Protein–RNA interactions for Protein: Q9Y6M4

CSNK1G3, Casein kinase I isoform gamma-3, humanhuman

Predictions only

Length 447 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1G3Q9Y6M4 AC006122.1-201ENST00000493323 440 ntBASIC14.39□□□□□ -0.11
CSNK1G3Q9Y6M4 AC105362.1-201ENST00000511234 564 ntTSL 3 BASIC14.39□□□□□ -0.11
CSNK1G3Q9Y6M4 GATD1-205ENST00000524550 995 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
CSNK1G3Q9Y6M4 MSRB3-206ENST00000535664 964 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
CSNK1G3Q9Y6M4 RTN3P1-201ENST00000536295 711 ntBASIC14.39□□□□□ -0.11
CSNK1G3Q9Y6M4 CROCCP3-204ENST00000590118 574 ntTSL 4 BASIC14.39□□□□□ -0.11
CSNK1G3Q9Y6M4 AC011498.6-201ENST00000592034 510 ntTSL 5 BASIC14.39□□□□□ -0.11
CSNK1G3Q9Y6M4 AC005901.1-201ENST00000592766 552 ntTSL 4 BASIC14.39□□□□□ -0.11
CSNK1G3Q9Y6M4 FAM236A-201ENST00000593662 453 ntAPPRIS ALT2 TSL 2 BASIC14.39□□□□□ -0.11
CSNK1G3Q9Y6M4 FAM236B-201ENST00000596535 465 ntAPPRIS P1 TSL 2 BASIC14.39□□□□□ -0.11
CSNK1G3Q9Y6M4 AC012044.1-201ENST00000603431 297 ntBASIC14.39□□□□□ -0.11
CSNK1G3Q9Y6M4 AC133540.1-201ENST00000620845 1019 ntBASIC14.39□□□□□ -0.11
CSNK1G3Q9Y6M4 CYB561D1-201ENST00000310611 5009 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
CSNK1G3Q9Y6M4 PAK1-210ENST00000528203 1878 ntTSL 2 BASIC14.39□□□□□ -0.11
CSNK1G3Q9Y6M4 ARMC6-206ENST00000535612 2488 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
CSNK1G3Q9Y6M4 CKMT1B-201ENST00000300283 1779 ntAPPRIS P1 TSL 5 BASIC14.39□□□□□ -0.11
CSNK1G3Q9Y6M4 CKMT1A-204ENST00000434505 1779 ntAPPRIS P1 TSL 5 BASIC14.39□□□□□ -0.11
CSNK1G3Q9Y6M4 ARVCF-202ENST00000401994 2700 ntTSL 5 BASIC14.39□□□□□ -0.11
CSNK1G3Q9Y6M4 THAP10-201ENST00000249861 2399 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
CSNK1G3Q9Y6M4 ACSF2-202ENST00000427954 2251 ntTSL 2 BASIC14.39□□□□□ -0.11
CSNK1G3Q9Y6M4 AC005885.1-204ENST00000637885 2885 ntAPPRIS P1 TSL 5 BASIC14.39□□□□□ -0.11
CSNK1G3Q9Y6M4 MROH1-201ENST00000326134 5183 ntAPPRIS P3 TSL 5 BASIC14.39□□□□□ -0.11
CSNK1G3Q9Y6M4 HMBS-216ENST00000543090 1347 ntTSL 5 BASIC14.39□□□□□ -0.11
CSNK1G3Q9Y6M4 SPEG-205ENST00000396698 3379 ntTSL 5 BASIC14.39□□□□□ -0.11
CSNK1G3Q9Y6M4 AC136759.1-202ENST00000530858 2194 ntBASIC14.39□□□□□ -0.11
CSNK1G3Q9Y6M4 SLC52A3-201ENST00000217254 2654 ntAPPRIS P1 TSL 5 BASIC14.38□□□□□ -0.11
CSNK1G3Q9Y6M4 CEP70-213ENST00000489254 1811 ntAPPRIS ALT2 TSL 2 BASIC14.38□□□□□ -0.11
CSNK1G3Q9Y6M4 AC007292.2-201ENST00000593524 1812 ntBASIC14.38□□□□□ -0.11
CSNK1G3Q9Y6M4 PMP22-209ENST00000612492 1822 ntAPPRIS P1 TSL 3 BASIC14.38□□□□□ -0.11
CSNK1G3Q9Y6M4 FKBP5-201ENST00000357266 3772 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
CSNK1G3Q9Y6M4 BET1L-201ENST00000325147 2916 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
CSNK1G3Q9Y6M4 MAPT-204ENST00000344290 6816 ntAPPRIS ALT2 TSL 1 (best) BASIC14.38□□□□□ -0.11
CSNK1G3Q9Y6M4 COL5A1-201ENST00000371817 8471 ntAPPRIS P3 TSL 1 (best) BASIC14.38□□□□□ -0.11
CSNK1G3Q9Y6M4 NR1H3-203ENST00000405853 1480 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
CSNK1G3Q9Y6M4 GRK6P1-201ENST00000400595 1711 ntBASIC14.38□□□□□ -0.11
CSNK1G3Q9Y6M4 SLC13A5-208ENST00000573648 1723 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
CSNK1G3Q9Y6M4 CSRP1-201ENST00000340006 1952 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
CSNK1G3Q9Y6M4 ZFHX2-205ENST00000615307 1972 ntTSL 2 BASIC14.38□□□□□ -0.11
CSNK1G3Q9Y6M4 HCK-209ENST00000538448 2215 ntAPPRIS ALT2 TSL 2 BASIC14.38□□□□□ -0.11
CSNK1G3Q9Y6M4 ASIC4-202ENST00000358078 2741 ntAPPRIS ALT2 TSL 5 BASIC14.38□□□□□ -0.11
CSNK1G3Q9Y6M4 FOXO4-201ENST00000341558 1353 ntTSL 5 BASIC14.38□□□□□ -0.11
CSNK1G3Q9Y6M4 CHIA-204ENST00000369740 1625 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
CSNK1G3Q9Y6M4 NCK2-203ENST00000393349 2371 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
CSNK1G3Q9Y6M4 TOB1-AS1-201ENST00000416263 1351 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
CSNK1G3Q9Y6M4 BRMS1-202ENST00000425825 1363 ntTSL 5 BASIC14.38□□□□□ -0.11
CSNK1G3Q9Y6M4 LINC02405-201ENST00000512624 1361 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
CSNK1G3Q9Y6M4 MAGEA8-204ENST00000535454 2112 ntAPPRIS P1 TSL 3 BASIC14.38□□□□□ -0.11
CSNK1G3Q9Y6M4 NHS-201ENST00000380060 8761 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
CSNK1G3Q9Y6M4 TTC13-201ENST00000366661 3253 ntAPPRIS P3 TSL 1 (best) BASIC14.38□□□□□ -0.11
CSNK1G3Q9Y6M4 HEMK1-201ENST00000232854 6087 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
CSNK1G3Q9Y6M4 TNFSF13-202ENST00000349228 2036 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
CSNK1G3Q9Y6M4 B9D1-202ENST00000268841 755 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
CSNK1G3Q9Y6M4 AC091046.1-201ENST00000331871 207 ntBASIC14.38□□□□□ -0.11
CSNK1G3Q9Y6M4 ALKBH2-201ENST00000343075 1030 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
CSNK1G3Q9Y6M4 TOMM7-201ENST00000358435 778 ntAPPRIS P2 TSL 1 (best) BASIC14.38□□□□□ -0.11
CSNK1G3Q9Y6M4 COL5A1-AS1-201ENST00000371813 336 ntTSL 2 BASIC14.38□□□□□ -0.11
CSNK1G3Q9Y6M4 MIR33B-201ENST00000385104 96 ntBASIC14.38□□□□□ -0.11
CSNK1G3Q9Y6M4 LINC00431-201ENST00000440735 1189 ntTSL 5 BASIC14.38□□□□□ -0.11
CSNK1G3Q9Y6M4 AP000696.1-201ENST00000457669 1133 ntTSL 3 BASIC14.38□□□□□ -0.11
CSNK1G3Q9Y6M4 AC010973.2-201ENST00000485974 1230 ntTSL 2 BASIC14.38□□□□□ -0.11
CSNK1G3Q9Y6M4 AC116345.2-201ENST00000512837 523 ntBASIC14.38□□□□□ -0.11
CSNK1G3Q9Y6M4 SPCS2P2-201ENST00000603270 608 ntBASIC14.38□□□□□ -0.11
CSNK1G3Q9Y6M4 MUC1-226ENST00000614519 1093 ntTSL 2 BASIC14.38□□□□□ -0.11
CSNK1G3Q9Y6M4 STAT5A-211ENST00000590949 3318 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
CSNK1G3Q9Y6M4 BUD13-201ENST00000260210 2196 ntAPPRIS P3 TSL 1 (best) BASIC14.38□□□□□ -0.11
CSNK1G3Q9Y6M4 OPA1-208ENST00000392438 6340 ntAPPRIS ALT1 TSL 1 (best) BASIC14.38□□□□□ -0.11
CSNK1G3Q9Y6M4 UPF3B-202ENST00000345865 2335 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
CSNK1G3Q9Y6M4 FRMD5-209ENST00000484674 2319 ntTSL 2 BASIC14.38□□□□□ -0.11
CSNK1G3Q9Y6M4 PKN1-202ENST00000342216 2960 ntTSL 2 BASIC14.38□□□□□ -0.11
CSNK1G3Q9Y6M4 NELFE-201ENST00000375425 1405 ntAPPRIS ALT2 TSL 2 BASIC14.38□□□□□ -0.11
CSNK1G3Q9Y6M4 SGCE-204ENST00000428696 1409 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
CSNK1G3Q9Y6M4 RIMS1-216ENST00000521978 5079 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
CSNK1G3Q9Y6M4 KLHL26-201ENST00000300976 4407 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
CSNK1G3Q9Y6M4 CRHR2-208ENST00000506074 3109 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
CSNK1G3Q9Y6M4 AKR1A1-202ENST00000372070 1818 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
CSNK1G3Q9Y6M4 SMYD1-203ENST00000444564 1816 ntTSL 5 BASIC14.38□□□□□ -0.11
CSNK1G3Q9Y6M4 RNF135-202ENST00000328381 2892 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
CSNK1G3Q9Y6M4 FBXO5-202ENST00000367241 2221 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
CSNK1G3Q9Y6M4 RAI2-204ENST00000451717 2224 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
CSNK1G3Q9Y6M4 SMARCE1-205ENST00000431889 1569 ntTSL 2 BASIC14.38□□□□□ -0.11
CSNK1G3Q9Y6M4 ANKRD50-202ENST00000515641 4212 ntTSL 2 BASIC14.38□□□□□ -0.11
CSNK1G3Q9Y6M4 DIABLO-201ENST00000267169 1316 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
CSNK1G3Q9Y6M4 POU5F1-204ENST00000471529 1723 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
CSNK1G3Q9Y6M4 MSR1-201ENST00000262101 2132 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
CSNK1G3Q9Y6M4 UCN2-201ENST00000273610 1481 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
CSNK1G3Q9Y6M4 CERS3-202ENST00000394113 2045 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
CSNK1G3Q9Y6M4 SEMA3B-212ENST00000616701 2958 ntAPPRIS P3 TSL 1 (best) BASIC14.37□□□□□ -0.11
CSNK1G3Q9Y6M4 NTM-205ENST00000425719 1607 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
CSNK1G3Q9Y6M4 GLIDR-202ENST00000625350 2588 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
CSNK1G3Q9Y6M4 MIR600HG-201ENST00000449175 5984 ntBASIC14.37□□□□□ -0.11
CSNK1G3Q9Y6M4 MAPK7-202ENST00000308406 3149 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
CSNK1G3Q9Y6M4 GCKR-201ENST00000264717 2186 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
CSNK1G3Q9Y6M4 KCNJ18-201ENST00000567955 2196 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
CSNK1G3Q9Y6M4 ALAS2-202ENST00000335854 1795 ntTSL 2 BASIC14.37□□□□□ -0.11
CSNK1G3Q9Y6M4 DDHD2-205ENST00000520272 4532 ntAPPRIS P1 TSL 2 BASIC14.37□□□□□ -0.11
CSNK1G3Q9Y6M4 RALYL-207ENST00000521695 1924 ntAPPRIS ALT2 TSL 2 BASIC14.37□□□□□ -0.11
CSNK1G3Q9Y6M4 WDR97-201ENST00000323662 6916 ntAPPRIS P1 TSL 5 BASIC14.37□□□□□ -0.11
CSNK1G3Q9Y6M4 TRPV4-201ENST00000261740 3233 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
CSNK1G3Q9Y6M4 SLC2A11-203ENST00000345044 3219 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
CSNK1G3Q9Y6M4 APAF1-203ENST00000359972 7029 ntAPPRIS ALT1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Retrieved 100 of 98,524 protein–RNA pairs in 66.3 ms