Protein–RNA interactions for Protein: P49759

CLK1, Dual specificity protein kinase CLK1, humanhuman

Known RBP Predictions only

Length 484 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLK1P49759 BRI3BPP1-201ENST00000594224 787 ntBASIC13.94□□□□□ -0.18
CLK1P49759 AC092364.2-202ENST00000597012 1073 ntBASIC13.94□□□□□ -0.18
CLK1P49759 TMEM261P1-201ENST00000604899 340 ntBASIC13.94□□□□□ -0.18
CLK1P49759 AC004790.1-201ENST00000612686 536 ntBASIC13.94□□□□□ -0.18
CLK1P49759 GDAP1L1-206ENST00000537864 2855 ntTSL 2 BASIC13.94□□□□□ -0.18
CLK1P49759 SLC23A1-201ENST00000348729 2299 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
CLK1P49759 FAM122B-202ENST00000343004 4326 ntAPPRIS ALT2 TSL 1 (best) BASIC13.94□□□□□ -0.18
CLK1P49759 ACOX1-201ENST00000293217 7514 ntAPPRIS P5 TSL 1 (best) BASIC13.94□□□□□ -0.18
CLK1P49759 HIC2-203ENST00000443632 6940 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
CLK1P49759 GNAS-215ENST00000371102 3438 ntTSL 5 BASIC13.94□□□□□ -0.18
CLK1P49759 C9orf3-202ENST00000297979 2820 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
CLK1P49759 PELP1-202ENST00000436683 3524 ntTSL 2 BASIC13.94□□□□□ -0.18
CLK1P49759 FUT1-201ENST00000310160 4246 ntAPPRIS P1 TSL 5 BASIC13.94□□□□□ -0.18
CLK1P49759 ALPK3-201ENST00000258888 10917 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
CLK1P49759 TCAF2-202ENST00000411935 2906 ntTSL 5 BASIC13.94□□□□□ -0.18
CLK1P49759 OSBPL5-202ENST00000348039 2798 ntTSL 2 BASIC13.94□□□□□ -0.18
CLK1P49759 ERAP1-201ENST00000296754 5495 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
CLK1P49759 MGMT-201ENST00000306010 1759 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
CLK1P49759 DISC1-206ENST00000366637 6848 ntAPPRIS ALT2 TSL 5 BASIC13.93□□□□□ -0.18
CLK1P49759 RAB38-201ENST00000243662 1465 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
CLK1P49759 RASGEF1A-202ENST00000374459 3264 ntAPPRIS ALT2 TSL 2 BASIC13.93□□□□□ -0.18
CLK1P49759 SLC22A12-202ENST00000377567 2599 ntTSL 5 BASIC13.93□□□□□ -0.18
CLK1P49759 AFF1-201ENST00000307808 9390 ntAPPRIS P3 TSL 1 (best) BASIC13.93□□□□□ -0.18
CLK1P49759 AC109583.3-201ENST00000641183 3128 ntAPPRIS P1 BASIC13.93□□□□□ -0.18
CLK1P49759 HBP1-212ENST00000485846 2420 ntAPPRIS P1 TSL 2 BASIC13.93□□□□□ -0.18
CLK1P49759 CICP11-201ENST00000434745 2827 ntBASIC13.93□□□□□ -0.18
CLK1P49759 OSBP2-219ENST00000535268 3248 ntTSL 2 BASIC13.93□□□□□ -0.18
CLK1P49759 CYP26B1-201ENST00000001146 4732 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
CLK1P49759 METTL17-202ENST00000382985 1586 ntAPPRIS ALT2 TSL 1 (best) BASIC13.93□□□□□ -0.18
CLK1P49759 MAP7D3-201ENST00000316077 4567 ntAPPRIS P3 TSL 1 (best) BASIC13.93□□□□□ -0.18
CLK1P49759 JMJD6-208ENST00000617192 5517 ntTSL 5 BASIC13.93□□□□□ -0.18
CLK1P49759 CEACAM19-202ENST00000403660 1982 ntAPPRIS P3 TSL 1 (best) BASIC13.93□□□□□ -0.18
CLK1P49759 FAM120C-201ENST00000328235 3716 ntAPPRIS ALT2 TSL 1 (best) BASIC13.93□□□□□ -0.18
CLK1P49759 MRPL16-201ENST00000300151 1182 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
CLK1P49759 ETFB-201ENST00000309244 900 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
CLK1P49759 CXorf40A-201ENST00000359293 974 ntAPPRIS P3 TSL 2 BASIC13.93□□□□□ -0.18
CLK1P49759 ACTA1-201ENST00000366683 1122 ntTSL 5 BASIC13.93□□□□□ -0.18
CLK1P49759 LYPLA2-201ENST00000374501 1117 ntTSL 2 BASIC13.93□□□□□ -0.18
CLK1P49759 AC236430.1-201ENST00000402231 743 ntBASIC13.93□□□□□ -0.18
CLK1P49759 ARHGEF26-AS1-201ENST00000467912 628 ntTSL 3 BASIC13.93□□□□□ -0.18
CLK1P49759 AC004066.1-201ENST00000502488 802 ntBASIC13.93□□□□□ -0.18
CLK1P49759 AC021491.2-201ENST00000513017 607 ntTSL 3 BASIC13.93□□□□□ -0.18
CLK1P49759 LAT-209ENST00000564277 921 ntAPPRIS ALT2 TSL 5 BASIC13.93□□□□□ -0.18
CLK1P49759 AL132655.2-201ENST00000596276 594 ntBASIC13.93□□□□□ -0.18
CLK1P49759 ZNF83-215ENST00000600714 810 ntTSL 3 BASIC13.93□□□□□ -0.18
CLK1P49759 YTHDF3-AS1-201ENST00000603538 718 ntBASIC13.93□□□□□ -0.18
CLK1P49759 PDCD6-212ENST00000614778 1050 ntTSL 2 BASIC13.93□□□□□ -0.18
CLK1P49759 C7orf57-203ENST00000430738 2056 ntTSL 5 BASIC13.93□□□□□ -0.18
CLK1P49759 ANO10-205ENST00000414522 2450 ntTSL 2 BASIC13.93□□□□□ -0.18
CLK1P49759 LINC00863-201ENST00000439559 3287 ntTSL 5 BASIC13.93□□□□□ -0.18
CLK1P49759 PTK7-203ENST00000345201 4071 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
CLK1P49759 FAM168B-202ENST00000409185 5285 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
CLK1P49759 BICDL2-204ENST00000573514 3519 ntTSL 2 BASIC13.93□□□□□ -0.18
CLK1P49759 PRSS16-203ENST00000421826 1949 ntTSL 2 BASIC13.93□□□□□ -0.18
CLK1P49759 ACP5-202ENST00000412435 1527 ntAPPRIS P1 TSL 2 BASIC13.93□□□□□ -0.18
CLK1P49759 FURIN-206ENST00000610579 4191 ntAPPRIS P1 TSL 5 BASIC13.93□□□□□ -0.18
CLK1P49759 PPFIA4-203ENST00000367240 6434 ntAPPRIS P5 TSL 5 BASIC13.93□□□□□ -0.18
CLK1P49759 HOXA3-207ENST00000612286 3396 ntAPPRIS P1 TSL 2 BASIC13.93□□□□□ -0.18
CLK1P49759 PPP1R3D-201ENST00000370996 3630 ntAPPRIS P1 BASIC13.93□□□□□ -0.18
CLK1P49759 HNRNPR-204ENST00000427764 1788 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
CLK1P49759 MCC-202ENST00000408903 3476 ntAPPRIS P1 TSL 2 BASIC13.93□□□□□ -0.18
CLK1P49759 BIRC5-203ENST00000374948 2446 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
CLK1P49759 GOLGA6L2-201ENST00000312015 1379 ntAPPRIS ALT2 TSL 2 BASIC13.93□□□□□ -0.18
CLK1P49759 STYXL1-203ENST00000359697 1374 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
CLK1P49759 LRRC20-204ENST00000373224 3095 ntAPPRIS P1 TSL 2 BASIC13.93□□□□□ -0.18
CLK1P49759 CSF1-201ENST00000329608 4210 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
CLK1P49759 UBL7-AS1-203ENST00000564621 1612 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
CLK1P49759 LSS-211ENST00000522411 2523 ntTSL 2 BASIC13.93□□□□□ -0.18
CLK1P49759 LIMS1-202ENST00000338045 1876 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
CLK1P49759 VILL-202ENST00000383759 2787 ntAPPRIS P1 TSL 5 BASIC13.93□□□□□ -0.18
CLK1P49759 WASHC5-202ENST00000517845 3667 ntTSL 2 BASIC13.93□□□□□ -0.18
CLK1P49759 CDKN1A-208ENST00000615513 2102 ntAPPRIS P1 TSL 2 BASIC13.93□□□□□ -0.18
CLK1P49759 LHCGR-202ENST00000401907 1477 ntTSL 5 BASIC13.93□□□□□ -0.18
CLK1P49759 ZBTB45P1-201ENST00000452761 1456 ntBASIC13.93□□□□□ -0.18
CLK1P49759 EHF-210ENST00000531794 1481 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
CLK1P49759 XPOT-201ENST00000332707 6414 ntAPPRIS P1 TSL 2 BASIC13.92□□□□□ -0.18
CLK1P49759 MGRN1-203ENST00000415496 6405 ntAPPRIS ALT2 TSL 1 (best) BASIC13.92□□□□□ -0.18
CLK1P49759 CACNA2D2-204ENST00000424201 5206 ntAPPRIS P3 TSL 1 (best) BASIC13.92□□□□□ -0.18
CLK1P49759 SEPT11-206ENST00000505788 2079 ntAPPRIS ALT1 TSL 5 BASIC13.92□□□□□ -0.18
CLK1P49759 DUSP10-201ENST00000366899 2676 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
CLK1P49759 DRD5P1-201ENST00000456605 1438 ntBASIC13.92□□□□□ -0.18
CLK1P49759 MFAP3-201ENST00000322602 2891 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
CLK1P49759 PML-203ENST00000354026 2885 ntAPPRIS ALT2 TSL 1 (best) BASIC13.92□□□□□ -0.18
CLK1P49759 SESN3-203ENST00000536441 9558 ntAPPRIS P1 TSL 2 BASIC13.92□□□□□ -0.18
CLK1P49759 SYCE1-202ENST00000343131 1113 ntAPPRIS ALT2 TSL 1 (best) BASIC13.92□□□□□ -0.18
CLK1P49759 LCE3E-201ENST00000368789 611 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
CLK1P49759 PDGFB-202ENST00000381551 1125 ntTSL 5 BASIC13.92□□□□□ -0.18
CLK1P49759 RTN4RL2-202ENST00000395120 582 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
CLK1P49759 AL645937.2-201ENST00000396808 931 ntBASIC13.92□□□□□ -0.18
CLK1P49759 METTL21A-202ENST00000406927 1103 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
CLK1P49759 AC134915.1-201ENST00000426461 574 ntBASIC13.92□□□□□ -0.18
CLK1P49759 TMEM176B-202ENST00000429904 1206 ntAPPRIS P1 TSL 2 BASIC13.92□□□□□ -0.18
CLK1P49759 HMGN1P19-201ENST00000436976 333 ntBASIC13.92□□□□□ -0.18
CLK1P49759 PRSS48-202ENST00000455694 989 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
CLK1P49759 TUBB3-203ENST00000553967 736 ntTSL 2 BASIC13.92□□□□□ -0.18
CLK1P49759 PIMREG-202ENST00000570337 891 ntTSL 5 BASIC13.92□□□□□ -0.18
CLK1P49759 PIMREG-203ENST00000571373 1002 ntTSL 3 BASIC13.92□□□□□ -0.18
CLK1P49759 MIF4GD-206ENST00000579119 856 ntTSL 3 BASIC13.92□□□□□ -0.18
CLK1P49759 TUBB6-203ENST00000586653 788 ntTSL 2 BASIC13.92□□□□□ -0.18
CLK1P49759 AL049840.4-201ENST00000602422 811 ntBASIC13.92□□□□□ -0.18
Retrieved 100 of 98,524 protein–RNA pairs in 124 ms