Protein–RNA interactions for Protein: O60759

CYTIP, Cytohesin-interacting protein, humanhuman

Predictions only

Length 359 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CYTIPO60759 ATG5-201ENST00000343245 3092 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
CYTIPO60759 DCAKD-201ENST00000310604 2122 ntAPPRIS P1 TSL 5 BASIC13.15□□□□□ -0.3
CYTIPO60759 RIC1-201ENST00000251879 4127 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
CYTIPO60759 C9orf47-201ENST00000334490 4829 ntAPPRIS P3 TSL 1 (best) BASIC13.15□□□□□ -0.3
CYTIPO60759 AL359915.2-205ENST00000418015 1529 ntTSL 2 BASIC13.15□□□□□ -0.3
CYTIPO60759 SNPH-203ENST00000614659 5354 ntAPPRIS ALT2 TSL 1 (best) BASIC13.15□□□□□ -0.3
CYTIPO60759 ZNF618-207ENST00000615615 9289 ntAPPRIS ALT2 TSL 1 (best) BASIC13.15□□□□□ -0.3
CYTIPO60759 RUFY2-202ENST00000342616 983 ntTSL 2 BASIC13.15□□□□□ -0.3
CYTIPO60759 HIST3H3-201ENST00000366696 481 ntAPPRIS P1 BASIC13.15□□□□□ -0.3
CYTIPO60759 PTPA-215ENST00000432124 567 ntTSL 4 BASIC13.15□□□□□ -0.3
CYTIPO60759 PFN1P12-201ENST00000455938 534 ntBASIC13.15□□□□□ -0.3
CYTIPO60759 APOA2-204ENST00000464492 530 ntTSL 3 BASIC13.15□□□□□ -0.3
CYTIPO60759 ATP6V0CP2-201ENST00000469409 207 ntBASIC13.15□□□□□ -0.3
CYTIPO60759 MSC-AS1-204ENST00000518916 864 ntTSL 3 BASIC13.15□□□□□ -0.3
CYTIPO60759 GSTZ1-219ENST00000557639 873 ntTSL 2 BASIC13.15□□□□□ -0.3
CYTIPO60759 AC012568.1-201ENST00000558463 472 ntTSL 2 BASIC13.15□□□□□ -0.3
CYTIPO60759 THAP4-206ENST00000612200 969 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
CYTIPO60759 PRKN-211ENST00000615065 261 ntTSL 5 BASIC13.15□□□□□ -0.3
CYTIPO60759 AL096828.3-201ENST00000615354 462 ntBASIC13.15□□□□□ -0.3
CYTIPO60759 AC114737.3-201ENST00000636708 570 ntTSL 4 BASIC13.15□□□□□ -0.3
CYTIPO60759 CTBP1-AS2-205ENST00000578730 2757 ntTSL 2 BASIC13.15□□□□□ -0.3
CYTIPO60759 CDT1-201ENST00000301019 3240 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
CYTIPO60759 RUBCNL-204ENST00000378797 3206 ntAPPRIS ALT2 TSL 1 (best) BASIC13.15□□□□□ -0.3
CYTIPO60759 KCNC3-202ENST00000474951 3347 ntTSL 2 BASIC13.15□□□□□ -0.3
CYTIPO60759 RUFY1-204ENST00000437570 2642 ntAPPRIS ALT2 TSL 2 BASIC13.15□□□□□ -0.3
CYTIPO60759 AL121757.1-201ENST00000430097 1836 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
CYTIPO60759 MEX3B-201ENST00000329713 3528 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
CYTIPO60759 MYLK-201ENST00000346322 5892 ntAPPRIS ALT2 TSL 5 BASIC13.15□□□□□ -0.3
CYTIPO60759 ELF4-201ENST00000308167 4165 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
CYTIPO60759 CDK16-211ENST00000518022 2022 ntAPPRIS P1 TSL 2 BASIC13.15□□□□□ -0.3
CYTIPO60759 PAQR6-214ENST00000613336 1599 ntTSL 3 BASIC13.15□□□□□ -0.3
CYTIPO60759 ZNF497-201ENST00000311044 3468 ntAPPRIS P1 TSL 2 BASIC13.15□□□□□ -0.3
CYTIPO60759 DDX55-201ENST00000238146 2654 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.31
CYTIPO60759 SERPINA3-203ENST00000467132 2660 ntAPPRIS P1 TSL 2 BASIC13.15□□□□□ -0.31
CYTIPO60759 TCAIM-201ENST00000342649 3687 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.31
CYTIPO60759 SYBU-235ENST00000533895 3244 ntAPPRIS P4 TSL 1 (best) BASIC13.15□□□□□ -0.31
CYTIPO60759 ELAVL2-201ENST00000223951 3763 ntAPPRIS ALT1 TSL 1 (best) BASIC13.15□□□□□ -0.31
CYTIPO60759 RGS6-217ENST00000555571 1764 ntAPPRIS P3 TSL 1 (best) BASIC13.15□□□□□ -0.31
CYTIPO60759 ANKRD35-201ENST00000355594 3342 ntAPPRIS P1 TSL 2 BASIC13.15□□□□□ -0.31
CYTIPO60759 RHOH-218ENST00000613272 1865 ntAPPRIS P1 TSL 3 BASIC13.14□□□□□ -0.31
CYTIPO60759 DUOXA1-216ENST00000613425 1867 ntTSL 5 BASIC13.14□□□□□ -0.31
CYTIPO60759 CHN2-201ENST00000222792 3530 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
CYTIPO60759 ZNF587-203ENST00000423137 1974 ntAPPRIS ALT2 TSL 1 (best) BASIC13.14□□□□□ -0.31
CYTIPO60759 TOMM34-201ENST00000372813 2062 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
CYTIPO60759 REPIN1-201ENST00000397281 3292 ntAPPRIS P3 TSL 2 BASIC13.14□□□□□ -0.31
CYTIPO60759 ZFP41-203ENST00000520584 3284 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
CYTIPO60759 CCR7-201ENST00000246657 2173 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
CYTIPO60759 TGM6-201ENST00000202625 2292 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
CYTIPO60759 FAM186B-201ENST00000257894 2944 ntAPPRIS P2 TSL 1 (best) BASIC13.14□□□□□ -0.31
CYTIPO60759 ZNF683-201ENST00000349618 1610 ntAPPRIS P3 TSL 1 (best) BASIC13.14□□□□□ -0.31
CYTIPO60759 SUOX-204ENST00000394115 2394 ntAPPRIS P1 TSL 2 BASIC13.14□□□□□ -0.31
CYTIPO60759 KNSTRN-201ENST00000249776 1714 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
CYTIPO60759 INSC-208ENST00000530161 1702 ntAPPRIS ALT2 TSL 1 (best) BASIC13.14□□□□□ -0.31
CYTIPO60759 VPS36-207ENST00000611132 4607 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
CYTIPO60759 AP4M1-201ENST00000359593 1817 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
CYTIPO60759 AP4M1-206ENST00000429084 1836 ntTSL 5 BASIC13.14□□□□□ -0.31
CYTIPO60759 TRAF1-201ENST00000373887 6324 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
CYTIPO60759 NEIL2-201ENST00000284503 2671 ntAPPRIS P1 TSL 2 BASIC13.14□□□□□ -0.31
CYTIPO60759 MAGEA2-203ENST00000611557 2024 ntAPPRIS P1 TSL 5 BASIC13.14□□□□□ -0.31
CYTIPO60759 RPS3-201ENST00000278572 907 ntTSL 3 BASIC13.14□□□□□ -0.31
CYTIPO60759 MRPL43-206ENST00000370236 866 ntAPPRIS P1 TSL 2 BASIC13.14□□□□□ -0.31
CYTIPO60759 MRPL43-207ENST00000370241 824 ntTSL 5 BASIC13.14□□□□□ -0.31
CYTIPO60759 HIST1H2AH-201ENST00000377459 387 ntAPPRIS P1 BASIC13.14□□□□□ -0.31
CYTIPO60759 DYNC1I1-203ENST00000413338 958 ntTSL 2 BASIC13.14□□□□□ -0.31
CYTIPO60759 AL450469.2-201ENST00000427132 499 ntTSL 3 BASIC13.14□□□□□ -0.31
CYTIPO60759 FAM58BP-201ENST00000439056 645 ntBASIC13.14□□□□□ -0.31
CYTIPO60759 Z94721.1-201ENST00000444102 385 ntTSL 5 BASIC13.14□□□□□ -0.31
CYTIPO60759 AL450003.2-201ENST00000450445 428 ntTSL 5 BASIC13.14□□□□□ -0.31
CYTIPO60759 LINC01248-201ENST00000458264 468 ntTSL 3 BASIC13.14□□□□□ -0.31
CYTIPO60759 STARD4-205ENST00000505803 803 ntAPPRIS P1 TSL 2 BASIC13.14□□□□□ -0.31
CYTIPO60759 STARD4-207ENST00000509887 1186 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
CYTIPO60759 MUTYH-237ENST00000531105 501 ntTSL 5 BASIC13.14□□□□□ -0.31
CYTIPO60759 MT1H-202ENST00000569155 697 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
CYTIPO60759 AC129510.1-201ENST00000579979 555 ntTSL 3 BASIC13.14□□□□□ -0.31
CYTIPO60759 AC005695.3-201ENST00000614522 232 ntBASIC13.14□□□□□ -0.31
CYTIPO60759 UBXN1-218ENST00000616865 1002 ntTSL 5 BASIC13.14□□□□□ -0.31
CYTIPO60759 CYP4B1-215ENST00000640628 969 ntTSL 5 BASIC13.14□□□□□ -0.31
CYTIPO60759 MLF1-201ENST00000355893 2203 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
CYTIPO60759 HSFX2-201ENST00000598963 1365 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
CYTIPO60759 DDX56-201ENST00000258772 2336 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
CYTIPO60759 CRYBG2-210ENST00000527815 2523 ntAPPRIS ALT2 TSL 2 BASIC13.14□□□□□ -0.31
CYTIPO60759 GLIPR1L2-204ENST00000550916 2609 ntAPPRIS ALT2 TSL 1 (best) BASIC13.14□□□□□ -0.31
CYTIPO60759 C12orf76-209ENST00000615315 1580 ntTSL 5 BASIC13.14□□□□□ -0.31
CYTIPO60759 PERM1-201ENST00000341290 3035 ntAPPRIS ALT2 TSL 2 BASIC13.14□□□□□ -0.31
CYTIPO60759 RCSD1-206ENST00000537350 3044 ntAPPRIS ALT2 TSL 1 (best) BASIC13.14□□□□□ -0.31
CYTIPO60759 ATXN2L-202ENST00000336783 4367 ntAPPRIS ALT2 TSL 1 (best) BASIC13.14□□□□□ -0.31
CYTIPO60759 POLR1E-202ENST00000377798 1868 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
CYTIPO60759 CHEK2-204ENST00000382580 1971 ntAPPRIS ALT2 TSL 1 (best) BASIC13.14□□□□□ -0.31
CYTIPO60759 IL1RAP-209ENST00000422940 1957 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
CYTIPO60759 MAMLD1-203ENST00000370401 4854 ntAPPRIS P3 TSL 5 BASIC13.14□□□□□ -0.31
CYTIPO60759 FBXO41-201ENST00000295133 6928 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
CYTIPO60759 UBE2D1-201ENST00000373910 2659 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
CYTIPO60759 SLC52A3-205ENST00000632431 2694 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
CYTIPO60759 PARP10-201ENST00000313028 3497 ntAPPRIS P3 TSL 1 (best) BASIC13.14□□□□□ -0.31
CYTIPO60759 UROD-201ENST00000246337 1300 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
CYTIPO60759 LINC00327-203ENST00000576696 1308 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
CYTIPO60759 PTOV1-214ENST00000600603 1443 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
CYTIPO60759 CRLF2-201ENST00000381566 1545 ntAPPRIS P1 TSL 5 BASIC13.13□□□□□ -0.31
CYTIPO60759 CD48-203ENST00000613788 1500 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
CYTIPO60759 AC015688.4-201ENST00000580780 1647 ntBASIC13.13□□□□□ -0.31
Retrieved 100 of 98,524 protein–RNA pairs in 35.5 ms