Protein–RNA interactions for Protein: P09496

CLTA, Clathrin light chain A, humanhuman

Predictions only

Length 248 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLTAP09496 HAND2-AS1-202ENST00000502896 5278 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
CLTAP09496 TPCN1-214ENST00000550785 5345 ntTSL 2 BASIC16.12■□□□□ 0.17
CLTAP09496 GLT1D1-201ENST00000281703 2725 ntTSL 2 BASIC16.12■□□□□ 0.17
CLTAP09496 TAF6-201ENST00000344095 2727 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
CLTAP09496 SOX7-201ENST00000304501 3216 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
CLTAP09496 MRPL37P1-201ENST00000592451 1337 ntBASIC16.12■□□□□ 0.17
CLTAP09496 HOXC11-202ENST00000546378 3261 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
CLTAP09496 TMCO3-202ENST00000434316 3050 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
CLTAP09496 PTPRO-201ENST00000281171 5301 ntAPPRIS P3 TSL 1 (best) BASIC16.12■□□□□ 0.17
CLTAP09496 CDC37-201ENST00000222005 1608 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
CLTAP09496 TMEM106C-201ENST00000256686 1394 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
CLTAP09496 INTS11-204ENST00000421495 1868 ntTSL 2 BASIC16.12■□□□□ 0.17
CLTAP09496 OSCP1-204ENST00000433045 1381 ntTSL 5 BASIC16.12■□□□□ 0.17
CLTAP09496 POU5F1B-201ENST00000465342 5360 ntAPPRIS P1 TSL 3 BASIC16.12■□□□□ 0.17
CLTAP09496 CELF2-206ENST00000608830 1892 ntAPPRIS ALT1 TSL 1 (best) BASIC16.12■□□□□ 0.17
CLTAP09496 ALDOA-228ENST00000627059 2402 ntAPPRIS ALT1 TSL 5 BASIC16.11■□□□□ 0.17
CLTAP09496 PNPLA5-204ENST00000593866 2197 ntTSL 2 BASIC16.11■□□□□ 0.17
CLTAP09496 EML4-201ENST00000318522 5549 ntAPPRIS P3 TSL 1 (best) BASIC16.11■□□□□ 0.17
CLTAP09496 AMPD2-218ENST00000528454 2728 ntTSL 2 BASIC16.11■□□□□ 0.17
CLTAP09496 KIF1C-201ENST00000320785 7919 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
CLTAP09496 ARNT2-204ENST00000527771 2458 ntAPPRIS ALT1 TSL 2 BASIC16.11■□□□□ 0.17
CLTAP09496 ZFP64-201ENST00000216923 3264 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
CLTAP09496 OBSL1-202ENST00000373873 3297 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
CLTAP09496 GIPC2-201ENST00000370759 3847 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
CLTAP09496 SEC24D-202ENST00000419654 2786 ntTSL 5 BASIC16.11■□□□□ 0.17
CLTAP09496 FARP1-214ENST00000595437 4926 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
CLTAP09496 NATD1-201ENST00000611551 4931 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
CLTAP09496 APBA1-201ENST00000265381 6534 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
CLTAP09496 WASH2P-202ENST00000538033 2800 ntTSL 2 BASIC16.11■□□□□ 0.17
CLTAP09496 USP28-214ENST00000545540 3431 ntTSL 2 BASIC16.11■□□□□ 0.17
CLTAP09496 AUTS2-218ENST00000615871 4511 ntTSL 5 BASIC16.11■□□□□ 0.17
CLTAP09496 RAB11FIP1-201ENST00000287263 6253 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
CLTAP09496 ARMCX4-202ENST00000423738 7424 ntAPPRIS P1 TSL 5 BASIC16.11■□□□□ 0.17
CLTAP09496 AP4M1-201ENST00000359593 1817 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
CLTAP09496 AP4M1-206ENST00000429084 1836 ntTSL 5 BASIC16.11■□□□□ 0.17
CLTAP09496 CRABP1-201ENST00000299529 772 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
CLTAP09496 FZR1-201ENST00000313639 1215 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
CLTAP09496 TPD52L2-207ENST00000369927 1094 ntTSL 4 BASIC16.11■□□□□ 0.17
CLTAP09496 AK6-201ENST00000380818 1183 ntTSL 2 BASIC16.11■□□□□ 0.17
CLTAP09496 AL139289.2-201ENST00000424948 661 ntTSL 2 BASIC16.11■□□□□ 0.17
CLTAP09496 GLIS3-AS1-201ENST00000451340 734 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
CLTAP09496 USB1-203ENST00000539737 1212 ntTSL 2 BASIC16.11■□□□□ 0.17
CLTAP09496 AC008115.1-201ENST00000542291 150 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
CLTAP09496 AL021546.1-201ENST00000551806 552 ntAPPRIS P1 TSL 3 BASIC16.11■□□□□ 0.17
CLTAP09496 CD63-214ENST00000552692 949 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
CLTAP09496 AC025154.1-201ENST00000552806 560 ntTSL 5 BASIC16.11■□□□□ 0.17
CLTAP09496 DUX4L46-201ENST00000566845 751 ntBASIC16.11■□□□□ 0.17
CLTAP09496 NRN1L-202ENST00000576147 681 ntAPPRIS ALT2 TSL 2 BASIC16.11■□□□□ 0.17
CLTAP09496 AC021594.1-201ENST00000587174 636 ntTSL 3 BASIC16.11■□□□□ 0.17
CLTAP09496 AC024941.2-201ENST00000625763 493 ntTSL 2 BASIC16.11■□□□□ 0.17
CLTAP09496 TMEM230-202ENST00000342308 1562 ntTSL 2 BASIC16.11■□□□□ 0.17
CLTAP09496 MSI2-202ENST00000322684 1860 ntAPPRIS ALT2 TSL 2 BASIC16.11■□□□□ 0.17
CLTAP09496 USP47-207ENST00000527733 4525 ntAPPRIS P3 TSL 1 (best) BASIC16.11■□□□□ 0.17
CLTAP09496 PPM1F-201ENST00000263212 5143 ntAPPRIS P2 TSL 1 (best) BASIC16.11■□□□□ 0.17
CLTAP09496 SPIN2A-201ENST00000374906 1319 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
CLTAP09496 ARHGAP9-213ENST00000550288 2818 ntTSL 2 BASIC16.11■□□□□ 0.17
CLTAP09496 LINC00839-202ENST00000429940 2253 ntTSL 2 BASIC16.11■□□□□ 0.17
CLTAP09496 ZNF586-202ENST00000396150 1977 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
CLTAP09496 SLC8B1-202ENST00000546737 1656 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
CLTAP09496 AL136172.1-201ENST00000598590 1394 ntBASIC16.11■□□□□ 0.17
CLTAP09496 LIN9-201ENST00000328205 3567 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
CLTAP09496 CPEB2-205ENST00000442003 6797 ntAPPRIS ALT2 TSL 5 BASIC16.1■□□□□ 0.17
CLTAP09496 AC092135.3-201ENST00000624151 1846 ntBASIC16.1■□□□□ 0.17
CLTAP09496 UNC5A-201ENST00000329542 3812 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
CLTAP09496 DCUN1D3-201ENST00000324344 6162 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
CLTAP09496 CYP26A1-202ENST00000371531 2245 ntTSL 2 BASIC16.1■□□□□ 0.17
CLTAP09496 SCYL1-208ENST00000527009 2586 ntTSL 5 BASIC16.1■□□□□ 0.17
CLTAP09496 ANKRD35-201ENST00000355594 3342 ntAPPRIS P1 TSL 2 BASIC16.1■□□□□ 0.17
CLTAP09496 ACSF2-202ENST00000427954 2251 ntTSL 2 BASIC16.1■□□□□ 0.17
CLTAP09496 NRAS-201ENST00000369535 4449 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
CLTAP09496 SLC27A3-201ENST00000271857 3351 ntAPPRIS ALT2 TSL 1 (best) BASIC16.1■□□□□ 0.17
CLTAP09496 ABCG1-201ENST00000343687 3037 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
CLTAP09496 RBM38-204ENST00000371219 760 ntTSL 2 BASIC16.1■□□□□ 0.17
CLTAP09496 USE1-202ENST00000445667 795 ntAPPRIS ALT1 TSL 5 BASIC16.1■□□□□ 0.17
CLTAP09496 AC104306.2-201ENST00000451877 341 ntBASIC16.1■□□□□ 0.17
CLTAP09496 CRYGN-205ENST00000491928 698 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
CLTAP09496 AC120498.1-201ENST00000563593 476 ntTSL 4 BASIC16.1■□□□□ 0.17
CLTAP09496 AC129510.1-201ENST00000579979 555 ntTSL 3 BASIC16.1■□□□□ 0.17
CLTAP09496 AC009955.4-201ENST00000597192 544 ntBASIC16.1■□□□□ 0.17
CLTAP09496 LINC02028-216ENST00000609015 732 ntTSL 5 BASIC16.1■□□□□ 0.17
CLTAP09496 DIO1-215ENST00000610607 796 ntTSL 5 BASIC16.1■□□□□ 0.17
CLTAP09496 FDPS-221ENST00000612683 1198 ntAPPRIS ALT1 TSL 5 BASIC16.1■□□□□ 0.17
CLTAP09496 AL008638.5-201ENST00000623814 1298 ntBASIC16.1■□□□□ 0.17
CLTAP09496 SLCO4C1-201ENST00000310954 5334 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
CLTAP09496 NF2-205ENST00000361452 5884 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
CLTAP09496 AC112229.3-201ENST00000603767 3202 ntAPPRIS P1 TSL 2 BASIC16.1■□□□□ 0.17
CLTAP09496 AC013271.1-201ENST00000640669 3202 ntAPPRIS P1 TSL 2 BASIC16.1■□□□□ 0.17
CLTAP09496 BCAR3-210ENST00000539242 2114 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
CLTAP09496 SPOCK3-201ENST00000357154 2986 ntAPPRIS ALT2 TSL 5 BASIC16.1■□□□□ 0.17
CLTAP09496 GRM1-201ENST00000282753 6622 ntAPPRIS P3 TSL 1 (best) BASIC16.1■□□□□ 0.17
CLTAP09496 HIST1H2AG-201ENST00000359193 2250 ntAPPRIS P1 BASIC16.1■□□□□ 0.17
CLTAP09496 SLC29A1-204ENST00000371731 2258 ntAPPRIS P1 TSL 5 BASIC16.1■□□□□ 0.17
CLTAP09496 MAPK4-201ENST00000400384 4770 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
CLTAP09496 NEK2-201ENST00000366998 1865 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
CLTAP09496 CPEB2-209ENST00000538197 6878 ntAPPRIS P4 TSL 5 BASIC16.1■□□□□ 0.17
CLTAP09496 AC107918.4-201ENST00000641966 3141 ntBASIC16.1■□□□□ 0.17
CLTAP09496 LDLR-202ENST00000455727 2333 ntTSL 2 BASIC16.1■□□□□ 0.17
CLTAP09496 TMEM209-202ENST00000462753 2322 ntAPPRIS ALT1 TSL 5 BASIC16.1■□□□□ 0.17
CLTAP09496 STK40-204ENST00000373132 3621 ntAPPRIS P3 TSL 1 (best) BASIC16.09■□□□□ 0.17
CLTAP09496 ZNF596-201ENST00000308811 2783 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Retrieved 100 of 98,524 protein–RNA pairs in 48.7 ms