Protein–RNA interactions for Protein: P0C0E4

RAB40AL, Ras-related protein Rab-40A-like, humanhuman

Predictions only

Length 278 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAB40ALP0C0E4 EXOC6B-209ENST00000634650 2583 ntTSL 5 BASIC13.85□□□□□ -0.19
RAB40ALP0C0E4 PLD3-204ENST00000409281 2115 ntAPPRIS P1 TSL 2 BASIC13.85□□□□□ -0.19
RAB40ALP0C0E4 JKAMP-207ENST00000554271 2137 ntTSL 2 BASIC13.85□□□□□ -0.19
RAB40ALP0C0E4 CYB561D1-201ENST00000310611 5009 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
RAB40ALP0C0E4 CD48-203ENST00000613788 1500 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
RAB40ALP0C0E4 UGDH-201ENST00000316423 3216 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
RAB40ALP0C0E4 YY1AP1-201ENST00000295566 2626 ntAPPRIS P4 TSL 2 BASIC13.85□□□□□ -0.19
RAB40ALP0C0E4 FXN-201ENST00000377270 2608 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
RAB40ALP0C0E4 MYH11-201ENST00000300036 6029 ntAPPRIS P3 TSL 1 (best) BASIC13.85□□□□□ -0.19
RAB40ALP0C0E4 TSC22D1-211ENST00000501704 4026 ntTSL 2 BASIC13.85□□□□□ -0.19
RAB40ALP0C0E4 RSPO1-202ENST00000401068 2320 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
RAB40ALP0C0E4 SMARCA4-214ENST00000589677 5181 ntAPPRIS ALT1 TSL 5 BASIC13.85□□□□□ -0.19
RAB40ALP0C0E4 CCDC51-201ENST00000395694 1560 ntAPPRIS P1 TSL 2 BASIC13.85□□□□□ -0.19
RAB40ALP0C0E4 TAP2-201ENST00000374897 5684 ntAPPRIS P2 TSL 1 (best) BASIC13.85□□□□□ -0.19
RAB40ALP0C0E4 LINC00926-201ENST00000501726 2530 ntTSL 2 BASIC13.85□□□□□ -0.19
RAB40ALP0C0E4 COPS7B-224ENST00000620578 2500 ntTSL 2 BASIC13.85□□□□□ -0.19
RAB40ALP0C0E4 MYL6-219ENST00000551589 1438 ntAPPRIS ALT1 TSL 2 BASIC13.85□□□□□ -0.19
RAB40ALP0C0E4 RER1-203ENST00000378513 3000 ntTSL 3 BASIC13.85□□□□□ -0.19
RAB40ALP0C0E4 PSMB5-202ENST00000361611 1294 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
RAB40ALP0C0E4 PSMB5-203ENST00000425762 900 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
RAB40ALP0C0E4 PTPA-215ENST00000432124 567 ntTSL 4 BASIC13.85□□□□□ -0.19
RAB40ALP0C0E4 PTPA-217ENST00000434095 870 ntTSL 2 BASIC13.85□□□□□ -0.19
RAB40ALP0C0E4 AL160290.2-202ENST00000448671 574 ntTSL 3 BASIC13.85□□□□□ -0.19
RAB40ALP0C0E4 AC018680.1-202ENST00000500324 525 ntTSL 3 BASIC13.85□□□□□ -0.19
RAB40ALP0C0E4 AC011773.1-201ENST00000520129 468 ntTSL 5 BASIC13.85□□□□□ -0.19
RAB40ALP0C0E4 AC015689.1-201ENST00000525365 462 ntTSL 2 BASIC13.85□□□□□ -0.19
RAB40ALP0C0E4 AC016044.1-201ENST00000560818 572 ntTSL 4 BASIC13.85□□□□□ -0.19
RAB40ALP0C0E4 AC007333.1-201ENST00000568286 630 ntTSL 3 BASIC13.85□□□□□ -0.19
RAB40ALP0C0E4 MIR3907-201ENST00000579424 151 ntBASIC13.85□□□□□ -0.19
RAB40ALP0C0E4 AC243964.2-201ENST00000590796 829 ntTSL 5 BASIC13.85□□□□□ -0.19
RAB40ALP0C0E4 ZFR2-208ENST00000592398 532 ntTSL 5 BASIC13.85□□□□□ -0.19
RAB40ALP0C0E4 PYY-202ENST00000592796 580 ntAPPRIS ALT1 TSL 1 (best) BASIC13.85□□□□□ -0.19
RAB40ALP0C0E4 HDDC2-204ENST00000608295 879 ntTSL 5 BASIC13.85□□□□□ -0.19
RAB40ALP0C0E4 AL353726.2-201ENST00000623259 884 ntBASIC13.85□□□□□ -0.19
RAB40ALP0C0E4 MVK-217ENST00000639206 367 ntTSL 5 BASIC13.85□□□□□ -0.19
RAB40ALP0C0E4 TAF6-201ENST00000344095 2727 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
RAB40ALP0C0E4 AP000550.1-201ENST00000420508 4833 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
RAB40ALP0C0E4 PDE8B-202ENST00000333194 2572 ntAPPRIS ALT2 TSL 1 (best) BASIC13.85□□□□□ -0.19
RAB40ALP0C0E4 LINC00552-201ENST00000625151 2579 ntBASIC13.85□□□□□ -0.19
RAB40ALP0C0E4 PXN-221ENST00000637617 3246 ntAPPRIS ALT2 TSL 5 BASIC13.85□□□□□ -0.19
RAB40ALP0C0E4 CEP78-203ENST00000376598 2404 ntAPPRIS ALT2 TSL 5 BASIC13.85□□□□□ -0.19
RAB40ALP0C0E4 MBOAT2-201ENST00000305997 7751 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
RAB40ALP0C0E4 POU5F1B-201ENST00000465342 5360 ntAPPRIS P1 TSL 3 BASIC13.85□□□□□ -0.19
RAB40ALP0C0E4 NPHP3-AS1-201ENST00000489343 2957 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
RAB40ALP0C0E4 PRKD2-206ENST00000595515 3012 ntTSL 2 BASIC13.85□□□□□ -0.19
RAB40ALP0C0E4 PATZ1-204ENST00000405309 3711 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
RAB40ALP0C0E4 ARPP19-202ENST00000561650 3245 ntTSL 2 BASIC13.85□□□□□ -0.19
RAB40ALP0C0E4 RASD2-201ENST00000216127 3412 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
RAB40ALP0C0E4 LRRTM1-201ENST00000295057 2599 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
RAB40ALP0C0E4 ID2-203ENST00000396290 1362 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
RAB40ALP0C0E4 PCDHB14-201ENST00000239449 4828 ntAPPRIS P1 BASIC13.84□□□□□ -0.19
RAB40ALP0C0E4 MAGEA1-201ENST00000356661 1710 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
RAB40ALP0C0E4 PEX11B-201ENST00000369306 1740 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
RAB40ALP0C0E4 FGF7P3-202ENST00000640245 1707 ntTSL 4 BASIC13.84□□□□□ -0.19
RAB40ALP0C0E4 TSPAN11-201ENST00000261177 5505 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
RAB40ALP0C0E4 ZNF18-201ENST00000322748 2767 ntAPPRIS P3 TSL 2 BASIC13.84□□□□□ -0.19
RAB40ALP0C0E4 MCM3AP-AS1-203ENST00000421927 2280 ntTSL 2 BASIC13.84□□□□□ -0.19
RAB40ALP0C0E4 AC007326.2-201ENST00000624224 7579 ntBASIC13.84□□□□□ -0.19
RAB40ALP0C0E4 RPH3AL-201ENST00000323434 2809 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
RAB40ALP0C0E4 PPM1F-201ENST00000263212 5143 ntAPPRIS P2 TSL 1 (best) BASIC13.84□□□□□ -0.19
RAB40ALP0C0E4 FGD5P1-202ENST00000614866 2498 ntBASIC13.84□□□□□ -0.19
RAB40ALP0C0E4 GRB7-203ENST00000394209 1955 ntAPPRIS P1 TSL 2 BASIC13.84□□□□□ -0.19
RAB40ALP0C0E4 PNPLA5-201ENST00000216177 2539 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
RAB40ALP0C0E4 FECH-202ENST00000382873 2526 ntAPPRIS ALT2 TSL 2 BASIC13.84□□□□□ -0.19
RAB40ALP0C0E4 BOLA3-201ENST00000295326 444 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
RAB40ALP0C0E4 ALG1L-201ENST00000340333 805 ntAPPRIS P3 TSL 1 (best) BASIC13.84□□□□□ -0.19
RAB40ALP0C0E4 SERPINE3-201ENST00000400389 1218 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
RAB40ALP0C0E4 AL357558.1-201ENST00000416646 456 ntTSL 2 BASIC13.84□□□□□ -0.19
RAB40ALP0C0E4 BX284668.5-201ENST00000422124 406 ntTSL 2 BASIC13.84□□□□□ -0.19
RAB40ALP0C0E4 CMC1-204ENST00000423894 549 ntTSL 2 BASIC13.84□□□□□ -0.19
RAB40ALP0C0E4 ISCA2P1-201ENST00000425548 448 ntBASIC13.84□□□□□ -0.19
RAB40ALP0C0E4 AL139412.1-202ENST00000452465 675 ntTSL 3 BASIC13.84□□□□□ -0.19
RAB40ALP0C0E4 AP001547.1-201ENST00000527440 374 ntTSL 3 BASIC13.84□□□□□ -0.19
RAB40ALP0C0E4 NDUFC2-204ENST00000528164 561 ntTSL 2 BASIC13.84□□□□□ -0.19
RAB40ALP0C0E4 TP53AIP1-204ENST00000530777 363 ntAPPRIS ALT2 TSL 1 (best) BASIC13.84□□□□□ -0.19
RAB40ALP0C0E4 AL645941.3-201ENST00000580587 577 ntTSL 4 BASIC13.84□□□□□ -0.19
RAB40ALP0C0E4 AC127024.2-201ENST00000581019 789 ntTSL 5 BASIC13.84□□□□□ -0.19
RAB40ALP0C0E4 ALG1L-202ENST00000611639 701 ntAPPRIS ALT2 TSL 3 BASIC13.84□□□□□ -0.19
RAB40ALP0C0E4 NDUFB5-216ENST00000611971 951 ntTSL 2 BASIC13.84□□□□□ -0.19
RAB40ALP0C0E4 SIRT2-219ENST00000613542 1170 ntTSL 5 BASIC13.84□□□□□ -0.19
RAB40ALP0C0E4 AL021997.3-201ENST00000621053 557 ntAPPRIS P1 TSL 4 BASIC13.84□□□□□ -0.19
RAB40ALP0C0E4 EVA1A-202ENST00000393913 1802 ntAPPRIS P2 TSL 1 (best) BASIC13.84□□□□□ -0.19
RAB40ALP0C0E4 SMYD1-203ENST00000444564 1816 ntTSL 5 BASIC13.84□□□□□ -0.19
RAB40ALP0C0E4 ZNF286A-218ENST00000583566 1806 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
RAB40ALP0C0E4 IGFBP5-201ENST00000233813 6215 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
RAB40ALP0C0E4 FBXO5-202ENST00000367241 2221 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
RAB40ALP0C0E4 TTC29-208ENST00000513335 2226 ntAPPRIS ALT2 TSL 2 BASIC13.84□□□□□ -0.19
RAB40ALP0C0E4 DUSP11-201ENST00000272444 1653 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
RAB40ALP0C0E4 NRBF2-201ENST00000277746 1853 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
RAB40ALP0C0E4 PRPS1-204ENST00000372435 2073 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
RAB40ALP0C0E4 LSS-202ENST00000397728 4936 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
RAB40ALP0C0E4 ZNF800-201ENST00000265827 4203 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
RAB40ALP0C0E4 BAIAP2-201ENST00000321280 1939 ntAPPRIS ALT2 TSL 1 (best) BASIC13.84□□□□□ -0.19
RAB40ALP0C0E4 PDP1-203ENST00000517764 2140 ntAPPRIS P3 TSL 2 BASIC13.84□□□□□ -0.19
RAB40ALP0C0E4 RBM46-204ENST00000514866 2315 ntTSL 2 BASIC13.84□□□□□ -0.19
RAB40ALP0C0E4 CEP63-212ENST00000513612 2903 ntAPPRIS P3 TSL 2 BASIC13.84□□□□□ -0.19
RAB40ALP0C0E4 PCDHGB8P-201ENST00000502926 1973 ntBASIC13.83□□□□□ -0.19
RAB40ALP0C0E4 TBC1D1-219ENST00000615497 2383 ntTSL 2 BASIC13.83□□□□□ -0.19
RAB40ALP0C0E4 TMEM41B-204ENST00000528080 3968 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.19
RAB40ALP0C0E4 FGD5-206ENST00000543601 5768 ntTSL 1 (best) BASIC13.83□□□□□ -0.19
Retrieved 100 of 98,524 protein–RNA pairs in 41.8 ms