Protein–RNA interactions for Protein: P33552

CKS2, Cyclin-dependent kinases regulatory subunit 2, humanhuman

Predictions only

Length 79 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CKS2P33552 TRPC6-201ENST00000344327 4612 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
CKS2P33552 CEP295NL-205ENST00000619342 1866 ntTSL 5 BASIC10.87□□□□□ -0.67
CKS2P33552 MAGEA1-201ENST00000356661 1710 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
CKS2P33552 AL139193.2-201ENST00000553712 1954 ntTSL 1 (best) BASIC10.86□□□□□ -0.67
CKS2P33552 IKZF1-211ENST00000440768 5511 ntTSL 5 BASIC10.86□□□□□ -0.67
CKS2P33552 FAAP100-202ENST00000425898 2996 ntTSL 1 (best) BASIC10.86□□□□□ -0.67
CKS2P33552 FOXM1-210ENST00000627656 3487 ntAPPRIS ALT1 TSL 1 (best) BASIC10.86□□□□□ -0.67
CKS2P33552 ATP6AP2-233ENST00000638153 1303 ntAPPRIS ALT2 TSL 5 BASIC10.86□□□□□ -0.67
CKS2P33552 AC104407.1-201ENST00000511017 1568 ntTSL 3 BASIC10.86□□□□□ -0.67
CKS2P33552 PIK3CD-202ENST00000377346 5203 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
CKS2P33552 PPP4R3B-203ENST00000611717 5243 ntAPPRIS P3 TSL 1 (best) BASIC10.86□□□□□ -0.67
CKS2P33552 ANXA9-201ENST00000368947 1826 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
CKS2P33552 AC215219.1-201ENST00000400706 1817 ntBASIC10.86□□□□□ -0.67
CKS2P33552 STX1A-201ENST00000222812 2095 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
CKS2P33552 ERICH6-201ENST00000295910 2052 ntAPPRIS P3 TSL 1 (best) BASIC10.86□□□□□ -0.67
CKS2P33552 STX1A-204ENST00000395156 2050 ntTSL 1 (best) BASIC10.86□□□□□ -0.67
CKS2P33552 UGP2-207ENST00000467648 2057 ntTSL 1 (best) BASIC10.86□□□□□ -0.67
CKS2P33552 RSPO1-202ENST00000401068 2320 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
CKS2P33552 HELLS-202ENST00000348459 3099 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
CKS2P33552 TMEM25-201ENST00000313236 2409 ntAPPRIS P3 TSL 1 (best) BASIC10.86□□□□□ -0.67
CKS2P33552 STRADA-243ENST00000640086 1925 ntTSL 5 BASIC10.86□□□□□ -0.67
CKS2P33552 PYCR2-201ENST00000343818 1689 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
CKS2P33552 LINC01864-201ENST00000587218 1661 ntTSL 1 (best) BASIC10.86□□□□□ -0.67
CKS2P33552 SLIT2-204ENST00000504154 6390 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
CKS2P33552 MBP-204ENST00000382582 2281 ntTSL 1 (best) BASIC10.86□□□□□ -0.67
CKS2P33552 FAM219A-207ENST00000379089 3624 ntAPPRIS ALT1 TSL 3 BASIC10.86□□□□□ -0.67
CKS2P33552 RFWD3-201ENST00000361070 4957 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
CKS2P33552 UNC5CL-201ENST00000244565 3136 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
CKS2P33552 AL022326.1-201ENST00000434516 1778 ntTSL 2 BASIC10.86□□□□□ -0.67
CKS2P33552 HAL-202ENST00000538703 2637 ntTSL 2 BASIC10.86□□□□□ -0.67
CKS2P33552 AL121723.1-201ENST00000445194 1519 ntBASIC10.86□□□□□ -0.67
CKS2P33552 PIK3R5-220ENST00000623421 4318 ntTSL 1 (best) BASIC10.86□□□□□ -0.67
CKS2P33552 SCML4-203ENST00000369022 2377 ntTSL 2 BASIC10.86□□□□□ -0.67
CKS2P33552 AHCY-205ENST00000538132 2366 ntTSL 2 BASIC10.86□□□□□ -0.67
CKS2P33552 SLC6A19-201ENST00000304460 5174 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
CKS2P33552 MOGAT3-201ENST00000223114 2132 ntAPPRIS P2 TSL 1 (best) BASIC10.86□□□□□ -0.67
CKS2P33552 NDUFS8-201ENST00000313468 791 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
CKS2P33552 HMGN4-201ENST00000377575 1225 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
CKS2P33552 SPCS2P4-201ENST00000436160 681 ntBASIC10.86□□□□□ -0.67
CKS2P33552 AC131097.3-202ENST00000439270 331 ntTSL 5 BASIC10.86□□□□□ -0.67
CKS2P33552 TSPY3-202ENST00000440483 414 ntTSL 5 BASIC10.86□□□□□ -0.67
CKS2P33552 SWI5-205ENST00000495313 466 ntAPPRIS ALT2 TSL 3 BASIC10.86□□□□□ -0.67
CKS2P33552 SMIM15-AS1-201ENST00000506902 796 ntTSL 3 BASIC10.86□□□□□ -0.67
CKS2P33552 AP005019.1-201ENST00000545254 664 ntTSL 3 BASIC10.86□□□□□ -0.67
CKS2P33552 AC011603.1-201ENST00000553174 717 ntTSL 2 BASIC10.86□□□□□ -0.67
CKS2P33552 SSH2-211ENST00000590153 570 ntTSL 4 BASIC10.86□□□□□ -0.67
CKS2P33552 AC243547.2-201ENST00000616257 234 ntTSL 3 BASIC10.86□□□□□ -0.67
CKS2P33552 LIN28B-AS1-205ENST00000637414 879 ntTSL 5 BASIC10.86□□□□□ -0.67
CKS2P33552 GTF2IRD2-201ENST00000451013 3558 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
CKS2P33552 AL137783.1-201ENST00000623494 1896 ntBASIC10.86□□□□□ -0.67
CKS2P33552 TDRD9-202ENST00000409874 4782 ntAPPRIS P1 TSL 5 BASIC10.86□□□□□ -0.67
CKS2P33552 TTYH3-204ENST00000407643 4537 ntTSL 5 BASIC10.86□□□□□ -0.67
CKS2P33552 ST5-256ENST00000534127 4545 ntAPPRIS P4 TSL 1 (best) BASIC10.86□□□□□ -0.67
CKS2P33552 CAMK2B-206ENST00000353625 1624 ntAPPRIS ALT1 TSL 1 (best) BASIC10.86□□□□□ -0.67
CKS2P33552 GAPVD1-205ENST00000394084 3190 ntTSL 1 (best) BASIC10.86□□□□□ -0.67
CKS2P33552 AL359075.1-201ENST00000476232 2921 ntTSL 1 (best) BASIC10.86□□□□□ -0.67
CKS2P33552 PIAS1-202ENST00000545237 2932 ntTSL 2 BASIC10.86□□□□□ -0.67
CKS2P33552 GP1BA-202ENST00000611961 2339 ntAPPRIS ALT2 TSL 5 BASIC10.86□□□□□ -0.67
CKS2P33552 COL16A1-202ENST00000373668 3643 ntTSL 2 BASIC10.86□□□□□ -0.67
CKS2P33552 WNK1-209ENST00000537687 11232 ntAPPRIS ALT2 TSL 5 BASIC10.86□□□□□ -0.67
CKS2P33552 ARAP3-207ENST00000626478 4928 ntTSL 5 BASIC10.86□□□□□ -0.67
CKS2P33552 NFE2L1-218ENST00000583378 2051 ntTSL 5 BASIC10.86□□□□□ -0.67
CKS2P33552 ARMCX2-201ENST00000328766 2762 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
CKS2P33552 CLK3P2-201ENST00000427566 1453 ntBASIC10.86□□□□□ -0.67
CKS2P33552 PLB1-205ENST00000422425 5115 ntAPPRIS ALT2 TSL 1 (best) BASIC10.86□□□□□ -0.67
CKS2P33552 PRSS54-201ENST00000219301 1810 ntAPPRIS P1 TSL 5 BASIC10.86□□□□□ -0.67
CKS2P33552 RBMS1-201ENST00000348849 4273 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
CKS2P33552 SPTB-203ENST00000389721 6705 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
CKS2P33552 PLOD2-202ENST00000360060 3665 ntAPPRIS ALT2 TSL 1 (best) BASIC10.86□□□□□ -0.67
CKS2P33552 CREB3L4-204ENST00000368603 1557 ntAPPRIS P3 TSL 1 (best) BASIC10.86□□□□□ -0.67
CKS2P33552 PATL2-207ENST00000560775 1913 ntAPPRIS P3 TSL 5 BASIC10.86□□□□□ -0.67
CKS2P33552 WASF3-202ENST00000361042 4823 ntTSL 1 (best) BASIC10.86□□□□□ -0.67
CKS2P33552 CPN2-202ENST00000429275 2008 ntAPPRIS P1 TSL 5 BASIC10.85□□□□□ -0.67
CKS2P33552 FGFR1-211ENST00000425967 5375 ntTSL 1 (best) BASIC10.85□□□□□ -0.67
CKS2P33552 CLIC4-201ENST00000374379 4346 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
CKS2P33552 PAX8-203ENST00000348715 3966 ntTSL 1 (best) BASIC10.85□□□□□ -0.67
CKS2P33552 STAG3L2-201ENST00000426587 2130 ntTSL 2 BASIC10.85□□□□□ -0.67
CKS2P33552 MYADML-201ENST00000474610 2147 ntBASIC10.85□□□□□ -0.67
CKS2P33552 VRK3-217ENST00000599538 2126 ntAPPRIS P3 TSL 1 (best) BASIC10.85□□□□□ -0.67
CKS2P33552 XIRP1-201ENST00000340369 6460 ntAPPRIS P3 TSL 1 (best) BASIC10.85□□□□□ -0.67
CKS2P33552 RBBP4-204ENST00000414241 1788 ntAPPRIS ALT1 TSL 1 (best) BASIC10.85□□□□□ -0.67
CKS2P33552 NCS1-201ENST00000372398 4991 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
CKS2P33552 NINL-203ENST00000422516 3801 ntAPPRIS ALT2 TSL 1 (best) BASIC10.85□□□□□ -0.67
CKS2P33552 OS9-218ENST00000551035 2246 ntTSL 2 BASIC10.85□□□□□ -0.67
CKS2P33552 CBLB-204ENST00000405772 3237 ntTSL 2 BASIC10.85□□□□□ -0.67
CKS2P33552 CSGALNACT1-211ENST00000522854 1990 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
CKS2P33552 TMEM104-204ENST00000582330 4679 ntAPPRIS P1 TSL 2 BASIC10.85□□□□□ -0.67
CKS2P33552 POTEI-201ENST00000451531 7020 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
CKS2P33552 CAMSAP3-201ENST00000160298 3889 ntAPPRIS P3 TSL 2 BASIC10.85□□□□□ -0.67
CKS2P33552 LARGE1-203ENST00000402320 3955 ntTSL 1 (best) BASIC10.85□□□□□ -0.67
CKS2P33552 COG5-201ENST00000297135 4060 ntAPPRIS P4 TSL 1 (best) BASIC10.85□□□□□ -0.67
CKS2P33552 SLC29A4-203ENST00000406453 2734 ntTSL 1 (best) BASIC10.85□□□□□ -0.67
CKS2P33552 TJAP1-208ENST00000438588 2716 ntTSL 5 BASIC10.85□□□□□ -0.67
CKS2P33552 GSN-209ENST00000449733 2702 ntTSL 2 BASIC10.85□□□□□ -0.67
CKS2P33552 FAM120B-205ENST00000630384 3721 ntAPPRIS ALT2 TSL 2 BASIC10.85□□□□□ -0.67
CKS2P33552 GZF1-202ENST00000377051 4740 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
CKS2P33552 CLTA-201ENST00000242285 1152 ntAPPRIS P4 TSL 1 (best) BASIC10.85□□□□□ -0.67
CKS2P33552 LTC4S-201ENST00000292596 666 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
CKS2P33552 TMEM270-201ENST00000320531 854 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
CKS2P33552 KLHL7-201ENST00000322275 969 ntTSL 1 (best) BASIC10.85□□□□□ -0.67
Retrieved 100 of 98,524 protein–RNA pairs in 45.9 ms