Protein–RNA interactions for Protein: P52655

GTF2A1, Transcription initiation factor IIA subunit 1, humanhuman

Predicted RBP Predictions only

Length 376 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GTF2A1P52655 MARVELD2-201ENST00000325631 2153 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
GTF2A1P52655 PDZRN3-205ENST00000466780 2737 ntTSL 2 BASIC14.44□□□□□ -0.1
GTF2A1P52655 MAGEA2-209ENST00000623806 2025 ntAPPRIS P1 TSL 2 BASIC14.44□□□□□ -0.1
GTF2A1P52655 PRMT7-201ENST00000339507 4238 ntAPPRIS P1 TSL 2 BASIC14.44□□□□□ -0.1
GTF2A1P52655 STXBP5L-201ENST00000273666 9496 ntAPPRIS P3 TSL 1 (best) BASIC14.44□□□□□ -0.1
GTF2A1P52655 DOK1-202ENST00000340004 1722 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
GTF2A1P52655 WRAP53-210ENST00000534050 1736 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
GTF2A1P52655 CPPED1-202ENST00000381774 6273 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
GTF2A1P52655 PISD-202ENST00000382151 2669 ntAPPRIS P2 TSL 5 BASIC14.44□□□□□ -0.1
GTF2A1P52655 ALDOA-209ENST00000563060 1550 ntAPPRIS P2 TSL 1 (best) BASIC14.44□□□□□ -0.1
GTF2A1P52655 PLEKHA7-202ENST00000355661 4980 ntAPPRIS P2 TSL 1 (best) BASIC14.44□□□□□ -0.1
GTF2A1P52655 XRCC1-202ENST00000543982 1994 ntTSL 2 BASIC14.44□□□□□ -0.1
GTF2A1P52655 S1PR1-201ENST00000305352 2909 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
GTF2A1P52655 PRPF40B-202ENST00000380281 3154 ntAPPRIS ALT2 TSL 1 (best) BASIC14.44□□□□□ -0.1
GTF2A1P52655 GRIA4-210ENST00000527669 2647 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
GTF2A1P52655 HJURP-204ENST00000432087 3027 ntAPPRIS ALT2 TSL 2 BASIC14.44□□□□□ -0.1
GTF2A1P52655 ARMC10P1-201ENST00000313754 855 ntBASIC14.44□□□□□ -0.1
GTF2A1P52655 LYPLA2-204ENST00000374505 907 ntTSL 3 BASIC14.44□□□□□ -0.1
GTF2A1P52655 CLDN14-205ENST00000399139 1231 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
GTF2A1P52655 CBX7-202ENST00000401405 784 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
GTF2A1P52655 NPY-203ENST00000407573 705 ntAPPRIS P1 TSL 3 BASIC14.44□□□□□ -0.1
GTF2A1P52655 HCG4-201ENST00000418983 998 ntBASIC14.44□□□□□ -0.1
GTF2A1P52655 EEF1E1-205ENST00000507463 654 ntTSL 2 BASIC14.44□□□□□ -0.1
GTF2A1P52655 FOSL1P1-201ENST00000511041 816 ntBASIC14.44□□□□□ -0.1
GTF2A1P52655 KRT18P21-201ENST00000515767 1272 ntBASIC14.44□□□□□ -0.1
GTF2A1P52655 LINC02237-202ENST00000521904 477 ntTSL 3 BASIC14.44□□□□□ -0.1
GTF2A1P52655 SSSCA1-206ENST00000531405 879 ntTSL 2 BASIC14.44□□□□□ -0.1
GTF2A1P52655 FIBP-212ENST00000533045 1173 ntTSL 5 BASIC14.44□□□□□ -0.1
GTF2A1P52655 ARAP1-AS1-201ENST00000542022 388 ntTSL 5 BASIC14.44□□□□□ -0.1
GTF2A1P52655 AC087388.1-201ENST00000571370 1112 ntBASIC14.44□□□□□ -0.1
GTF2A1P52655 IER2-202ENST00000587885 1291 ntAPPRIS P1 TSL 3 BASIC14.44□□□□□ -0.1
GTF2A1P52655 DHRS4L2-211ENST00000621761 1049 ntTSL 5 BASIC14.44□□□□□ -0.1
GTF2A1P52655 AL805961.1-202ENST00000641562 540 ntBASIC14.44□□□□□ -0.1
GTF2A1P52655 ZNF384-201ENST00000319770 3266 ntTSL 2 BASIC14.44□□□□□ -0.1
GTF2A1P52655 VWA5B1-201ENST00000289815 4475 ntAPPRIS ALT2 TSL 5 BASIC14.44□□□□□ -0.1
GTF2A1P52655 COQ6-220ENST00000629426 1538 ntTSL 5 BASIC14.44□□□□□ -0.1
GTF2A1P52655 ANTXR2-203ENST00000403729 8273 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
GTF2A1P52655 STK25-235ENST00000543554 2556 ntTSL 2 BASIC14.44□□□□□ -0.1
GTF2A1P52655 SPATA2-201ENST00000289431 4022 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
GTF2A1P52655 BBS1-202ENST00000393994 1790 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
GTF2A1P52655 TOR1AIP1-212ENST00000606911 8704 ntAPPRIS P3 TSL 1 (best) BASIC14.44□□□□□ -0.1
GTF2A1P52655 CNN2-202ENST00000348419 2033 ntTSL 2 BASIC14.44□□□□□ -0.1
GTF2A1P52655 TXLNG-202ENST00000398155 3998 ntAPPRIS ALT2 TSL 1 (best) BASIC14.44□□□□□ -0.1
GTF2A1P52655 TRAF6-202ENST00000526995 4627 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
GTF2A1P52655 CAPN3-207ENST00000397200 1643 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
GTF2A1P52655 ANXA11-201ENST00000265447 2526 ntAPPRIS ALT2 TSL 5 BASIC14.44□□□□□ -0.1
GTF2A1P52655 HPSE2-202ENST00000370549 2121 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
GTF2A1P52655 SKP2-209ENST00000620197 3255 ntTSL 2 BASIC14.44□□□□□ -0.1
GTF2A1P52655 ARHGAP45-203ENST00000543365 3750 ntAPPRIS ALT2 TSL 2 BASIC14.44□□□□□ -0.1
GTF2A1P52655 BTNL8-206ENST00000508408 1717 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
GTF2A1P52655 ALDH4A1-202ENST00000375341 3363 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
GTF2A1P52655 AL359510.2-201ENST00000624958 2249 ntBASIC14.43□□□□□ -0.1
GTF2A1P52655 FOXK1-201ENST00000328914 11181 ntAPPRIS P1 TSL 2 BASIC14.43□□□□□ -0.1
GTF2A1P52655 CERCAM-213ENST00000612334 1554 ntAPPRIS ALT2 TSL 5 BASIC14.43□□□□□ -0.1
GTF2A1P52655 BTNL8-202ENST00000340184 2071 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
GTF2A1P52655 HYLS1-202ENST00000425380 2061 ntAPPRIS P1 TSL 3 BASIC14.43□□□□□ -0.1
GTF2A1P52655 AC008758.4-201ENST00000435033 2593 ntAPPRIS P1 TSL 2 BASIC14.43□□□□□ -0.1
GTF2A1P52655 CDH16-204ENST00000565796 2694 ntTSL 2 BASIC14.43□□□□□ -0.1
GTF2A1P52655 DSN1-204ENST00000426836 2441 ntAPPRIS P3 TSL 2 BASIC14.43□□□□□ -0.1
GTF2A1P52655 TCN2-202ENST00000405742 1936 ntAPPRIS ALT2 TSL 5 BASIC14.43□□□□□ -0.1
GTF2A1P52655 AC093899.2-201ENST00000513963 1935 ntAPPRIS P1 TSL 2 BASIC14.43□□□□□ -0.1
GTF2A1P52655 PYCR2-201ENST00000343818 1689 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
GTF2A1P52655 RETREG3-201ENST00000309428 3759 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
GTF2A1P52655 POLL-203ENST00000370162 2792 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
GTF2A1P52655 SHMT2-201ENST00000328923 2537 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
GTF2A1P52655 CR2-203ENST00000367059 3877 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
GTF2A1P52655 ITIH5-201ENST00000397145 3132 ntTSL 2 BASIC14.43□□□□□ -0.1
GTF2A1P52655 MAP4-204ENST00000395734 5590 ntAPPRIS ALT2 TSL 2 BASIC14.43□□□□□ -0.1
GTF2A1P52655 MTERF2-201ENST00000240050 1790 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
GTF2A1P52655 ATE1-208ENST00000540606 5165 ntTSL 2 BASIC14.43□□□□□ -0.1
GTF2A1P52655 PXMP4-201ENST00000217398 979 ntTSL 2 BASIC14.43□□□□□ -0.1
GTF2A1P52655 SIT1-201ENST00000259608 1231 ntAPPRIS P2 TSL 1 (best) BASIC14.43□□□□□ -0.1
GTF2A1P52655 AL355310.2-201ENST00000369843 688 ntTSL 3 BASIC14.43□□□□□ -0.1
GTF2A1P52655 CXCL12-204ENST00000395793 665 ntTSL 5 BASIC14.43□□□□□ -0.1
GTF2A1P52655 GGT1-204ENST00000401885 968 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
GTF2A1P52655 DMKN-206ENST00000418261 1257 ntAPPRIS ALT2 TSL 1 (best) BASIC14.43□□□□□ -0.1
GTF2A1P52655 CYHR1-203ENST00000424149 1162 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
GTF2A1P52655 UBXN10-AS1-201ENST00000442226 510 ntTSL 2 BASIC14.43□□□□□ -0.1
GTF2A1P52655 MSRA-206ENST00000521209 814 ntTSL 3 BASIC14.43□□□□□ -0.1
GTF2A1P52655 AC067930.3-201ENST00000524808 701 ntTSL 3 BASIC14.43□□□□□ -0.1
GTF2A1P52655 AC116612.1-201ENST00000557144 562 ntTSL 3 BASIC14.43□□□□□ -0.1
GTF2A1P52655 AC087645.4-201ENST00000638890 792 ntTSL 5 BASIC14.43□□□□□ -0.1
GTF2A1P52655 PTPN11-207ENST00000639857 801 ntTSL 5 BASIC14.43□□□□□ -0.1
GTF2A1P52655 SLC38A4-201ENST00000266579 2728 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
GTF2A1P52655 ATP6AP2-213ENST00000636251 1877 ntAPPRIS ALT2 TSL 5 BASIC14.43□□□□□ -0.1
GTF2A1P52655 IFNLR1-201ENST00000327535 4549 ntAPPRIS P4 TSL 1 (best) BASIC14.43□□□□□ -0.1
GTF2A1P52655 ACSF3-201ENST00000317447 3664 ntAPPRIS P1 TSL 2 BASIC14.43□□□□□ -0.1
GTF2A1P52655 CCDC88C-204ENST00000389857 7474 ntAPPRIS P1 TSL 5 BASIC14.43□□□□□ -0.1
GTF2A1P52655 KRT85-202ENST00000544265 1387 ntTSL 2 BASIC14.43□□□□□ -0.1
GTF2A1P52655 IRF8-203ENST00000563180 1394 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
GTF2A1P52655 PPARD-205ENST00000448077 3516 ntTSL 2 BASIC14.43□□□□□ -0.1
GTF2A1P52655 ZBTB11-201ENST00000312938 6020 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
GTF2A1P52655 GNB5-203ENST00000396335 2678 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
GTF2A1P52655 LINC01164-201ENST00000341866 3384 ntTSL 2 BASIC14.43□□□□□ -0.1
GTF2A1P52655 UCN2-201ENST00000273610 1481 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
GTF2A1P52655 PFDN4-201ENST00000371419 1462 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
GTF2A1P52655 VIPR2-202ENST00000377633 1491 ntTSL 2 BASIC14.43□□□□□ -0.1
GTF2A1P52655 CES4A-203ENST00000535696 1472 ntTSL 2 BASIC14.43□□□□□ -0.1
GTF2A1P52655 CU639417.6-202ENST00000624872 3241 ntTSL 5 BASIC14.43□□□□□ -0.1
GTF2A1P52655 AC008620.2-201ENST00000510294 1569 ntBASIC14.43□□□□□ -0.1
Retrieved 100 of 98,524 protein–RNA pairs in 54.1 ms