Protein–RNA interactions for Protein: P11230

CHRNB1, Acetylcholine receptor subunit beta, humanhuman

Predictions only

Length 501 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNB1P11230 CGGBP1-201ENST00000309534 4495 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
CHRNB1P11230 MANEAL-201ENST00000329006 1930 ntTSL 2 BASIC14.87□□□□□ -0.03
CHRNB1P11230 POLR1D-212ENST00000630983 1931 ntTSL 5 BASIC14.87□□□□□ -0.03
CHRNB1P11230 ROBO1-209ENST00000495273 5600 ntAPPRIS P3 TSL 1 (best) BASIC14.87□□□□□ -0.03
CHRNB1P11230 LINC01305-201ENST00000420866 3123 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
CHRNB1P11230 MAX-204ENST00000358402 1973 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
CHRNB1P11230 TBXAS1-208ENST00000448866 1963 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
CHRNB1P11230 TRA2B-205ENST00000453386 2952 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
CHRNB1P11230 RAMP3-201ENST00000242249 1323 ntAPPRIS P2 TSL 1 (best) BASIC14.87□□□□□ -0.03
CHRNB1P11230 TEX264-201ENST00000341333 1340 ntAPPRIS P3 TSL 1 (best) BASIC14.87□□□□□ -0.03
CHRNB1P11230 SERHL-201ENST00000359906 1346 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
CHRNB1P11230 PCBP1-AS1-214ENST00000419542 1309 ntTSL 5 BASIC14.87□□□□□ -0.03
CHRNB1P11230 AC005726.3-202ENST00000577814 1316 ntTSL 3 BASIC14.87□□□□□ -0.03
CHRNB1P11230 AC006063.2-201ENST00000640161 1696 ntTSL 5 BASIC14.87□□□□□ -0.03
CHRNB1P11230 HLA-DQB2-231ENST00000435145 2026 ntBASIC14.87□□□□□ -0.03
CHRNB1P11230 DNAJC10-210ENST00000616986 5783 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
CHRNB1P11230 SPCS2-201ENST00000263672 2708 ntAPPRIS P2 TSL 1 (best) BASIC14.86□□□□□ -0.03
CHRNB1P11230 SULT1C4-201ENST00000272452 1860 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
CHRNB1P11230 GPAT2-202ENST00000434632 3061 ntAPPRIS P1 TSL 5 BASIC14.86□□□□□ -0.03
CHRNB1P11230 POU5F1-204ENST00000471529 1723 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
CHRNB1P11230 AC004834.1-201ENST00000640784 2412 ntTSL 3 BASIC14.86□□□□□ -0.03
CHRNB1P11230 SGK3-211ENST00000522398 3106 ntAPPRIS P1 TSL 5 BASIC14.86□□□□□ -0.03
CHRNB1P11230 RNF150-201ENST00000306799 4535 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
CHRNB1P11230 TP53I11-208ENST00000525680 2647 ntAPPRIS P1 TSL 2 BASIC14.86□□□□□ -0.03
CHRNB1P11230 SLC11A2-204ENST00000541174 2470 ntAPPRIS P3 TSL 1 (best) BASIC14.86□□□□□ -0.03
CHRNB1P11230 DDX55-201ENST00000238146 2654 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
CHRNB1P11230 NFATC1-207ENST00000545796 3558 ntTSL 2 BASIC14.86□□□□□ -0.03
CHRNB1P11230 NAXD-202ENST00000424185 2311 ntTSL 2 BASIC14.86□□□□□ -0.03
CHRNB1P11230 CAMK2B-206ENST00000353625 1624 ntAPPRIS ALT1 TSL 1 (best) BASIC14.86□□□□□ -0.03
CHRNB1P11230 KRTAP19-5-201ENST00000334151 461 ntAPPRIS P1 BASIC14.86□□□□□ -0.03
CHRNB1P11230 LYPLA2P1-203ENST00000447689 696 ntBASIC14.86□□□□□ -0.03
CHRNB1P11230 AL157792.1-201ENST00000488281 530 ntBASIC14.86□□□□□ -0.03
CHRNB1P11230 MRPL22P1-201ENST00000505398 616 ntBASIC14.86□□□□□ -0.03
CHRNB1P11230 LINC01598-205ENST00000508763 719 ntTSL 5 BASIC14.86□□□□□ -0.03
CHRNB1P11230 PCMTD1-207ENST00000522514 1287 ntAPPRIS P1 TSL 2 BASIC14.86□□□□□ -0.03
CHRNB1P11230 VDAC3-211ENST00000522572 799 ntTSL 5 BASIC14.86□□□□□ -0.03
CHRNB1P11230 FXYD2-205ENST00000528014 672 ntAPPRIS P1 TSL 3 BASIC14.86□□□□□ -0.03
CHRNB1P11230 LINC01481-204ENST00000550216 494 ntTSL 2 BASIC14.86□□□□□ -0.03
CHRNB1P11230 AL356756.1-201ENST00000550941 551 ntTSL 3 BASIC14.86□□□□□ -0.03
CHRNB1P11230 SMIM6-201ENST00000556126 866 ntAPPRIS P1 TSL 2 BASIC14.86□□□□□ -0.03
CHRNB1P11230 CRTC3-AS1-202ENST00000559531 657 ntTSL 3 BASIC14.86□□□□□ -0.03
CHRNB1P11230 AP001184.1-201ENST00000637936 376 ntBASIC14.86□□□□□ -0.03
CHRNB1P11230 MVK-217ENST00000639206 367 ntTSL 5 BASIC14.86□□□□□ -0.03
CHRNB1P11230 OR4C6-202ENST00000641251 1058 ntAPPRIS P1 BASIC14.86□□□□□ -0.03
CHRNB1P11230 CYP2U1-201ENST00000332884 4944 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
CHRNB1P11230 SPO11-203ENST00000371263 1834 ntAPPRIS P4 TSL 1 (best) BASIC14.86□□□□□ -0.03
CHRNB1P11230 ALPL-204ENST00000374840 2589 ntAPPRIS P3 TSL 1 (best) BASIC14.86□□□□□ -0.03
CHRNB1P11230 GRK6-211ENST00000528793 2571 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
CHRNB1P11230 EEPD1-205ENST00000534978 2769 ntAPPRIS P1 TSL 2 BASIC14.86□□□□□ -0.03
CHRNB1P11230 TRAF3-202ENST00000351691 2239 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
CHRNB1P11230 EGLN1-201ENST00000366641 7097 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
CHRNB1P11230 CACNA1G-201ENST00000352832 7848 ntAPPRIS ALT2 TSL 1 (best) BASIC14.86□□□□□ -0.03
CHRNB1P11230 DMTN-203ENST00000381470 2601 ntTSL 5 BASIC14.86□□□□□ -0.03
CHRNB1P11230 AP002414.2-201ENST00000591780 3365 ntBASIC14.86□□□□□ -0.03
CHRNB1P11230 REXO1L2P-201ENST00000425429 2069 ntBASIC14.86□□□□□ -0.03
CHRNB1P11230 PAK4-205ENST00000593690 3025 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
CHRNB1P11230 EPHA2-201ENST00000358432 3964 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
CHRNB1P11230 TMEM177-202ENST00000401466 1346 ntAPPRIS P1 TSL 2 BASIC14.86□□□□□ -0.03
CHRNB1P11230 AHCYP4-201ENST00000419201 1315 ntBASIC14.86□□□□□ -0.03
CHRNB1P11230 CACNA2D2-203ENST00000423994 5329 ntAPPRIS ALT2 TSL 5 BASIC14.86□□□□□ -0.03
CHRNB1P11230 ULK4-203ENST00000420927 1904 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
CHRNB1P11230 ARHGAP23-221ENST00000620417 3663 ntAPPRIS ALT2 TSL 5 BASIC14.86□□□□□ -0.03
CHRNB1P11230 ENDOV-212ENST00000520284 2500 ntTSL 2 BASIC14.86□□□□□ -0.03
CHRNB1P11230 SUCLA2-201ENST00000378654 2192 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
CHRNB1P11230 SHISA9-203ENST00000558583 6724 ntAPPRIS P4 TSL 5 BASIC14.85□□□□□ -0.03
CHRNB1P11230 HSPA12B-201ENST00000254963 3151 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
CHRNB1P11230 COL5A1-208ENST00000618395 8437 ntAPPRIS ALT2 TSL 5 BASIC14.85□□□□□ -0.03
CHRNB1P11230 AC010642.2-201ENST00000634676 2413 ntTSL 5 BASIC14.85□□□□□ -0.03
CHRNB1P11230 CCDC144A-202ENST00000340621 2214 ntTSL 2 BASIC14.85□□□□□ -0.03
CHRNB1P11230 TMEM144-209ENST00000509278 1633 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
CHRNB1P11230 ACTN2-207ENST00000546208 5103 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
CHRNB1P11230 LRRFIP1-201ENST00000244815 4370 ntAPPRIS P3 TSL 1 (best) BASIC14.85□□□□□ -0.03
CHRNB1P11230 AHDC1-201ENST00000247087 6334 ntAPPRIS P1 TSL 5 BASIC14.85□□□□□ -0.03
CHRNB1P11230 C2orf70-201ENST00000329615 731 ntAPPRIS P1 TSL 5 BASIC14.85□□□□□ -0.03
CHRNB1P11230 RAB25-201ENST00000361084 1110 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
CHRNB1P11230 IGLJ3-201ENST00000390324 176 ntAPPRIS P1 BASIC14.85□□□□□ -0.03
CHRNB1P11230 SETD7-203ENST00000406354 1127 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
CHRNB1P11230 HIST2H2BA-201ENST00000412169 381 ntBASIC14.85□□□□□ -0.03
CHRNB1P11230 CSTF3-202ENST00000431742 715 ntTSL 2 BASIC14.85□□□□□ -0.03
CHRNB1P11230 ZNF529-AS1-201ENST00000448373 1004 ntTSL 2 BASIC14.85□□□□□ -0.03
CHRNB1P11230 SHANK2-210ENST00000449116 939 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
CHRNB1P11230 AL139420.2-201ENST00000449439 410 ntTSL 3 BASIC14.85□□□□□ -0.03
CHRNB1P11230 AC108199.1-201ENST00000504249 508 ntTSL 3 BASIC14.85□□□□□ -0.03
CHRNB1P11230 AP003398.1-201ENST00000531124 318 ntBASIC14.85□□□□□ -0.03
CHRNB1P11230 ANO1-AS2-202ENST00000533327 498 ntTSL 3 BASIC14.85□□□□□ -0.03
CHRNB1P11230 SDHAF2-206ENST00000542074 835 ntTSL 2 BASIC14.85□□□□□ -0.03
CHRNB1P11230 AC003686.1-201ENST00000550956 1034 ntBASIC14.85□□□□□ -0.03
CHRNB1P11230 AC107871.2-202ENST00000563057 396 ntTSL 2 BASIC14.85□□□□□ -0.03
CHRNB1P11230 AC141586.1-203ENST00000567242 366 ntBASIC14.85□□□□□ -0.03
CHRNB1P11230 AC107464.3-201ENST00000609172 737 ntBASIC14.85□□□□□ -0.03
CHRNB1P11230 AC005618.3-201ENST00000624928 458 ntBASIC14.85□□□□□ -0.03
CHRNB1P11230 CMC2-224ENST00000630396 481 ntTSL 5 BASIC14.85□□□□□ -0.03
CHRNB1P11230 RNF168-201ENST00000318037 5347 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
CHRNB1P11230 PHF14-215ENST00000634607 3407 ntAPPRIS P1 TSL 5 BASIC14.85□□□□□ -0.03
CHRNB1P11230 AHDC1-202ENST00000374011 6438 ntAPPRIS P1 TSL 5 BASIC14.85□□□□□ -0.03
CHRNB1P11230 PAPLN-202ENST00000340738 5834 ntAPPRIS P2 TSL 5 BASIC14.85□□□□□ -0.03
CHRNB1P11230 INSIG1-201ENST00000340368 3010 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
CHRNB1P11230 KIFC3-206ENST00000541240 3047 ntTSL 2 BASIC14.85□□□□□ -0.03
CHRNB1P11230 HSD17B6-206ENST00000555159 1525 ntAPPRIS P1 TSL 5 BASIC14.85□□□□□ -0.03
CHRNB1P11230 CCDC90B-213ENST00000529611 1986 ntTSL 2 BASIC14.85□□□□□ -0.03
Retrieved 100 of 98,524 protein–RNA pairs in 49.1 ms