Protein–RNA interactions for Protein: P48065

SLC6A12, Sodium- and chloride-dependent betaine transporter, humanhuman

Predictions only

Length 614 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC6A12P48065 AC245123.1-202ENST00000612422 1719 ntTSL 5 BASIC14.12□□□□□ -0.15
SLC6A12P48065 ZNF280D-207ENST00000559237 4902 ntAPPRIS ALT2 TSL 1 (best) BASIC14.12□□□□□ -0.15
SLC6A12P48065 AC118344.1-201ENST00000378432 1462 ntTSL 2 BASIC14.12□□□□□ -0.15
SLC6A12P48065 TRIM67-201ENST00000366653 3936 ntAPPRIS P2 TSL 1 (best) BASIC14.12□□□□□ -0.15
SLC6A12P48065 VRK3-217ENST00000599538 2126 ntAPPRIS P3 TSL 1 (best) BASIC14.12□□□□□ -0.15
SLC6A12P48065 LINC00479-201ENST00000412102 2033 ntTSL 2 BASIC14.12□□□□□ -0.15
SLC6A12P48065 CRCP-201ENST00000338592 1393 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
SLC6A12P48065 RANBP1-208ENST00000430524 1389 ntTSL 3 BASIC14.12□□□□□ -0.15
SLC6A12P48065 KCNC1-201ENST00000265969 4295 ntAPPRIS P1 TSL 5 BASIC14.12□□□□□ -0.15
SLC6A12P48065 TAF4B-203ENST00000578121 3204 ntAPPRIS ALT2 TSL 2 BASIC14.12□□□□□ -0.15
SLC6A12P48065 ELL-201ENST00000262809 4027 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
SLC6A12P48065 USP45-201ENST00000327681 6255 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
SLC6A12P48065 DIAPH2-204ENST00000373054 3376 ntAPPRIS ALT2 TSL 5 BASIC14.12□□□□□ -0.15
SLC6A12P48065 ITPR3-201ENST00000374316 9870 ntAPPRIS P1 TSL 5 BASIC14.12□□□□□ -0.15
SLC6A12P48065 AL359915.2-205ENST00000418015 1529 ntTSL 2 BASIC14.12□□□□□ -0.15
SLC6A12P48065 CCT7-201ENST00000258091 1916 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
SLC6A12P48065 FAM219A-204ENST00000379081 3543 ntTSL 5 BASIC14.12□□□□□ -0.15
SLC6A12P48065 MYRF-203ENST00000389602 2052 ntTSL 2 BASIC14.12□□□□□ -0.15
SLC6A12P48065 ITSN1-205ENST00000381291 5437 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
SLC6A12P48065 HIST1H1B-201ENST00000331442 681 ntAPPRIS P1 BASIC14.12□□□□□ -0.15
SLC6A12P48065 GBGT1-202ENST00000372038 847 ntTSL 3 BASIC14.12□□□□□ -0.15
SLC6A12P48065 SPEG-202ENST00000396686 1086 ntTSL 3 BASIC14.12□□□□□ -0.15
SLC6A12P48065 ALG1L2-201ENST00000425059 969 ntAPPRIS P1 TSL 5 BASIC14.12□□□□□ -0.15
SLC6A12P48065 HLA-V-201ENST00000429037 534 ntBASIC14.12□□□□□ -0.15
SLC6A12P48065 RALY-AS1-203ENST00000440595 660 ntTSL 3 BASIC14.12□□□□□ -0.15
SLC6A12P48065 IQCF3-202ENST00000440739 505 ntAPPRIS P1 TSL 2 BASIC14.12□□□□□ -0.15
SLC6A12P48065 AC092800.1-201ENST00000449492 579 ntTSL 2 BASIC14.12□□□□□ -0.15
SLC6A12P48065 AL392046.1-202ENST00000457255 521 ntTSL 5 BASIC14.12□□□□□ -0.15
SLC6A12P48065 STAG3L5P-205ENST00000473757 1255 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
SLC6A12P48065 FLJ27354-203ENST00000526694 851 ntTSL 2 BASIC14.12□□□□□ -0.15
SLC6A12P48065 RAB40B-202ENST00000538809 704 ntTSL 2 BASIC14.12□□□□□ -0.15
SLC6A12P48065 AC008969.1-205ENST00000553254 876 ntTSL 2 BASIC14.12□□□□□ -0.15
SLC6A12P48065 AC126696.1-201ENST00000561567 756 ntTSL 3 BASIC14.12□□□□□ -0.15
SLC6A12P48065 NAT9-212ENST00000581136 1011 ntAPPRIS P1 TSL 2 BASIC14.12□□□□□ -0.15
SLC6A12P48065 LINC01887-202ENST00000584734 860 ntTSL 3 BASIC14.12□□□□□ -0.15
SLC6A12P48065 TNNT1-212ENST00000588981 1163 ntAPPRIS P3 TSL 1 (best) BASIC14.12□□□□□ -0.15
SLC6A12P48065 FBXL12-211ENST00000591009 1005 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
SLC6A12P48065 COPS9-205ENST00000607357 418 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
SLC6A12P48065 MIR6720-201ENST00000611664 98 ntBASIC14.12□□□□□ -0.15
SLC6A12P48065 AC244157.2-201ENST00000616239 1006 ntBASIC14.12□□□□□ -0.15
SLC6A12P48065 ACER2-201ENST00000340967 2238 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
SLC6A12P48065 TNN-203ENST00000622870 3719 ntTSL 5 BASIC14.12□□□□□ -0.15
SLC6A12P48065 ATP2B3-202ENST00000349466 4280 ntAPPRIS P1 TSL 5 BASIC14.12□□□□□ -0.15
SLC6A12P48065 KLK5-202ENST00000391809 1405 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
SLC6A12P48065 CCNF-202ENST00000397066 4283 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
SLC6A12P48065 LRRC17-202ENST00000339431 1963 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
SLC6A12P48065 RNF222-202ENST00000399398 3062 ntAPPRIS P1 TSL 5 BASIC14.12□□□□□ -0.15
SLC6A12P48065 PGLYRP4-202ENST00000368739 2116 ntAPPRIS ALT1 TSL 5 BASIC14.12□□□□□ -0.15
SLC6A12P48065 CLEC16A-202ENST00000409552 3365 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
SLC6A12P48065 WIZ-207ENST00000599910 4609 ntAPPRIS ALT2 TSL 5 BASIC14.12□□□□□ -0.15
SLC6A12P48065 NUDT16-203ENST00000537561 5943 ntTSL 5 BASIC14.12□□□□□ -0.15
SLC6A12P48065 UROD-201ENST00000246337 1300 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
SLC6A12P48065 PSMD8-209ENST00000602911 1330 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
SLC6A12P48065 AL008718.2-201ENST00000609206 1313 ntBASIC14.12□□□□□ -0.15
SLC6A12P48065 C7orf72-201ENST00000297001 2028 ntAPPRIS P1 TSL 5 BASIC14.12□□□□□ -0.15
SLC6A12P48065 ADAM23-202ENST00000374415 2714 ntAPPRIS ALT1 TSL 5 BASIC14.12□□□□□ -0.15
SLC6A12P48065 AC005523.2-201ENST00000601192 3568 ntTSL 4 BASIC14.12□□□□□ -0.15
SLC6A12P48065 NUMB-216ENST00000555394 3037 ntAPPRIS ALT1 TSL 1 (best) BASIC14.12□□□□□ -0.15
SLC6A12P48065 ELOA2-202ENST00000620522 1641 ntAPPRIS ALT2 TSL 5 BASIC14.12□□□□□ -0.15
SLC6A12P48065 SH2D3C-206ENST00000429553 2794 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
SLC6A12P48065 DNAAF5-202ENST00000403952 1907 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
SLC6A12P48065 TBC1D3-201ENST00000620215 2063 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
SLC6A12P48065 TBC1D3C-201ENST00000622206 2063 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
SLC6A12P48065 C1R-201ENST00000535233 2211 ntTSL 2 BASIC14.11□□□□□ -0.15
SLC6A12P48065 ECE1-201ENST00000264205 2381 ntAPPRIS P4 TSL 1 (best) BASIC14.11□□□□□ -0.15
SLC6A12P48065 SLC41A1-201ENST00000367137 4997 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
SLC6A12P48065 LPO-210ENST00000582328 2680 ntAPPRIS ALT2 TSL 5 BASIC14.11□□□□□ -0.15
SLC6A12P48065 OSCP1-204ENST00000433045 1381 ntTSL 5 BASIC14.11□□□□□ -0.15
SLC6A12P48065 SNRPN-202ENST00000390687 1528 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
SLC6A12P48065 SEMA5B-206ENST00000451055 4579 ntAPPRIS ALT2 TSL 2 BASIC14.11□□□□□ -0.15
SLC6A12P48065 NIPAL3-202ENST00000339255 1676 ntTSL 5 BASIC14.11□□□□□ -0.15
SLC6A12P48065 SPO11-203ENST00000371263 1834 ntAPPRIS P4 TSL 1 (best) BASIC14.11□□□□□ -0.15
SLC6A12P48065 SLC6A12-207ENST00000536824 2101 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
SLC6A12P48065 GLUL-202ENST00000331872 4364 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
SLC6A12P48065 ITGB4-206ENST00000579662 5554 ntAPPRIS ALT2 TSL 1 (best) BASIC14.11□□□□□ -0.15
SLC6A12P48065 MARVELD3-201ENST00000268485 2912 ntAPPRIS P3 TSL 1 (best) BASIC14.11□□□□□ -0.15
SLC6A12P48065 PBX3-201ENST00000342287 2755 ntAPPRIS ALT1 TSL 5 BASIC14.11□□□□□ -0.15
SLC6A12P48065 FAS-202ENST00000352159 1722 ntTSL 5 BASIC14.11□□□□□ -0.15
SLC6A12P48065 SSR4-204ENST00000370087 745 ntAPPRIS P1 TSL 3 BASIC14.11□□□□□ -0.15
SLC6A12P48065 MRPL43-206ENST00000370236 866 ntAPPRIS P1 TSL 2 BASIC14.11□□□□□ -0.15
SLC6A12P48065 MRPL43-207ENST00000370241 824 ntTSL 5 BASIC14.11□□□□□ -0.15
SLC6A12P48065 RPF1-202ENST00000370656 724 ntTSL 2 BASIC14.11□□□□□ -0.15
SLC6A12P48065 RCC1-201ENST00000373831 1577 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
SLC6A12P48065 COBL-203ENST00000395542 5339 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
SLC6A12P48065 RPL14-202ENST00000396203 916 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
SLC6A12P48065 P3H2-AS1-201ENST00000412203 730 ntTSL 5 BASIC14.11□□□□□ -0.15
SLC6A12P48065 AL357497.1-201ENST00000436249 666 ntTSL 3 BASIC14.11□□□□□ -0.15
SLC6A12P48065 AC022210.1-201ENST00000449856 793 ntBASIC14.11□□□□□ -0.15
SLC6A12P48065 GPR53P-205ENST00000457298 1084 ntBASIC14.11□□□□□ -0.15
SLC6A12P48065 RCE1-204ENST00000525356 1270 ntTSL 5 BASIC14.11□□□□□ -0.15
SLC6A12P48065 HILS1-202ENST00000545329 423 ntBASIC14.11□□□□□ -0.15
SLC6A12P48065 GPR84-202ENST00000551809 2041 ntAPPRIS P1 BASIC14.11□□□□□ -0.15
SLC6A12P48065 RNF41-210ENST00000552244 716 ntTSL 3 BASIC14.11□□□□□ -0.15
SLC6A12P48065 AL022313.4-201ENST00000562756 2046 ntBASIC14.11□□□□□ -0.15
SLC6A12P48065 EEF1DP1-201ENST00000585891 896 ntBASIC14.11□□□□□ -0.15
SLC6A12P48065 AC010336.6-201ENST00000595107 528 ntTSL 4 BASIC14.11□□□□□ -0.15
SLC6A12P48065 Z98259.2-201ENST00000641583 609 ntBASIC14.11□□□□□ -0.15
SLC6A12P48065 PAPSS2-202ENST00000456849 3856 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
SLC6A12P48065 ZMIZ2-202ENST00000309315 5144 ntAPPRIS P4 TSL 2 BASIC14.11□□□□□ -0.15
SLC6A12P48065 ANKRD42-201ENST00000260047 2514 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
Retrieved 100 of 98,524 protein–RNA pairs in 48.2 ms