Protein–RNA interactions for Protein: P12645

BMP3, Bone morphogenetic protein 3, humanhuman

Predictions only

Length 472 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BMP3P12645 LZTS1-201ENST00000265801 5459 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
BMP3P12645 TRIM46-203ENST00000368383 2666 ntTSL 5 BASIC16.83■□□□□ 0.28
BMP3P12645 ANKS6-202ENST00000375019 2586 ntTSL 5 BASIC16.83■□□□□ 0.28
BMP3P12645 NR4A1-204ENST00000394825 2528 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
BMP3P12645 TCF25-202ENST00000263347 2377 ntTSL 5 BASIC16.82■□□□□ 0.28
BMP3P12645 SLC35C2-204ENST00000372230 2246 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
BMP3P12645 EEF1A1-202ENST00000316292 4441 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
BMP3P12645 CTSD-201ENST00000236671 2123 ntAPPRIS P2 TSL 1 (best) BASIC16.82■□□□□ 0.28
BMP3P12645 LINC02212-201ENST00000515243 2130 ntTSL 2 BASIC16.82■□□□□ 0.28
BMP3P12645 P2RX5-207ENST00000551178 1863 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
BMP3P12645 AC215219.1-201ENST00000400706 1817 ntBASIC16.82■□□□□ 0.28
BMP3P12645 NR1H3-211ENST00000441012 1637 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
BMP3P12645 BSDC1-205ENST00000446293 1505 ntTSL 2 BASIC16.82■□□□□ 0.28
BMP3P12645 IL6ST-209ENST00000502326 3007 ntAPPRIS P1 TSL 5 BASIC16.82■□□□□ 0.28
BMP3P12645 FOSB-213ENST00000615753 1468 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
BMP3P12645 BDP1-202ENST00000380675 2861 ntAPPRIS ALT2 TSL 5 BASIC16.82■□□□□ 0.28
BMP3P12645 LINC00905-203ENST00000588838 1414 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
BMP3P12645 PKN2-201ENST00000316005 2632 ntTSL 5 BASIC16.82■□□□□ 0.28
BMP3P12645 AC103702.1-201ENST00000548801 2630 ntBASIC16.82■□□□□ 0.28
BMP3P12645 MYMK-201ENST00000339996 818 ntAPPRIS P1 TSL 2 BASIC16.82■□□□□ 0.28
BMP3P12645 HDDC2-202ENST00000398153 918 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
BMP3P12645 HSPB7-203ENST00000406363 648 ntAPPRIS ALT1 TSL 1 (best) BASIC16.82■□□□□ 0.28
BMP3P12645 FTLP1-201ENST00000449155 526 ntBASIC16.82■□□□□ 0.28
BMP3P12645 SNHG14-206ENST00000450809 677 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
BMP3P12645 AC135983.1-201ENST00000562108 1097 ntTSL 2 BASIC16.82■□□□□ 0.28
BMP3P12645 PHBP15-201ENST00000574228 665 ntBASIC16.82■□□□□ 0.28
BMP3P12645 NAT9-220ENST00000582870 896 ntTSL 5 BASIC16.82■□□□□ 0.28
BMP3P12645 C19orf25-205ENST00000588427 853 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
BMP3P12645 AC008763.1-201ENST00000601797 843 ntTSL 3 BASIC16.82■□□□□ 0.28
BMP3P12645 AC007718.1-201ENST00000621078 280 ntBASIC16.82■□□□□ 0.28
BMP3P12645 SLC39A1-201ENST00000310483 2427 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
BMP3P12645 SLC41A3-204ENST00000383598 2330 ntAPPRIS P3 TSL 2 BASIC16.82■□□□□ 0.28
BMP3P12645 DEF8-210ENST00000563594 4450 ntAPPRIS P4 TSL 1 (best) BASIC16.82■□□□□ 0.28
BMP3P12645 CCND3-201ENST00000372987 2233 ntTSL 2 BASIC16.82■□□□□ 0.28
BMP3P12645 MBOAT2-201ENST00000305997 7751 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
BMP3P12645 TRAPPC11-202ENST00000357207 4435 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
BMP3P12645 CEP295NL-201ENST00000322630 2090 ntTSL 2 BASIC16.82■□□□□ 0.28
BMP3P12645 C7orf72-201ENST00000297001 2028 ntAPPRIS P1 TSL 5 BASIC16.82■□□□□ 0.28
BMP3P12645 PRKX-201ENST00000262848 6031 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
BMP3P12645 SOCS2-212ENST00000622746 2881 ntAPPRIS P1 TSL 3 BASIC16.82■□□□□ 0.28
BMP3P12645 UBAP1-201ENST00000297661 2735 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
BMP3P12645 IFT52-201ENST00000373030 1757 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
BMP3P12645 AP001627.1-201ENST00000437426 1754 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
BMP3P12645 ZNF19-208ENST00000565637 2612 ntTSL 2 BASIC16.82■□□□□ 0.28
BMP3P12645 PARP10-201ENST00000313028 3497 ntAPPRIS P3 TSL 1 (best) BASIC16.82■□□□□ 0.28
BMP3P12645 PRDM1-203ENST00000369096 5164 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
BMP3P12645 AC003986.2-201ENST00000419944 1711 ntTSL 3 BASIC16.82■□□□□ 0.28
BMP3P12645 ACTG1P17-202ENST00000560958 1662 ntTSL 2 BASIC16.81■□□□□ 0.28
BMP3P12645 AL354813.1-201ENST00000526566 2437 ntTSL 5 BASIC16.81■□□□□ 0.28
BMP3P12645 ITGBL1-207ENST00000622834 2369 ntTSL 5 BASIC16.81■□□□□ 0.28
BMP3P12645 RCC1-201ENST00000373831 1577 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
BMP3P12645 AP002353.1-201ENST00000528257 1599 ntBASIC16.81■□□□□ 0.28
BMP3P12645 ARHGAP4-202ENST00000370016 3095 ntAPPRIS ALT2 TSL 5 BASIC16.81■□□□□ 0.28
BMP3P12645 SERPINF1-201ENST00000254722 1548 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
BMP3P12645 CPEB1-211ENST00000615198 2112 ntAPPRIS P2 TSL 1 (best) BASIC16.81■□□□□ 0.28
BMP3P12645 CCNH-201ENST00000256897 1378 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
BMP3P12645 PPIL3-201ENST00000286175 1370 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
BMP3P12645 CCDC68-204ENST00000591504 4132 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
BMP3P12645 ZXDC-202ENST00000389709 3405 ntAPPRIS P4 TSL 1 (best) BASIC16.81■□□□□ 0.28
BMP3P12645 ITSN1-204ENST00000381285 6107 ntTSL 5 BASIC16.81■□□□□ 0.28
BMP3P12645 TOMM22-201ENST00000216034 2040 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
BMP3P12645 EIF2S2-201ENST00000374980 2656 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
BMP3P12645 SLC35A3-221ENST00000640600 3341 ntTSL 5 BASIC16.81■□□□□ 0.28
BMP3P12645 ANKRD26-201ENST00000376087 6591 ntAPPRIS P2 TSL 5 BASIC16.81■□□□□ 0.28
BMP3P12645 NPFF-201ENST00000267017 592 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
BMP3P12645 PBDC1-201ENST00000373357 977 ntTSL 2 BASIC16.81■□□□□ 0.28
BMP3P12645 CALCA-203ENST00000396372 581 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
BMP3P12645 BANF1P3-201ENST00000412556 261 ntBASIC16.81■□□□□ 0.28
BMP3P12645 LINC00686-201ENST00000435412 332 ntTSL 3 BASIC16.81■□□□□ 0.28
BMP3P12645 LINC00322-201ENST00000450205 699 ntTSL 3 BASIC16.81■□□□□ 0.28
BMP3P12645 TMEM198B-204ENST00000484016 896 ntBASIC16.81■□□□□ 0.28
BMP3P12645 LINC02380-201ENST00000510956 1038 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
BMP3P12645 WSPAR-201ENST00000513561 683 ntTSL 3 BASIC16.81■□□□□ 0.28
BMP3P12645 AC105105.3-201ENST00000585470 646 ntTSL 5 BASIC16.81■□□□□ 0.28
BMP3P12645 IMPA2-207ENST00000588927 787 ntTSL 5 BASIC16.81■□□□□ 0.28
BMP3P12645 AC008743.1-201ENST00000596350 813 ntTSL 4 BASIC16.81■□□□□ 0.28
BMP3P12645 AL022334.2-201ENST00000610000 484 ntBASIC16.81■□□□□ 0.28
BMP3P12645 AL591471.1-201ENST00000621855 229 ntBASIC16.81■□□□□ 0.28
BMP3P12645 ARHGEF28-202ENST00000296799 4424 ntAPPRIS ALT2 TSL 2 BASIC16.81■□□□□ 0.28
BMP3P12645 CBX3-202ENST00000396386 1857 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
BMP3P12645 ATG5-201ENST00000343245 3092 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
BMP3P12645 C1orf228-218ENST00000458657 1818 ntAPPRIS P2 TSL 5 BASIC16.81■□□□□ 0.28
BMP3P12645 CD3EAP-202ENST00000589804 1830 ntAPPRIS ALT2 TSL 1 (best) BASIC16.81■□□□□ 0.28
BMP3P12645 PITPNM2-208ENST00000542749 6660 ntAPPRIS P3 TSL 1 (best) BASIC16.81■□□□□ 0.28
BMP3P12645 LGALS8-203ENST00000341872 2437 ntAPPRIS ALT2 TSL 1 (best) BASIC16.81■□□□□ 0.28
BMP3P12645 STXBP6-201ENST00000323944 4132 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
BMP3P12645 PAX7-202ENST00000400661 1700 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
BMP3P12645 HIST1H2AG-201ENST00000359193 2250 ntAPPRIS P1 BASIC16.81■□□□□ 0.28
BMP3P12645 UGDH-201ENST00000316423 3216 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
BMP3P12645 PBX1-219ENST00000560641 3225 ntTSL 5 BASIC16.81■□□□□ 0.28
BMP3P12645 TPM3-208ENST00000341485 2063 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
BMP3P12645 MAGI1-216ENST00000497477 3555 ntTSL 5 BASIC16.81■□□□□ 0.28
BMP3P12645 LINC00339-208ENST00000634934 1518 ntTSL 5 BASIC16.8■□□□□ 0.28
BMP3P12645 MRI1-202ENST00000319545 3027 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
BMP3P12645 PTPRU-201ENST00000345512 4470 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
BMP3P12645 ZNF324B-201ENST00000336614 2996 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
BMP3P12645 BLMH-201ENST00000261714 2365 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
BMP3P12645 BTBD8-201ENST00000342818 1412 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
BMP3P12645 VWCE-205ENST00000535710 1437 ntTSL 2 BASIC16.8■□□□□ 0.28
BMP3P12645 MKNK2-201ENST00000250896 3774 ntAPPRIS P4 TSL 5 BASIC16.8■□□□□ 0.28
Retrieved 100 of 98,524 protein–RNA pairs in 75.8 ms