Protein–RNA interactions for Protein: P54760

EPHB4, Ephrin type-B receptor 4, humanhuman

Predictions only

Length 987 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
EPHB4P54760 SDR39U1-212ENST00000555365 976 ntTSL 3 BASIC16.56■□□□□ 0.24
EPHB4P54760 AC133919.1-201ENST00000562203 416 ntTSL 3 BASIC16.56■□□□□ 0.24
EPHB4P54760 MIR4754-201ENST00000582477 89 ntBASIC16.56■□□□□ 0.24
EPHB4P54760 AC005901.1-201ENST00000592766 552 ntTSL 4 BASIC16.56■□□□□ 0.24
EPHB4P54760 AC138466.3-201ENST00000619983 221 ntBASIC16.56■□□□□ 0.24
EPHB4P54760 AC092506.1-204ENST00000634888 1066 ntTSL 5 BASIC16.56■□□□□ 0.24
EPHB4P54760 PBX3-203ENST00000373487 2902 ntTSL 5 BASIC16.56■□□□□ 0.24
EPHB4P54760 LINC00639-201ENST00000553932 4496 ntTSL 2 BASIC16.56■□□□□ 0.24
EPHB4P54760 E2F6-211ENST00000542100 3450 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
EPHB4P54760 USP45-201ENST00000327681 6255 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
EPHB4P54760 USP19-203ENST00000398892 4622 ntAPPRIS ALT2 TSL 5 BASIC16.56■□□□□ 0.24
EPHB4P54760 SYP-201ENST00000263233 2498 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
EPHB4P54760 C5orf66-206ENST00000624272 2479 ntTSL 2 BASIC16.56■□□□□ 0.24
EPHB4P54760 SGK3-211ENST00000522398 3106 ntAPPRIS P1 TSL 5 BASIC16.56■□□□□ 0.24
EPHB4P54760 RTEL1-205ENST00000370018 4955 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
EPHB4P54760 PIKFYVE-202ENST00000308862 1640 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
EPHB4P54760 MED16-203ENST00000325464 2922 ntAPPRIS P2 TSL 5 BASIC16.56■□□□□ 0.24
EPHB4P54760 CHN2-201ENST00000222792 3530 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
EPHB4P54760 UNC13B-203ENST00000396787 5293 ntAPPRIS ALT2 TSL 5 BASIC16.55■□□□□ 0.24
EPHB4P54760 ZNF7-218ENST00000544249 2125 ntTSL 2 BASIC16.55■□□□□ 0.24
EPHB4P54760 CASC2-203ENST00000435944 3270 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
EPHB4P54760 FARP1-214ENST00000595437 4926 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
EPHB4P54760 HS2ST1-201ENST00000370550 6736 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
EPHB4P54760 ARV1-201ENST00000310256 1335 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
EPHB4P54760 ACTL7B-201ENST00000374667 2379 ntAPPRIS P1 BASIC16.55■□□□□ 0.24
EPHB4P54760 MAU2-201ENST00000262815 4994 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
EPHB4P54760 GSG1L-203ENST00000447459 4916 ntAPPRIS P3 TSL 2 BASIC16.55■□□□□ 0.24
EPHB4P54760 C1orf159-202ENST00000379320 2324 ntAPPRIS ALT2 TSL 2 BASIC16.55■□□□□ 0.24
EPHB4P54760 GAL-201ENST00000265643 818 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
EPHB4P54760 S100A2-203ENST00000368709 457 ntAPPRIS P1 TSL 3 BASIC16.55■□□□□ 0.24
EPHB4P54760 TMEM14B-202ENST00000379542 975 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
EPHB4P54760 CALCA-203ENST00000396372 581 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
EPHB4P54760 AL645937.2-201ENST00000396808 931 ntBASIC16.55■□□□□ 0.24
EPHB4P54760 HCFC1-AS1-201ENST00000438219 350 ntTSL 3 BASIC16.55■□□□□ 0.24
EPHB4P54760 PFN2-205ENST00000461868 613 ntTSL 2 BASIC16.55■□□□□ 0.24
EPHB4P54760 GLYCTK-204ENST00000471180 992 ntTSL 2 BASIC16.55■□□□□ 0.24
EPHB4P54760 AL157935.2-201ENST00000476274 1071 ntTSL 5 BASIC16.55■□□□□ 0.24
EPHB4P54760 RPL18P13-201ENST00000478088 569 ntBASIC16.55■□□□□ 0.24
EPHB4P54760 CTBP2P4-201ENST00000513884 920 ntBASIC16.55■□□□□ 0.24
EPHB4P54760 CPLX2-209ENST00000515094 576 ntAPPRIS P1 TSL 4 BASIC16.55■□□□□ 0.24
EPHB4P54760 TMEM218-205ENST00000527271 706 ntAPPRIS P1 TSL 2 BASIC16.55■□□□□ 0.24
EPHB4P54760 CDIP1-202ENST00000562334 1205 ntTSL 2 BASIC16.55■□□□□ 0.24
EPHB4P54760 SNORD3B-2-202ENST00000571722 791 ntBASIC16.55■□□□□ 0.24
EPHB4P54760 UPK1A-204ENST00000617999 1268 ntAPPRIS P1 TSL 5 BASIC16.55■□□□□ 0.24
EPHB4P54760 RAD51D-203ENST00000394589 2287 ntAPPRIS P1 TSL 5 BASIC16.55■□□□□ 0.24
EPHB4P54760 HDAC8-209ENST00000373589 1740 ntTSL 2 BASIC16.55■□□□□ 0.24
EPHB4P54760 LPO-210ENST00000582328 2680 ntAPPRIS ALT2 TSL 5 BASIC16.55■□□□□ 0.24
EPHB4P54760 MAPK7-204ENST00000395604 3077 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
EPHB4P54760 CEP131-203ENST00000450824 3543 ntAPPRIS ALT2 TSL 1 (best) BASIC16.55■□□□□ 0.24
EPHB4P54760 SLC13A5-203ENST00000433363 3435 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
EPHB4P54760 FAM49B-201ENST00000401979 2024 ntAPPRIS P1 TSL 2 BASIC16.55■□□□□ 0.24
EPHB4P54760 RPS6KL1-210ENST00000555647 3309 ntAPPRIS P1 TSL 5 BASIC16.55■□□□□ 0.24
EPHB4P54760 ANKLE2-210ENST00000542657 2446 ntTSL 2 BASIC16.55■□□□□ 0.24
EPHB4P54760 IL12A-201ENST00000305579 1522 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
EPHB4P54760 FXYD6-201ENST00000260282 1929 ntAPPRIS P2 TSL 1 (best) BASIC16.55■□□□□ 0.24
EPHB4P54760 B4GALT3-201ENST00000319769 1911 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
EPHB4P54760 C11orf16-201ENST00000326053 1908 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
EPHB4P54760 WRAP53-202ENST00000396463 1905 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
EPHB4P54760 CNTFR-204ENST00000610543 1926 ntAPPRIS P1 TSL 5 BASIC16.55■□□□□ 0.24
EPHB4P54760 OSBP2-209ENST00000438716 2747 ntAPPRIS ALT2 TSL 2 BASIC16.54■□□□□ 0.24
EPHB4P54760 BMP1-203ENST00000354870 3989 ntTSL 5 BASIC16.54■□□□□ 0.24
EPHB4P54760 MARK4-202ENST00000300843 5209 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
EPHB4P54760 SLC2A9-202ENST00000309065 1866 ntAPPRIS ALT2 TSL 1 (best) BASIC16.54■□□□□ 0.24
EPHB4P54760 AEN-201ENST00000332810 3117 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
EPHB4P54760 TGFB1I1-203ENST00000394863 1898 ntAPPRIS ALT1 TSL 1 (best) BASIC16.54■□□□□ 0.24
EPHB4P54760 PLAG1-203ENST00000429357 1899 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
EPHB4P54760 MIR600HG-201ENST00000449175 5984 ntBASIC16.54■□□□□ 0.24
EPHB4P54760 UHRF1-204ENST00000616255 2661 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
EPHB4P54760 SHISA6-204ENST00000441885 7575 ntAPPRIS P3 TSL 5 BASIC16.54■□□□□ 0.24
EPHB4P54760 PHLDA1-203ENST00000619060 5913 ntAPPRIS P2 TSL 1 (best) BASIC16.54■□□□□ 0.24
EPHB4P54760 ZNF706-201ENST00000311212 2615 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
EPHB4P54760 AC092384.2-204ENST00000565053 2566 ntTSL 2 BASIC16.54■□□□□ 0.24
EPHB4P54760 USP37-202ENST00000338465 1771 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
EPHB4P54760 TC2N-206ENST00000556018 1770 ntTSL 2 BASIC16.54■□□□□ 0.24
EPHB4P54760 PPIL3-201ENST00000286175 1370 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
EPHB4P54760 RNFT2-203ENST00000392549 2896 ntAPPRIS P1 TSL 5 BASIC16.54■□□□□ 0.24
EPHB4P54760 CXorf40B-202ENST00000370404 1316 ntAPPRIS P2 TSL 2 BASIC16.54■□□□□ 0.24
EPHB4P54760 ERN2-202ENST00000457008 3169 ntAPPRIS ALT2 TSL 1 (best) BASIC16.54■□□□□ 0.24
EPHB4P54760 PRRT2-207ENST00000572820 2403 ntAPPRIS P1 TSL 5 BASIC16.54■□□□□ 0.24
EPHB4P54760 PIGT-246ENST00000639499 2021 ntTSL 5 BASIC16.54■□□□□ 0.24
EPHB4P54760 MUC1-203ENST00000342482 537 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
EPHB4P54760 TOMM7-201ENST00000358435 778 ntAPPRIS P2 TSL 1 (best) BASIC16.54■□□□□ 0.24
EPHB4P54760 CNR1-201ENST00000362094 1252 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
EPHB4P54760 RN7SKP214-201ENST00000364208 315 ntBASIC16.54■□□□□ 0.24
EPHB4P54760 C10orf62-201ENST00000370640 1208 ntAPPRIS P1 BASIC16.54■□□□□ 0.24
EPHB4P54760 IGLJ3-201ENST00000390324 176 ntAPPRIS P1 BASIC16.54■□□□□ 0.24
EPHB4P54760 DNAJB1P1-201ENST00000429417 1024 ntBASIC16.54■□□□□ 0.24
EPHB4P54760 LYPLAL1-AS1-201ENST00000441331 724 ntTSL 3 BASIC16.54■□□□□ 0.24
EPHB4P54760 PRKRA-211ENST00000487082 1211 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
EPHB4P54760 AC093627.5-203ENST00000497320 746 ntTSL 2 BASIC16.54■□□□□ 0.24
EPHB4P54760 ELOF1-202ENST00000586120 658 ntAPPRIS P1 TSL 3 BASIC16.54■□□□□ 0.24
EPHB4P54760 INO80C-210ENST00000590757 595 ntTSL 2 BASIC16.54■□□□□ 0.24
EPHB4P54760 RNASEK-210ENST00000593646 566 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
EPHB4P54760 AC010503.1-201ENST00000596027 520 ntTSL 5 BASIC16.54■□□□□ 0.24
EPHB4P54760 AC007718.1-201ENST00000621078 280 ntBASIC16.54■□□□□ 0.24
EPHB4P54760 ADAMTS14-202ENST00000373208 5269 ntAPPRIS P4 TSL 2 BASIC16.54■□□□□ 0.24
EPHB4P54760 CA12-202ENST00000344366 2744 ntAPPRIS ALT2 TSL 1 (best) BASIC16.54■□□□□ 0.24
EPHB4P54760 AC023024.2-201ENST00000623561 1993 ntBASIC16.54■□□□□ 0.24
EPHB4P54760 RAB37-206ENST00000392615 2655 ntTSL 3 BASIC16.54■□□□□ 0.24
EPHB4P54760 NRG2-209ENST00000541337 3723 ntTSL 5 BASIC16.54■□□□□ 0.24
Retrieved 100 of 98,524 protein–RNA pairs in 63.5 ms