Protein–RNA interactions for Protein: P17655

CAPN2, Calpain-2 catalytic subunit, humanhuman

Predictions only

Length 700 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN2P17655 AC006064.4-201ENST00000602946 422 ntTSL 2 BASIC17.02■□□□□ 0.32
CAPN2P17655 UBE3A-207ENST00000614096 8741 ntAPPRIS ALT1 TSL 1 (best) BASIC17.02■□□□□ 0.32
CAPN2P17655 OR2I1P-209ENST00000641730 5365 ntBASIC17.02■□□□□ 0.32
CAPN2P17655 PAK2-201ENST00000327134 6139 ntAPPRIS P1 TSL 2 BASIC17.02■□□□□ 0.32
CAPN2P17655 ELAVL2-201ENST00000223951 3763 ntAPPRIS ALT1 TSL 1 (best) BASIC17.02■□□□□ 0.32
CAPN2P17655 TUBA8-202ENST00000330423 2018 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
CAPN2P17655 CCDC68-204ENST00000591504 4132 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
CAPN2P17655 ATP6V0A1-204ENST00000537728 2774 ntTSL 2 BASIC17.02■□□□□ 0.31
CAPN2P17655 HLA-DQB1-205ENST00000434651 1642 ntAPPRIS P1 BASIC17.02■□□□□ 0.31
CAPN2P17655 ARHGEF26-203ENST00000465817 2353 ntTSL 1 (best) BASIC17.02■□□□□ 0.31
CAPN2P17655 KCNQ2-209ENST00000625514 2925 ntTSL 5 BASIC17.02■□□□□ 0.31
CAPN2P17655 IBA57-201ENST00000366711 7817 ntAPPRIS P1 TSL 2 BASIC17.02■□□□□ 0.31
CAPN2P17655 MINDY4-201ENST00000265299 2733 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
CAPN2P17655 TPGS2-201ENST00000334295 4030 ntAPPRIS P3 TSL 1 (best) BASIC17.02■□□□□ 0.31
CAPN2P17655 LINC02495-201ENST00000508601 4167 ntTSL 2 BASIC17.02■□□□□ 0.31
CAPN2P17655 BNIP3-201ENST00000368636 2861 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
CAPN2P17655 MVK-214ENST00000629016 1591 ntTSL 5 BASIC17.02■□□□□ 0.31
CAPN2P17655 AC112229.3-201ENST00000603767 3202 ntAPPRIS P1 TSL 2 BASIC17.02■□□□□ 0.31
CAPN2P17655 AC013271.1-201ENST00000640669 3202 ntAPPRIS P1 TSL 2 BASIC17.02■□□□□ 0.31
CAPN2P17655 ZC3HAV1-204ENST00000471652 3182 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
CAPN2P17655 RCAN3-207ENST00000538532 2640 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
CAPN2P17655 HAL-202ENST00000538703 2637 ntTSL 2 BASIC17.01■□□□□ 0.31
CAPN2P17655 TOPAZ1-201ENST00000309765 5334 ntAPPRIS P1 TSL 5 BASIC17.01■□□□□ 0.31
CAPN2P17655 TMEM9-204ENST00000367334 1529 ntAPPRIS P3 TSL 1 (best) BASIC17.01■□□□□ 0.31
CAPN2P17655 AL359915.2-205ENST00000418015 1529 ntTSL 2 BASIC17.01■□□□□ 0.31
CAPN2P17655 TIFA-201ENST00000361717 4157 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
CAPN2P17655 LINC00552-201ENST00000625151 2579 ntBASIC17.01■□□□□ 0.31
CAPN2P17655 CLPTM1-202ENST00000541297 2732 ntTSL 2 BASIC17.01■□□□□ 0.31
CAPN2P17655 NFKB2-204ENST00000428099 3416 ntAPPRIS ALT1 TSL 1 (best) BASIC17.01■□□□□ 0.31
CAPN2P17655 IGDCC3-201ENST00000327987 4479 ntAPPRIS P2 TSL 1 (best) BASIC17.01■□□□□ 0.31
CAPN2P17655 AC097376.2-205ENST00000610159 5334 ntBASIC17.01■□□□□ 0.31
CAPN2P17655 NFATC1-207ENST00000545796 3558 ntTSL 2 BASIC17.01■□□□□ 0.31
CAPN2P17655 ZNF256-201ENST00000282308 2172 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
CAPN2P17655 RHD-206ENST00000423810 1637 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
CAPN2P17655 ACYP1-201ENST00000238618 627 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
CAPN2P17655 PBDC1-201ENST00000373357 977 ntTSL 2 BASIC17.01■□□□□ 0.31
CAPN2P17655 STAM-202ENST00000377524 2972 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
CAPN2P17655 AL627231.1-201ENST00000394467 1125 ntBASIC17.01■□□□□ 0.31
CAPN2P17655 RPL3-202ENST00000401609 1289 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
CAPN2P17655 MIR1227-201ENST00000408484 88 ntBASIC17.01■□□□□ 0.31
CAPN2P17655 AC097065.1-201ENST00000425737 517 ntBASIC17.01■□□□□ 0.31
CAPN2P17655 AL139246.4-201ENST00000442305 514 ntTSL 3 BASIC17.01■□□□□ 0.31
CAPN2P17655 RNMTL1P1-201ENST00000454103 560 ntBASIC17.01■□□□□ 0.31
CAPN2P17655 SIAH2-AS1-201ENST00000461943 441 ntTSL 4 BASIC17.01■□□□□ 0.31
CAPN2P17655 CDC23-208ENST00000505120 455 ntTSL 3 BASIC17.01■□□□□ 0.31
CAPN2P17655 AC116345.2-201ENST00000512837 523 ntBASIC17.01■□□□□ 0.31
CAPN2P17655 IGLV3-15-201ENST00000518356 244 ntBASIC17.01■□□□□ 0.31
CAPN2P17655 FXYD2-205ENST00000528014 672 ntAPPRIS P1 TSL 3 BASIC17.01■□□□□ 0.31
CAPN2P17655 ORAOV1-211ENST00000542341 775 ntTSL 2 BASIC17.01■□□□□ 0.31
CAPN2P17655 AL845331.2-201ENST00000561882 1044 ntAPPRIS P1 TSL 5 BASIC17.01■□□□□ 0.31
CAPN2P17655 SNORD3B-2-202ENST00000571722 791 ntBASIC17.01■□□□□ 0.31
CAPN2P17655 CRHR1-208ENST00000577353 1206 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
CAPN2P17655 RANGRF-205ENST00000580434 749 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
CAPN2P17655 WDR7-208ENST00000589935 544 ntTSL 4 BASIC17.01■□□□□ 0.31
CAPN2P17655 MAP3K14-AS1-210ENST00000592422 831 ntTSL 3 BASIC17.01■□□□□ 0.31
CAPN2P17655 CUTA-215ENST00000611509 1199 ntAPPRIS P3 TSL 1 (best) BASIC17.01■□□□□ 0.31
CAPN2P17655 EPHX1-202ENST00000366837 1780 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
CAPN2P17655 USP38-202ENST00000510377 4135 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
CAPN2P17655 ZNF18-201ENST00000322748 2767 ntAPPRIS P3 TSL 2 BASIC17.01■□□□□ 0.31
CAPN2P17655 FAM46C-201ENST00000369448 5751 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
CAPN2P17655 MPL-201ENST00000372470 1908 ntAPPRIS P2 TSL 1 (best) BASIC17.01■□□□□ 0.31
CAPN2P17655 TVP23C-203ENST00000428082 1911 ntAPPRIS ALT1 TSL 1 (best) BASIC17.01■□□□□ 0.31
CAPN2P17655 BET1L-201ENST00000325147 2916 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
CAPN2P17655 MED16-203ENST00000325464 2922 ntAPPRIS P2 TSL 5 BASIC17.01■□□□□ 0.31
CAPN2P17655 COL11A2-201ENST00000341947 6425 ntAPPRIS ALT2 TSL 5 BASIC17.01■□□□□ 0.31
CAPN2P17655 PVR-203ENST00000403059 3078 ntAPPRIS ALT2 TSL 2 BASIC17.01■□□□□ 0.31
CAPN2P17655 GSK3B-201ENST00000264235 7711 ntAPPRIS ALT1 TSL 1 (best) BASIC17.01■□□□□ 0.31
CAPN2P17655 C7orf57-203ENST00000430738 2056 ntTSL 5 BASIC17.01■□□□□ 0.31
CAPN2P17655 HELZ2-202ENST00000427522 7827 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
CAPN2P17655 DDHD2-205ENST00000520272 4532 ntAPPRIS P1 TSL 2 BASIC17.01■□□□□ 0.31
CAPN2P17655 SLC13A5-208ENST00000573648 1723 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
CAPN2P17655 AL356585.2-201ENST00000625078 2396 ntBASIC17.01■□□□□ 0.31
CAPN2P17655 SLC52A3-201ENST00000217254 2654 ntAPPRIS P1 TSL 5 BASIC17.01■□□□□ 0.31
CAPN2P17655 SESN1-202ENST00000356644 2676 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
CAPN2P17655 RRP1B-201ENST00000340648 5090 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
CAPN2P17655 TBRG4-215ENST00000494076 2190 ntAPPRIS P1 TSL 2 BASIC17.01■□□□□ 0.31
CAPN2P17655 LOH12CR2-201ENST00000381800 1540 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
CAPN2P17655 COG8-206ENST00000306875 4247 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
CAPN2P17655 FBXL16-201ENST00000324361 3411 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
CAPN2P17655 FSD1L-206ENST00000481272 1804 ntTSL 2 BASIC17■□□□□ 0.31
CAPN2P17655 CDS2-203ENST00000460006 9298 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
CAPN2P17655 DUSP22-202ENST00000419235 3098 ntAPPRIS P1 TSL 2 BASIC17■□□□□ 0.31
CAPN2P17655 NDRG2-203ENST00000350792 2127 ntAPPRIS ALT1 TSL 1 (best) BASIC17■□□□□ 0.31
CAPN2P17655 SNRNP27-202ENST00000409116 1339 ntTSL 5 BASIC17■□□□□ 0.31
CAPN2P17655 ALG12-201ENST00000330817 5350 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
CAPN2P17655 NKIRAS1-203ENST00000415901 1644 ntAPPRIS ALT1 TSL 5 BASIC17■□□□□ 0.31
CAPN2P17655 CYB5D2-201ENST00000301391 1910 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
CAPN2P17655 AC079447.1-201ENST00000424491 1947 ntAPPRIS P1 TSL 2 BASIC17■□□□□ 0.31
CAPN2P17655 IFRD1-205ENST00000429071 1938 ntTSL 2 BASIC17■□□□□ 0.31
CAPN2P17655 TRIP10-208ENST00000596758 1920 ntTSL 1 (best) BASIC17■□□□□ 0.31
CAPN2P17655 C9orf139-202ENST00000623196 4990 ntTSL 2 BASIC17■□□□□ 0.31
CAPN2P17655 NTRK3-AS1-201ENST00000569588 2663 ntTSL 2 BASIC17■□□□□ 0.31
CAPN2P17655 ZNF354B-201ENST00000322434 2802 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
CAPN2P17655 C1QTNF1-204ENST00000392445 2833 ntAPPRIS P1 TSL 2 BASIC17■□□□□ 0.31
CAPN2P17655 CRACR2A-201ENST00000252322 2186 ntTSL 1 (best) BASIC17■□□□□ 0.31
CAPN2P17655 SRP14-201ENST00000267884 1077 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
CAPN2P17655 ETV2-201ENST00000379023 926 ntAPPRIS ALT2 TSL 1 (best) BASIC17■□□□□ 0.31
CAPN2P17655 GSG1L-201ENST00000380897 1173 ntTSL 1 (best) BASIC17■□□□□ 0.31
CAPN2P17655 LINC01388-201ENST00000416242 416 ntTSL 3 BASIC17■□□□□ 0.31
CAPN2P17655 RPL37A-203ENST00000427280 698 ntTSL 5 BASIC17■□□□□ 0.31
Retrieved 100 of 98,524 protein–RNA pairs in 85.8 ms