Protein–RNA interactions for Protein: P12107

COL11A1, Collagen alpha-1(XI) chain, humanhuman

Predicted RBP Predictions only

Length 1,806 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL11A1P12107 AC145285.5-201ENST00000562217 361 ntBASIC16.24■□□□□ 0.19
COL11A1P12107 AC134312.2-201ENST00000563521 608 ntTSL 2 BASIC16.24■□□□□ 0.19
COL11A1P12107 RN7SL725P-201ENST00000606439 259 ntBASIC16.24■□□□□ 0.19
COL11A1P12107 BIRC5-203ENST00000374948 2446 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
COL11A1P12107 CLIP2-201ENST00000223398 5563 ntAPPRIS P1 TSL 5 BASIC16.24■□□□□ 0.19
COL11A1P12107 ATP2A2-201ENST00000308664 4453 ntAPPRIS ALT1 TSL 1 (best) BASIC16.24■□□□□ 0.19
COL11A1P12107 VWA1-203ENST00000476993 4511 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
COL11A1P12107 SMARCA4-215ENST00000590574 5282 ntAPPRIS ALT1 TSL 5 BASIC16.24■□□□□ 0.19
COL11A1P12107 MIDN-201ENST00000300952 3790 ntAPPRIS P2 TSL 5 BASIC16.24■□□□□ 0.19
COL11A1P12107 AC068760.1-201ENST00000493579 1953 ntBASIC16.24■□□□□ 0.19
COL11A1P12107 CIART-201ENST00000290363 1746 ntAPPRIS P3 TSL 1 (best) BASIC16.24■□□□□ 0.19
COL11A1P12107 AC010255.3-203ENST00000509403 1727 ntAPPRIS P1 TSL 2 BASIC16.24■□□□□ 0.19
COL11A1P12107 KRT8P18-201ENST00000413425 1445 ntBASIC16.24■□□□□ 0.19
COL11A1P12107 BFAR-203ENST00000562442 1414 ntTSL 2 BASIC16.24■□□□□ 0.19
COL11A1P12107 RBBP4-204ENST00000414241 1788 ntAPPRIS ALT1 TSL 1 (best) BASIC16.24■□□□□ 0.19
COL11A1P12107 UBOX5-AS1-201ENST00000446537 1792 ntTSL 2 BASIC16.24■□□□□ 0.19
COL11A1P12107 COL4A3BP-204ENST00000405807 2843 ntAPPRIS P1 TSL 5 BASIC16.24■□□□□ 0.19
COL11A1P12107 FRRS1L-201ENST00000561981 8197 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
COL11A1P12107 ATP6V0A2-201ENST00000330342 6542 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
COL11A1P12107 AC008125.1-201ENST00000548488 1538 ntTSL 5 BASIC16.24■□□□□ 0.19
COL11A1P12107 FAM96A-203ENST00000557835 1536 ntTSL 2 BASIC16.24■□□□□ 0.19
COL11A1P12107 MACROD2-201ENST00000217246 4994 ntAPPRIS P1 TSL 2 BASIC16.24■□□□□ 0.19
COL11A1P12107 BLOC1S6-212ENST00000566753 1996 ntTSL 2 BASIC16.24■□□□□ 0.19
COL11A1P12107 FMR1-215ENST00000616382 1648 ntTSL 5 BASIC16.24■□□□□ 0.19
COL11A1P12107 MBD3L3-201ENST00000333843 775 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
COL11A1P12107 HFE-203ENST00000336625 804 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
COL11A1P12107 TPM3-211ENST00000368531 1115 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
COL11A1P12107 CHCHD2-201ENST00000395422 901 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
COL11A1P12107 GULP1-204ENST00000409637 1242 ntTSL 2 BASIC16.24■□□□□ 0.19
COL11A1P12107 OR52M2P-201ENST00000414298 959 ntBASIC16.24■□□□□ 0.19
COL11A1P12107 AL355537.2-201ENST00000453367 375 ntTSL 2 BASIC16.24■□□□□ 0.19
COL11A1P12107 LINC00887-204ENST00000456816 796 ntTSL 3 BASIC16.24■□□□□ 0.19
COL11A1P12107 FRMD4A-204ENST00000475141 1233 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
COL11A1P12107 AL157792.1-201ENST00000488281 530 ntBASIC16.24■□□□□ 0.19
COL11A1P12107 USB1-205ENST00000561743 1135 ntTSL 3 BASIC16.24■□□□□ 0.19
COL11A1P12107 STAT5A-208ENST00000587646 1022 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
COL11A1P12107 OCEL1-206ENST00000597836 1044 ntAPPRIS ALT2 TSL 2 BASIC16.24■□□□□ 0.19
COL11A1P12107 FAM86C1-201ENST00000346333 2010 ntAPPRIS P3 TSL 1 (best) BASIC16.24■□□□□ 0.19
COL11A1P12107 SCARB2-223ENST00000640640 4608 ntTSL 5 BASIC16.24■□□□□ 0.19
COL11A1P12107 AMMECR1-201ENST00000262844 5504 ntAPPRIS P3 TSL 1 (best) BASIC16.24■□□□□ 0.19
COL11A1P12107 C12orf73-201ENST00000378090 1738 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
COL11A1P12107 SLC6A2-205ENST00000566163 1759 ntTSL 5 BASIC16.23■□□□□ 0.19
COL11A1P12107 MMP15-201ENST00000219271 4250 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
COL11A1P12107 BICDL1-201ENST00000397558 3055 ntAPPRIS P1 TSL 5 BASIC16.23■□□□□ 0.19
COL11A1P12107 POU3F2-201ENST00000328345 4879 ntAPPRIS P1 BASIC16.23■□□□□ 0.19
COL11A1P12107 BRCC3-201ENST00000330045 2496 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
COL11A1P12107 STK39-201ENST00000355999 3820 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
COL11A1P12107 GPAT2-204ENST00000453542 2466 ntTSL 2 BASIC16.23■□□□□ 0.19
COL11A1P12107 CSAD-202ENST00000379843 2086 ntTSL 5 BASIC16.23■□□□□ 0.19
COL11A1P12107 BBS5-201ENST00000295240 3475 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
COL11A1P12107 MFRP-201ENST00000360167 1663 ntTSL 2 BASIC16.23■□□□□ 0.19
COL11A1P12107 KCNG4-202ENST00000568181 2199 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
COL11A1P12107 MIR3936HG-204ENST00000621103 1793 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
COL11A1P12107 CST1-201ENST00000304749 760 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
COL11A1P12107 NPPA-202ENST00000376480 855 ntAPPRIS P2 TSL 1 (best) BASIC16.23■□□□□ 0.19
COL11A1P12107 AC103592.1-201ENST00000394513 664 ntBASIC16.23■□□□□ 0.19
COL11A1P12107 PUS10-202ENST00000398658 1227 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
COL11A1P12107 TRBC2-201ENST00000466254 758 ntAPPRIS P1 BASIC16.23■□□□□ 0.19
COL11A1P12107 AADACL2-AS1-202ENST00000483843 628 ntTSL 5 BASIC16.23■□□□□ 0.19
COL11A1P12107 AC084752.1-201ENST00000509766 622 ntBASIC16.23■□□□□ 0.19
COL11A1P12107 AL022344.2-201ENST00000568976 968 ntBASIC16.23■□□□□ 0.19
COL11A1P12107 CEP95-212ENST00000581056 903 ntAPPRIS ALT2 TSL 2 BASIC16.23■□□□□ 0.19
COL11A1P12107 NPPA-203ENST00000610706 849 ntAPPRIS ALT1 TSL 5 BASIC16.23■□□□□ 0.19
COL11A1P12107 LRCH1-202ENST00000389797 3314 ntAPPRIS ALT2 TSL 1 (best) BASIC16.23■□□□□ 0.19
COL11A1P12107 MCTP1-218ENST00000515393 5396 ntAPPRIS P3 TSL 1 (best) BASIC16.23■□□□□ 0.19
COL11A1P12107 BIN3-205ENST00000519513 1431 ntTSL 2 BASIC16.23■□□□□ 0.19
COL11A1P12107 MYCBPAP-201ENST00000323776 3186 ntAPPRIS P2 TSL 1 (best) BASIC16.23■□□□□ 0.19
COL11A1P12107 PPARG-205ENST00000397010 2017 ntAPPRIS ALT1 TSL 1 (best) BASIC16.23■□□□□ 0.19
COL11A1P12107 AL022313.4-201ENST00000562756 2046 ntBASIC16.23■□□□□ 0.19
COL11A1P12107 EIF2S2-201ENST00000374980 2656 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
COL11A1P12107 PRNP-201ENST00000379440 2657 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
COL11A1P12107 RAD23A-209ENST00000592268 1526 ntTSL 5 BASIC16.23■□□□□ 0.19
COL11A1P12107 ZMIZ1-205ENST00000611351 2196 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
COL11A1P12107 AL031280.1-201ENST00000436991 2224 ntTSL 2 BASIC16.23■□□□□ 0.19
COL11A1P12107 IL3RA-201ENST00000331035 1706 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
COL11A1P12107 MOV10L1-202ENST00000354853 1701 ntTSL 2 BASIC16.22■□□□□ 0.19
COL11A1P12107 SELENOV-202ENST00000423711 1701 ntTSL 5 BASIC16.22■□□□□ 0.19
COL11A1P12107 HMOX2-204ENST00000414777 1752 ntAPPRIS P1 TSL 5 BASIC16.22■□□□□ 0.19
COL11A1P12107 GARS-201ENST00000389266 2634 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
COL11A1P12107 GCK-204ENST00000403799 2729 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
COL11A1P12107 POLR2L-201ENST00000322028 892 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
COL11A1P12107 SPATA8-201ENST00000328504 1083 ntAPPRIS P2 TSL 1 (best) BASIC16.22■□□□□ 0.19
COL11A1P12107 BAX-205ENST00000391871 687 ntTSL 5 BASIC16.22■□□□□ 0.19
COL11A1P12107 DMKN-229ENST00000467637 827 ntAPPRIS ALT2 TSL 5 BASIC16.22■□□□□ 0.19
COL11A1P12107 TMEM126A-203ENST00000528105 656 ntTSL 2 BASIC16.22■□□□□ 0.19
COL11A1P12107 C11orf97-201ENST00000542198 701 ntAPPRIS P1 TSL 5 BASIC16.22■□□□□ 0.19
COL11A1P12107 VENTXP3-201ENST00000546480 773 ntBASIC16.22■□□□□ 0.19
COL11A1P12107 AL512310.5-201ENST00000551999 515 ntBASIC16.22■□□□□ 0.19
COL11A1P12107 TMEM98-205ENST00000578289 806 ntTSL 3 BASIC16.22■□□□□ 0.19
COL11A1P12107 AP005264.5-201ENST00000590066 467 ntBASIC16.22■□□□□ 0.19
COL11A1P12107 LINC00244-201ENST00000625073 613 ntBASIC16.22■□□□□ 0.19
COL11A1P12107 RECQL4-210ENST00000621189 3896 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
COL11A1P12107 FAM129B-201ENST00000373312 3957 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
COL11A1P12107 CTBP2P8-201ENST00000422584 1330 ntBASIC16.22■□□□□ 0.19
COL11A1P12107 TUBB8P4-201ENST00000511806 1324 ntBASIC16.22■□□□□ 0.19
COL11A1P12107 HYAL1-209ENST00000618175 2225 ntAPPRIS P1 TSL 5 BASIC16.22■□□□□ 0.19
COL11A1P12107 FTX-216ENST00000638985 1367 ntTSL 5 BASIC16.22■□□□□ 0.19
COL11A1P12107 QKI-203ENST00000361752 9463 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
COL11A1P12107 PCGF2-203ENST00000616129 1534 ntTSL 5 BASIC16.22■□□□□ 0.19
COL11A1P12107 TNRC18P2-201ENST00000417666 2714 ntBASIC16.22■□□□□ 0.19
Retrieved 100 of 98,524 protein–RNA pairs in 38.5 ms