Protein–RNA interactions for Protein: O43734

TRAF3IP2, Adapter protein CIKS, humanhuman

Predicted RBP Predictions only

Length 574 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF3IP2O43734 MCHR2-201ENST00000281806 2368 ntAPPRIS P1 TSL 2 BASIC13.1□□□□□ -0.31
TRAF3IP2O43734 DCUN1D3-201ENST00000324344 6162 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
TRAF3IP2O43734 SIGLEC9-202ENST00000440804 1960 ntAPPRIS ALT2 TSL 2 BASIC13.1□□□□□ -0.31
TRAF3IP2O43734 ZNF655-201ENST00000252713 2535 ntAPPRIS P3 TSL 1 (best) BASIC13.1□□□□□ -0.31
TRAF3IP2O43734 KATNA1-201ENST00000335643 1564 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
TRAF3IP2O43734 GPSM1-202ENST00000354753 3533 ntAPPRIS ALT2 TSL 5 BASIC13.1□□□□□ -0.31
TRAF3IP2O43734 CENPO-202ENST00000380834 4386 ntAPPRIS P1 TSL 5 BASIC13.1□□□□□ -0.31
TRAF3IP2O43734 GDAP1L1-207ENST00000612599 2585 ntTSL 3 BASIC13.1□□□□□ -0.31
TRAF3IP2O43734 PDE8B-203ENST00000340978 3426 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
TRAF3IP2O43734 RHOH-220ENST00000615083 2156 ntAPPRIS P1 TSL 4 BASIC13.1□□□□□ -0.31
TRAF3IP2O43734 USP4-203ENST00000415188 1454 ntTSL 3 BASIC13.1□□□□□ -0.31
TRAF3IP2O43734 KDM5B-202ENST00000367264 6449 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
TRAF3IP2O43734 UCKL1-AS1-201ENST00000623569 3602 ntBASIC13.09□□□□□ -0.31
TRAF3IP2O43734 GNPNAT1-203ENST00000554230 2238 ntTSL 5 BASIC13.09□□□□□ -0.31
TRAF3IP2O43734 CHRD-206ENST00000450923 3384 ntAPPRIS ALT2 TSL 1 (best) BASIC13.09□□□□□ -0.31
TRAF3IP2O43734 IRF2BP2-201ENST00000366609 4663 ntAPPRIS P3 TSL 1 (best) BASIC13.09□□□□□ -0.31
TRAF3IP2O43734 SLC4A7-210ENST00000440156 4120 ntAPPRIS ALT2 TSL 1 (best) BASIC13.09□□□□□ -0.31
TRAF3IP2O43734 PODN-202ENST00000371500 3287 ntAPPRIS ALT2 TSL 1 (best) BASIC13.09□□□□□ -0.31
TRAF3IP2O43734 PDYN-AS1-201ENST00000446562 1802 ntTSL 2 BASIC13.09□□□□□ -0.31
TRAF3IP2O43734 SLC7A8-212ENST00000529705 1819 ntTSL 2 BASIC13.09□□□□□ -0.31
TRAF3IP2O43734 AC013472.1-203ENST00000380387 1966 ntTSL 4 BASIC13.09□□□□□ -0.31
TRAF3IP2O43734 MINPP1-202ENST00000371996 2415 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
TRAF3IP2O43734 ZNF559-202ENST00000393883 5095 ntAPPRIS P3 TSL 2 BASIC13.09□□□□□ -0.31
TRAF3IP2O43734 C9orf47-201ENST00000334490 4829 ntAPPRIS P3 TSL 1 (best) BASIC13.09□□□□□ -0.31
TRAF3IP2O43734 EIF3G-201ENST00000253108 1103 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
TRAF3IP2O43734 BPI-201ENST00000262865 1874 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
TRAF3IP2O43734 NPPC-201ENST00000295440 500 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
TRAF3IP2O43734 CYB561D1-201ENST00000310611 5009 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
TRAF3IP2O43734 POMK-201ENST00000331373 1865 ntAPPRIS P1 TSL 2 BASIC13.09□□□□□ -0.31
TRAF3IP2O43734 IL9R-202ENST00000369423 2032 ntAPPRIS ALT2 TSL 1 (best) BASIC13.09□□□□□ -0.31
TRAF3IP2O43734 TPD52L2-207ENST00000369927 1094 ntTSL 4 BASIC13.09□□□□□ -0.31
TRAF3IP2O43734 RBM38-204ENST00000371219 760 ntTSL 2 BASIC13.09□□□□□ -0.31
TRAF3IP2O43734 GBGT1-202ENST00000372038 847 ntTSL 3 BASIC13.09□□□□□ -0.31
TRAF3IP2O43734 CD164L2-203ENST00000374030 993 ntAPPRIS ALT1 TSL 5 BASIC13.09□□□□□ -0.31
TRAF3IP2O43734 FES-202ENST00000394300 2302 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
TRAF3IP2O43734 ASB3-202ENST00000394717 1734 ntTSL 2 BASIC13.09□□□□□ -0.31
TRAF3IP2O43734 STX1A-203ENST00000395155 783 ntTSL 2 BASIC13.09□□□□□ -0.31
TRAF3IP2O43734 AGPAT1-205ENST00000395497 2168 ntAPPRIS P1 TSL 5 BASIC13.09□□□□□ -0.31
TRAF3IP2O43734 SPEG-202ENST00000396686 1086 ntTSL 3 BASIC13.09□□□□□ -0.31
TRAF3IP2O43734 ATP6V1E1-202ENST00000399796 1208 ntTSL 2 BASIC13.09□□□□□ -0.31
TRAF3IP2O43734 HLA-V-201ENST00000429037 534 ntBASIC13.09□□□□□ -0.31
TRAF3IP2O43734 CSF2RBP1-201ENST00000447905 391 ntBASIC13.09□□□□□ -0.31
TRAF3IP2O43734 AL035414.1-201ENST00000451327 857 ntBASIC13.09□□□□□ -0.31
TRAF3IP2O43734 AL023775.1-201ENST00000454907 1746 ntBASIC13.09□□□□□ -0.31
TRAF3IP2O43734 STAG3L5P-205ENST00000473757 1255 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
TRAF3IP2O43734 LCN10-203ENST00000474369 564 ntAPPRIS ALT2 TSL 1 (best) BASIC13.09□□□□□ -0.31
TRAF3IP2O43734 AC090099.4-201ENST00000527671 1027 ntTSL 5 BASIC13.09□□□□□ -0.31
TRAF3IP2O43734 CACNA2D4-208ENST00000538027 952 ntTSL 5 BASIC13.09□□□□□ -0.31
TRAF3IP2O43734 AC021054.1-202ENST00000543884 599 ntTSL 3 BASIC13.09□□□□□ -0.31
TRAF3IP2O43734 AF111169.4-201ENST00000556368 749 ntTSL 2 BASIC13.09□□□□□ -0.31
TRAF3IP2O43734 SORD2P-201ENST00000558556 1069 ntBASIC13.09□□□□□ -0.31
TRAF3IP2O43734 SLC13A5-208ENST00000573648 1723 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
TRAF3IP2O43734 LINC00667-206ENST00000582363 2935 ntTSL 2 BASIC13.09□□□□□ -0.31
TRAF3IP2O43734 AC011447.3-204ENST00000585498 883 ntTSL 2 BASIC13.09□□□□□ -0.31
TRAF3IP2O43734 TJP3-207ENST00000589378 3068 ntAPPRIS ALT2 TSL 2 BASIC13.09□□□□□ -0.31
TRAF3IP2O43734 CEP295NL-205ENST00000619342 1866 ntTSL 5 BASIC13.09□□□□□ -0.31
TRAF3IP2O43734 AC027601.3-201ENST00000622907 509 ntBASIC13.09□□□□□ -0.31
TRAF3IP2O43734 AC009093.10-201ENST00000641956 1442 ntBASIC13.09□□□□□ -0.31
TRAF3IP2O43734 WARS2-202ENST00000369426 2811 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
TRAF3IP2O43734 RNF123-202ENST00000432042 2670 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
TRAF3IP2O43734 PRKAG2-215ENST00000492843 2699 ntTSL 5 BASIC13.09□□□□□ -0.31
TRAF3IP2O43734 CYP1A1-210ENST00000617691 2521 ntTSL 5 BASIC13.09□□□□□ -0.31
TRAF3IP2O43734 HTR3A-206ENST00000506841 2221 ntTSL 2 BASIC13.09□□□□□ -0.31
TRAF3IP2O43734 PWWP2A-201ENST00000307063 3346 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
TRAF3IP2O43734 CACNA2D4-220ENST00000585732 2566 ntTSL 5 BASIC13.09□□□□□ -0.31
TRAF3IP2O43734 GDI2-203ENST00000380191 2412 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
TRAF3IP2O43734 FAM160A2-202ENST00000449352 3354 ntAPPRIS ALT1 TSL 1 (best) BASIC13.09□□□□□ -0.31
TRAF3IP2O43734 FAM214B-202ENST00000378557 3070 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
TRAF3IP2O43734 GTF2I-212ENST00000573035 4548 ntAPPRIS P4 TSL 1 (best) BASIC13.09□□□□□ -0.31
TRAF3IP2O43734 TPCN1-214ENST00000550785 5345 ntTSL 2 BASIC13.09□□□□□ -0.31
TRAF3IP2O43734 REM1-201ENST00000201979 1665 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.31
TRAF3IP2O43734 AC012617.1-204ENST00000586340 2305 ntBASIC13.08□□□□□ -0.31
TRAF3IP2O43734 LINC00658-202ENST00000420529 1542 ntTSL 1 (best) BASIC13.08□□□□□ -0.31
TRAF3IP2O43734 LCMT1-203ENST00000399069 1368 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.31
TRAF3IP2O43734 AC011498.7-201ENST00000624986 2027 ntBASIC13.08□□□□□ -0.31
TRAF3IP2O43734 RUNDC1-201ENST00000361677 3828 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
TRAF3IP2O43734 CXCL12-201ENST00000343575 1857 ntAPPRIS P3 TSL 1 (best) BASIC13.08□□□□□ -0.32
TRAF3IP2O43734 PRPSAP2-216ENST00000536323 1872 ntTSL 2 BASIC13.08□□□□□ -0.32
TRAF3IP2O43734 HTR7-203ENST00000371719 3033 ntAPPRIS ALT1 TSL 1 (best) BASIC13.08□□□□□ -0.32
TRAF3IP2O43734 PCDHB14-201ENST00000239449 4828 ntAPPRIS P1 BASIC13.08□□□□□ -0.32
TRAF3IP2O43734 DOK1-202ENST00000340004 1722 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
TRAF3IP2O43734 CCDC32-201ENST00000358005 1704 ntAPPRIS P1 TSL 2 BASIC13.08□□□□□ -0.32
TRAF3IP2O43734 UBASH3A-203ENST00000398367 1733 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
TRAF3IP2O43734 ZNF785-202ENST00000470110 2867 ntAPPRIS ALT2 TSL 2 BASIC13.08□□□□□ -0.32
TRAF3IP2O43734 CASP2-207ENST00000619992 4006 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
TRAF3IP2O43734 SPEG-205ENST00000396698 3379 ntTSL 5 BASIC13.08□□□□□ -0.32
TRAF3IP2O43734 PAPPA-201ENST00000328252 10959 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
TRAF3IP2O43734 PUS1-202ENST00000376649 4094 ntAPPRIS P3 TSL 1 (best) BASIC13.08□□□□□ -0.32
TRAF3IP2O43734 CEP76-201ENST00000262127 2939 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
TRAF3IP2O43734 LMX1B-202ENST00000373474 5797 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
TRAF3IP2O43734 PTOV1-214ENST00000600603 1443 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
TRAF3IP2O43734 USP19-205ENST00000398898 4474 ntAPPRIS ALT2 TSL 5 BASIC13.08□□□□□ -0.32
TRAF3IP2O43734 EBP-205ENST00000495186 1775 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
TRAF3IP2O43734 OR8S1-201ENST00000310194 1080 ntBASIC13.08□□□□□ -0.32
TRAF3IP2O43734 CLRN1-203ENST00000328863 738 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
TRAF3IP2O43734 LAMTOR4-201ENST00000341942 605 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
TRAF3IP2O43734 SPDYE7P-201ENST00000355920 1064 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
TRAF3IP2O43734 FGF14-202ENST00000376143 744 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
TRAF3IP2O43734 VCX3B-201ENST00000381029 756 ntAPPRIS ALT2 TSL 5 BASIC13.08□□□□□ -0.32
TRAF3IP2O43734 R3HDM2P2-201ENST00000401880 2116 ntBASIC13.08□□□□□ -0.32
Retrieved 100 of 98,524 protein–RNA pairs in 49.6 ms