Protein–RNA interactions for Protein: P52945

PDX1, Pancreas/duodenum homeobox protein 1, humanhuman

Predictions only

Length 283 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDX1P52945 ZNF497-201ENST00000311044 3468 ntAPPRIS P1 TSL 2 BASIC14.28□□□□□ -0.12
PDX1P52945 FAM110C-201ENST00000327669 3760 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
PDX1P52945 NUDT1-201ENST00000339737 698 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
PDX1P52945 NUDT1-202ENST00000343985 771 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
PDX1P52945 CAMKK2-203ENST00000347034 5218 ntAPPRIS ALT2 TSL 1 (best) BASIC14.28□□□□□ -0.12
PDX1P52945 ATP6V1H-202ENST00000359530 2007 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
PDX1P52945 EDF1-202ENST00000371648 809 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
PDX1P52945 TCEAL6-201ENST00000372773 983 ntAPPRIS P1 TSL 3 BASIC14.28□□□□□ -0.12
PDX1P52945 FBXO44-203ENST00000376760 822 ntTSL 2 BASIC14.28□□□□□ -0.12
PDX1P52945 NQO2-202ENST00000380430 1098 ntAPPRIS P1 TSL 5 BASIC14.28□□□□□ -0.12
PDX1P52945 IGF1-203ENST00000392904 761 ntTSL 5 BASIC14.28□□□□□ -0.12
PDX1P52945 ANKDD1A-203ENST00000395723 1250 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
PDX1P52945 RPL14-202ENST00000396203 916 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
PDX1P52945 SERPINE3-201ENST00000400389 1218 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
PDX1P52945 AL590617.2-201ENST00000432673 917 ntTSL 3 BASIC14.28□□□□□ -0.12
PDX1P52945 AC006335.1-201ENST00000445200 547 ntBASIC14.28□□□□□ -0.12
PDX1P52945 TARBP2-203ENST00000456234 1368 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
PDX1P52945 SERPINA3-203ENST00000467132 2660 ntAPPRIS P1 TSL 2 BASIC14.28□□□□□ -0.12
PDX1P52945 SLC41A3-211ENST00000508835 1480 ntTSL 2 BASIC14.28□□□□□ -0.12
PDX1P52945 LINC02405-201ENST00000512624 1361 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
PDX1P52945 GPBAR1-203ENST00000521462 1465 ntAPPRIS P1 TSL 2 BASIC14.28□□□□□ -0.12
PDX1P52945 C11orf16-202ENST00000525780 1685 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
PDX1P52945 PCDHA3-202ENST00000532566 4594 ntBASIC14.28□□□□□ -0.12
PDX1P52945 CNN3-207ENST00000545882 1902 ntTSL 2 BASIC14.28□□□□□ -0.12
PDX1P52945 AC138123.2-203ENST00000552451 653 ntTSL 3 BASIC14.28□□□□□ -0.12
PDX1P52945 AC242376.1-201ENST00000559033 726 ntBASIC14.28□□□□□ -0.12
PDX1P52945 CARHSP1-203ENST00000561530 729 ntAPPRIS P1 TSL 3 BASIC14.28□□□□□ -0.12
PDX1P52945 AC012508.2-201ENST00000567613 1472 ntBASIC14.28□□□□□ -0.12
PDX1P52945 NFIX-208ENST00000587260 1537 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
PDX1P52945 SRD5A3-AS1-211ENST00000599135 737 ntTSL 5 BASIC14.28□□□□□ -0.12
PDX1P52945 ZNF586-206ENST00000599802 581 ntTSL 3 BASIC14.28□□□□□ -0.12
PDX1P52945 NEAT1-203ENST00000601801 487 ntTSL 4 BASIC14.28□□□□□ -0.12
PDX1P52945 TLDC2-203ENST00000602922 1179 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
PDX1P52945 RER1-209ENST00000605895 3044 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
PDX1P52945 AC234782.2-201ENST00000614615 1240 ntTSL 2 BASIC14.28□□□□□ -0.12
PDX1P52945 LINC01517-203ENST00000616194 908 ntTSL 5 BASIC14.28□□□□□ -0.12
PDX1P52945 PSMD13-215ENST00000621534 1572 ntTSL 5 BASIC14.28□□□□□ -0.12
PDX1P52945 ATP6AP2-213ENST00000636251 1877 ntAPPRIS ALT2 TSL 5 BASIC14.28□□□□□ -0.12
PDX1P52945 AMT-239ENST00000636865 1914 ntTSL 5 BASIC14.28□□□□□ -0.12
PDX1P52945 SORCS1-201ENST00000263054 7272 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
PDX1P52945 ZNF618-207ENST00000615615 9289 ntAPPRIS ALT2 TSL 1 (best) BASIC14.28□□□□□ -0.12
PDX1P52945 FBXL19-202ENST00000380310 3796 ntAPPRIS P2 TSL 2 BASIC14.28□□□□□ -0.12
PDX1P52945 MGEA5-201ENST00000357797 3263 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
PDX1P52945 FCHO1-206ENST00000594202 3214 ntTSL 5 BASIC14.28□□□□□ -0.12
PDX1P52945 SUPT20H-212ENST00000475892 2836 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
PDX1P52945 SAFB-205ENST00000588852 2842 ntAPPRIS ALT2 TSL 1 (best) BASIC14.28□□□□□ -0.12
PDX1P52945 C6orf120-201ENST00000332290 2667 ntAPPRIS P1 BASIC14.28□□□□□ -0.12
PDX1P52945 PKN2-201ENST00000316005 2632 ntTSL 5 BASIC14.28□□□□□ -0.12
PDX1P52945 TP53I11-208ENST00000525680 2647 ntAPPRIS P1 TSL 2 BASIC14.28□□□□□ -0.12
PDX1P52945 KIF26B-202ENST00000407071 7287 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
PDX1P52945 PLEKHN1-201ENST00000379407 2194 ntAPPRIS ALT2 TSL 1 (best) BASIC14.27□□□□□ -0.12
PDX1P52945 PIMREG-205ENST00000572447 1948 ntAPPRIS P3 TSL 1 (best) BASIC14.27□□□□□ -0.12
PDX1P52945 CNTFR-204ENST00000610543 1926 ntAPPRIS P1 TSL 5 BASIC14.27□□□□□ -0.12
PDX1P52945 CRB2-201ENST00000359999 3659 ntTSL 2 BASIC14.27□□□□□ -0.12
PDX1P52945 GPKOW-201ENST00000156109 1742 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
PDX1P52945 CKM-201ENST00000221476 1657 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
PDX1P52945 PEF1-201ENST00000373703 1629 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
PDX1P52945 SPG21-203ENST00000433215 1613 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
PDX1P52945 MVK-214ENST00000629016 1591 ntTSL 5 BASIC14.27□□□□□ -0.12
PDX1P52945 CRLF2-201ENST00000381566 1545 ntAPPRIS P1 TSL 5 BASIC14.27□□□□□ -0.12
PDX1P52945 GPR84-201ENST00000267015 1497 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
PDX1P52945 SLC51A-201ENST00000296327 1463 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
PDX1P52945 SLAIN1-216ENST00000488699 1461 ntTSL 2 BASIC14.27□□□□□ -0.12
PDX1P52945 RNFT2-203ENST00000392549 2896 ntAPPRIS P1 TSL 5 BASIC14.27□□□□□ -0.12
PDX1P52945 FETUB-207ENST00000450521 1410 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
PDX1P52945 FAM90A7P-201ENST00000382628 1395 ntBASIC14.27□□□□□ -0.12
PDX1P52945 FAM90A23P-201ENST00000400136 1395 ntBASIC14.27□□□□□ -0.12
PDX1P52945 OR2I1P-209ENST00000641730 5365 ntBASIC14.27□□□□□ -0.12
PDX1P52945 COCH-203ENST00000460581 2688 ntTSL 2 BASIC14.27□□□□□ -0.12
PDX1P52945 RHOXF1-201ENST00000217999 769 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
PDX1P52945 RN7SKP214-201ENST00000364208 315 ntBASIC14.27□□□□□ -0.13
PDX1P52945 BEX2-201ENST00000372674 668 ntAPPRIS P1 TSL 2 BASIC14.27□□□□□ -0.13
PDX1P52945 ARL16-201ENST00000397498 1227 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
PDX1P52945 LIMS1-206ENST00000414829 439 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
PDX1P52945 FAM58BP-201ENST00000439056 645 ntBASIC14.27□□□□□ -0.13
PDX1P52945 LINC02046-201ENST00000469812 378 ntTSL 3 BASIC14.27□□□□□ -0.13
PDX1P52945 AC091390.4-201ENST00000484974 491 ntTSL 3 BASIC14.27□□□□□ -0.13
PDX1P52945 LIMS3-205ENST00000487150 782 ntTSL 3 BASIC14.27□□□□□ -0.13
PDX1P52945 PRSS30P-205ENST00000506153 699 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
PDX1P52945 AP001547.1-201ENST00000527440 374 ntTSL 3 BASIC14.27□□□□□ -0.13
PDX1P52945 AC117500.3-201ENST00000537032 666 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
PDX1P52945 AL132642.1-201ENST00000557646 553 ntTSL 4 BASIC14.27□□□□□ -0.13
PDX1P52945 MIR4754-201ENST00000582477 89 ntBASIC14.27□□□□□ -0.13
PDX1P52945 NDUFB5-216ENST00000611971 951 ntTSL 2 BASIC14.27□□□□□ -0.13
PDX1P52945 ARL16-214ENST00000621051 1181 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
PDX1P52945 LINC00969-254ENST00000625358 962 ntTSL 5 BASIC14.27□□□□□ -0.13
PDX1P52945 TSEN2-201ENST00000284995 2381 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
PDX1P52945 CCNL1-202ENST00000295926 2388 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
PDX1P52945 ZNF618-201ENST00000288466 9109 ntAPPRIS P3 TSL 2 BASIC14.27□□□□□ -0.13
PDX1P52945 EML1-201ENST00000262233 4535 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
PDX1P52945 TRIM29-210ENST00000528870 2217 ntTSL 2 BASIC14.27□□□□□ -0.13
PDX1P52945 WFIKKN2-202ENST00000426127 2193 ntTSL 2 BASIC14.27□□□□□ -0.13
PDX1P52945 ZNF180-202ENST00000391956 3049 ntAPPRIS ALT2 TSL 2 BASIC14.27□□□□□ -0.13
PDX1P52945 MAU2-201ENST00000262815 4994 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
PDX1P52945 GRB7-203ENST00000394209 1955 ntAPPRIS P1 TSL 2 BASIC14.27□□□□□ -0.13
PDX1P52945 CDH23-201ENST00000224721 11139 ntAPPRIS P5 TSL 5 BASIC14.27□□□□□ -0.13
PDX1P52945 CDH23-214ENST00000622827 11122 ntAPPRIS ALT1 TSL 5 BASIC14.27□□□□□ -0.13
PDX1P52945 GPER1-201ENST00000297469 2778 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
PDX1P52945 RALGDS-202ENST00000372050 3634 ntAPPRIS P3 TSL 1 (best) BASIC14.27□□□□□ -0.13
PDX1P52945 ZMYND10-202ENST00000360165 1757 ntAPPRIS ALT1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Retrieved 100 of 98,524 protein–RNA pairs in 71.4 ms