Protein–RNA interactions for Protein: P13236

CCL4, C-C motif chemokine 4, humanhuman

Predictions only

Length 92 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCL4P13236 LINC01671-201ENST00000419628 1775 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
CCL4P13236 LRIF1-202ENST00000485275 1796 ntAPPRIS ALT2 TSL 2 BASIC13.73□□□□□ -0.21
CCL4P13236 RAB3IL1-201ENST00000301773 2125 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
CCL4P13236 NDRG2-226ENST00000554104 2146 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
CCL4P13236 EFHC1-227ENST00000637089 2133 ntTSL 5 BASIC13.73□□□□□ -0.21
CCL4P13236 GSPT2-201ENST00000340438 2802 ntAPPRIS P1 BASIC13.73□□□□□ -0.21
CCL4P13236 PDE1C-202ENST00000396182 2420 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
CCL4P13236 ANXA8L1-202ENST00000611655 1398 ntTSL 2 BASIC13.73□□□□□ -0.21
CCL4P13236 DNAAF5-201ENST00000297440 3410 ntAPPRIS P2 TSL 1 (best) BASIC13.73□□□□□ -0.21
CCL4P13236 AC018529.2-202ENST00000611482 3087 ntBASIC13.73□□□□□ -0.21
CCL4P13236 SHISA9-201ENST00000423335 4043 ntAPPRIS ALT2 TSL 1 (best) BASIC13.73□□□□□ -0.21
CCL4P13236 C11orf16-202ENST00000525780 1685 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
CCL4P13236 LINC01864-201ENST00000587218 1661 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
CCL4P13236 GHDC-201ENST00000301671 2650 ntAPPRIS P1 TSL 2 BASIC13.73□□□□□ -0.21
CCL4P13236 TMEM177-202ENST00000401466 1346 ntAPPRIS P1 TSL 2 BASIC13.73□□□□□ -0.21
CCL4P13236 GNE-202ENST00000396594 5298 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
CCL4P13236 NAA60-203ENST00000414063 2619 ntAPPRIS P1 TSL 2 BASIC13.73□□□□□ -0.21
CCL4P13236 SIPA1-203ENST00000527525 3235 ntTSL 2 BASIC13.73□□□□□ -0.21
CCL4P13236 CDH1-202ENST00000422392 2567 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
CCL4P13236 TFAP2C-201ENST00000201031 2866 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
CCL4P13236 ELMOD1-201ENST00000265840 2852 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
CCL4P13236 FERD3L-201ENST00000275461 640 ntAPPRIS P1 BASIC13.73□□□□□ -0.21
CCL4P13236 AL627389.1-201ENST00000413508 1182 ntBASIC13.73□□□□□ -0.21
CCL4P13236 AC145207.1-201ENST00000415556 691 ntTSL 4 BASIC13.73□□□□□ -0.21
CCL4P13236 AC073869.2-201ENST00000417338 1026 ntBASIC13.73□□□□□ -0.21
CCL4P13236 AC005392.1-201ENST00000419624 500 ntTSL 5 BASIC13.73□□□□□ -0.21
CCL4P13236 AC092580.1-201ENST00000433998 658 ntBASIC13.73□□□□□ -0.21
CCL4P13236 BX276092.5-201ENST00000439926 886 ntTSL 5 BASIC13.73□□□□□ -0.21
CCL4P13236 AC004869.1-201ENST00000440935 540 ntTSL 4 BASIC13.73□□□□□ -0.21
CCL4P13236 PIN4P1-201ENST00000451079 396 ntBASIC13.73□□□□□ -0.21
CCL4P13236 CCDC18-AS1-219ENST00000451302 1212 ntTSL 3 BASIC13.73□□□□□ -0.21
CCL4P13236 SIAH2-AS1-201ENST00000461943 441 ntTSL 4 BASIC13.73□□□□□ -0.21
CCL4P13236 RPP40-203ENST00000464646 1042 ntTSL 5 BASIC13.73□□□□□ -0.21
CCL4P13236 ALG1L13P-202ENST00000519320 584 ntBASIC13.73□□□□□ -0.21
CCL4P13236 AP003398.1-201ENST00000531124 318 ntBASIC13.73□□□□□ -0.21
CCL4P13236 SMIM6-201ENST00000556126 866 ntAPPRIS P1 TSL 2 BASIC13.73□□□□□ -0.21
CCL4P13236 AC027237.1-201ENST00000560942 655 ntBASIC13.73□□□□□ -0.21
CCL4P13236 AC006435.2-201ENST00000574290 846 ntTSL 5 BASIC13.73□□□□□ -0.21
CCL4P13236 LINC01224-201ENST00000593573 798 ntTSL 4 BASIC13.73□□□□□ -0.21
CCL4P13236 BBS5-201ENST00000295240 3475 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
CCL4P13236 RASAL1-207ENST00000548055 2502 ntAPPRIS ALT2 TSL 1 (best) BASIC13.73□□□□□ -0.21
CCL4P13236 DGAT1-206ENST00000528718 3711 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
CCL4P13236 NDOR1-202ENST00000371521 2497 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
CCL4P13236 GPD2-208ENST00000438166 2457 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
CCL4P13236 SEC24D-202ENST00000419654 2786 ntTSL 5 BASIC13.73□□□□□ -0.21
CCL4P13236 CHCHD7-202ENST00000355315 1535 ntTSL 2 BASIC13.73□□□□□ -0.21
CCL4P13236 ARMCX1-201ENST00000372829 2141 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
CCL4P13236 GDI2-203ENST00000380191 2412 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
CCL4P13236 LRP11-201ENST00000239367 3260 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
CCL4P13236 ANKMY1-210ENST00000406958 2396 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
CCL4P13236 TLDC2-201ENST00000217320 2083 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
CCL4P13236 SIK1-201ENST00000270162 4712 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
CCL4P13236 CU639417.2-201ENST00000613488 4705 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
CCL4P13236 SLC25A19-205ENST00000442286 1496 ntAPPRIS P1 TSL 5 BASIC13.73□□□□□ -0.21
CCL4P13236 AC109460.1-201ENST00000567209 1478 ntTSL 3 BASIC13.73□□□□□ -0.21
CCL4P13236 HELZ2-202ENST00000427522 7827 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
CCL4P13236 FURIN-207ENST00000618099 4345 ntAPPRIS P1 TSL 5 BASIC13.73□□□□□ -0.21
CCL4P13236 PNMA1-201ENST00000316836 2590 ntAPPRIS P1 BASIC13.73□□□□□ -0.21
CCL4P13236 AL513327.1-206ENST00000587696 1432 ntTSL 5 BASIC13.73□□□□□ -0.21
CCL4P13236 FUS-201ENST00000254108 5119 ntAPPRIS P3 TSL 1 (best) BASIC13.73□□□□□ -0.21
CCL4P13236 PDE4A-203ENST00000380702 4781 ntAPPRIS P4 TSL 1 (best) BASIC13.72□□□□□ -0.21
CCL4P13236 PORCN-204ENST00000361988 1672 ntAPPRIS ALT1 TSL 5 BASIC13.72□□□□□ -0.21
CCL4P13236 CYP11A1-201ENST00000268053 1934 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
CCL4P13236 DUSP18-201ENST00000334679 2479 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
CCL4P13236 DUS2-201ENST00000358896 1933 ntAPPRIS P1 TSL 2 BASIC13.72□□□□□ -0.21
CCL4P13236 AC082651.3-201ENST00000474667 1947 ntTSL 2 BASIC13.72□□□□□ -0.21
CCL4P13236 EFHC1-212ENST00000635984 3293 ntTSL 5 BASIC13.72□□□□□ -0.21
CCL4P13236 AC006486.2-201ENST00000624246 2199 ntBASIC13.72□□□□□ -0.21
CCL4P13236 AL953897.1-201ENST00000376620 1868 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
CCL4P13236 PCDHB13-201ENST00000341948 5061 ntAPPRIS P1 BASIC13.72□□□□□ -0.21
CCL4P13236 ADRA2A-201ENST00000280155 3745 ntAPPRIS P1 BASIC13.72□□□□□ -0.21
CCL4P13236 SNX2-201ENST00000379516 2128 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
CCL4P13236 TXNDC5-204ENST00000473453 1301 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
CCL4P13236 C3orf62-201ENST00000343010 4235 ntAPPRIS P2 TSL 1 (best) BASIC13.72□□□□□ -0.21
CCL4P13236 FUCA2-201ENST00000002165 2356 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
CCL4P13236 FNDC1-201ENST00000297267 6552 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
CCL4P13236 CREB3L3-201ENST00000078445 2618 ntAPPRIS P3 TSL 1 (best) BASIC13.72□□□□□ -0.21
CCL4P13236 C4A-243ENST00000428956 5460 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
CCL4P13236 C4B-202ENST00000435363 5460 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
CCL4P13236 SURF6-201ENST00000372022 4447 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
CCL4P13236 PPP4R4-201ENST00000304338 3868 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
CCL4P13236 KIAA1211-206ENST00000541073 4117 ntAPPRIS ALT2 TSL 1 (best) BASIC13.72□□□□□ -0.21
CCL4P13236 PCDHGB2-202ENST00000622527 2588 ntAPPRIS P1 BASIC13.72□□□□□ -0.21
CCL4P13236 MEX3A-202ENST00000532414 6124 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
CCL4P13236 NPFF-201ENST00000267017 592 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
CCL4P13236 RAB25-201ENST00000361084 1110 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
CCL4P13236 ZFAND2B-205ENST00000409319 771 ntTSL 2 BASIC13.72□□□□□ -0.21
CCL4P13236 NSUN5P1-203ENST00000422386 972 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
CCL4P13236 AC105254.1-201ENST00000507782 621 ntTSL 4 BASIC13.72□□□□□ -0.21
CCL4P13236 TMCO5B-205ENST00000530020 894 ntBASIC13.72□□□□□ -0.21
CCL4P13236 RTN4RL2-203ENST00000533205 637 ntTSL 3 BASIC13.72□□□□□ -0.21
CCL4P13236 RPL18A-204ENST00000599898 491 ntTSL 2 BASIC13.72□□□□□ -0.21
CCL4P13236 AL591471.1-201ENST00000621855 229 ntBASIC13.72□□□□□ -0.21
CCL4P13236 CSF3-201ENST00000225474 1509 ntAPPRIS P3 TSL 1 (best) BASIC13.72□□□□□ -0.21
CCL4P13236 PIGT-246ENST00000639499 2021 ntTSL 5 BASIC13.72□□□□□ -0.21
CCL4P13236 ZNF174-201ENST00000268655 2260 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
CCL4P13236 CCT4-201ENST00000394440 2520 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
CCL4P13236 MTFMT-201ENST00000220058 2734 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
CCL4P13236 CENPT-202ENST00000440851 2200 ntAPPRIS P2 TSL 5 BASIC13.72□□□□□ -0.21
CCL4P13236 MAGED2-201ENST00000218439 1958 ntAPPRIS P2 TSL 5 BASIC13.72□□□□□ -0.21
Retrieved 100 of 98,524 protein–RNA pairs in 35.7 ms