000361611 1294 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
EPHA4P54764 EDF1-202ENST00000371648 809 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
EPHA4P54764 CMC1-204ENST00000423894 549 ntTSL 2 BASIC14.12□□□□□ -0.15
EPHA4P54764 PSMB5-203ENST00000425762 900 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
EPHA4P54764 LAMA4-209ENST00000453937 645 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
EPHA4P54764 ATP6V1G2-210ENST00000483251 662 ntTSL 3 BASIC14.12□□□□□ -0.15
EPHA4P54764 LEF1-AS1-204ENST00000508266 559 ntTSL 4 BASIC14.12□□□□□ -0.15
EPHA4P54764 AC008443.1-201ENST00000511331 1000 ntTSL 3 BASIC14.12□□□□□ -0.15
EPHA4P54764 IGHVIII-5-2-201ENST00000522505 261 ntBASIC14.12□□□□□ -0.15
EPHA4P54764 TP53AIP1-204ENST00000530777 363 ntAPPRIS ALT2 TSL 1 (best) BASIC14.12□□□□□ -0.15
EPHA4P54764 SNHG14-213ENST00000551077 638 ntTSL 5 BASIC14.12□□□□□ -0.15
EPHA4P54764 AC009065.3-201ENST00000562027 627 ntTSL 5 BASIC14.12□□□□□ -0.15
EPHA4P54764 LINC01922-201ENST00000562582 719 ntBASIC14.12□□□□□ -0.15
EPHA4P54764 NPLOC4-209ENST00000572760 946 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
EPHA4P54764 AC145207.3-201ENST00000576784 529 ntTSL 5 BASIC14.12□□□□□ -0.15
EPHA4P54764 AC011825.3-201ENST00000583184 565 ntTSL 5 BASIC14.12□□□□□ -0.15
EPHA4P54764 MIR3188-201ENST00000583494 85 ntBASIC14.12□□□□□ -0.15
EPHA4P54764 AC020922.3-201ENST00000595064 547 ntBASIC14.12□□□□□ -0.15
EPHA4P54764 HCG18-245ENST00000602550 559 ntTSL 4 BASIC14.12□□□□□ -0.15
EPHA4P54764 TMEM117-201ENST00000266534 2758 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
EPHA4P54764 LHFPL2-207ENST00000515007 4680 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
EPHA4P54764 AKAP1-201ENST00000314126 2380 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
EPHA4P54764 KIRREL1-202ENST00000360089 3304 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
EPHA4P54764 KIAA1614-AS1-201ENST00000415647 1440 ntTSL 2 BASIC14.12□□□□□ -0.15
EPHA4P54764 SURF6-201ENST00000372022 4447 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
EPHA4P54764 DCBLD1-202ENST00000338728 3626 ntAPPRIS ALT2 TSL 5 BASIC14.12□□□□□ -0.15
EPHA4P54764 MEOX1-202ENST00000329168 2129 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
EPHA4P54764 LILRP2-201ENST00000413439 2127 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
EPHA4P54764 PDPK1-202ENST00000342085 7241 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
EPHA4P54764 DIABLO-201ENST00000267169 1316 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
EPHA4P54764 OSBP2-209ENST00000438716 2747 ntAPPRIS ALT2 TSL 2 BASIC14.12□□□□□ -0.15
EPHA4P54764 MFSD14B-201ENST00000375344 3420 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
EPHA4P54764 RNF135-202ENST00000328381 2892 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
EPHA4P54764 FAM160B1-203ENST00000369250 2870 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
EPHA4P54764 CNST-203ENST00000366513 5126 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
EPHA4P54764 FAM160A2-203ENST00000524416 3327 ntTSL 2 BASIC14.12□□□□□ -0.15
EPHA4P54764 ARMCX6-207ENST00000538627 1758 ntAPPRIS P1 TSL 2 BASIC14.11□□□□□ -0.15
EPHA4P54764 RGPD5-202ENST00000272454 2907 ntTSL 2 BASIC14.11□□□□□ -0.15
EPHA4P54764 F2RL1-201ENST00000296677 2914 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
EPHA4P54764 OPA1-204ENST00000361828 6381 ntAPPRIS ALT1 TSL 5 BASIC14.11□□□□□ -0.15
EPHA4P54764 SUOX-204ENST00000394115 2394 ntAPPRIS P1 TSL 2 BASIC14.11□□□□□ -0.15
EPHA4P54764 AP000439.3-201ENST00000545202 2376 ntTSL 2 BASIC14.11□□□□□ -0.15
EPHA4P54764 INPP5D-201ENST00000359570 5274 ntAPPRIS ALT2 TSL 1 (best) BASIC14.11□□□□□ -0.15
EPHA4P54764 BCAS4-201ENST00000358791 1378 ntAPPRIS ALT2 TSL 1 (best) BASIC14.11□□□□□ -0.15
EPHA4P54764 TOB1-AS1-201ENST00000416263 1351 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
EPHA4P54764 KLHL26-201ENST00000300976 4407 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
EPHA4P54764 PAK1IP1-201ENST00000379568 1800 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
EPHA4P54764 CLEC18C-210ENST00000569347 1970 ntAPPRIS P2 TSL 1 (best) BASIC14.11□□□□□ -0.15
EPHA4P54764 SLC22A7-202ENST00000372585 2555 ntAPPRIS P4 TSL 5 BASIC14.11□□□□□ -0.15
Retrieved 100 of 98,524 protein–RNA pairs in 30.6 ms