Protein–RNA interactions for Protein: Q9Y2W7

KCNIP3, Calsenilin, humanhuman

Predictions only

Length 256 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KCNIP3Q9Y2W7 MYT1-201ENST00000328439 5535 ntAPPRIS P2 TSL 1 (best) BASIC12.38□□□□□ -0.43
KCNIP3Q9Y2W7 MAP7-201ENST00000354570 4152 ntAPPRIS P3 TSL 1 (best) BASIC12.38□□□□□ -0.43
KCNIP3Q9Y2W7 HMBOX1-210ENST00000523613 1730 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
KCNIP3Q9Y2W7 BUD31-201ENST00000222969 1035 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
KCNIP3Q9Y2W7 POP7-201ENST00000303151 927 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
KCNIP3Q9Y2W7 MOB1B-202ENST00000396051 1107 ntTSL 2 BASIC12.38□□□□□ -0.43
KCNIP3Q9Y2W7 AP1S3-204ENST00000409375 552 ntTSL 3 BASIC12.38□□□□□ -0.43
KCNIP3Q9Y2W7 CAPG-205ENST00000409921 1195 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
KCNIP3Q9Y2W7 MCCD1P2-201ENST00000423228 335 ntBASIC12.38□□□□□ -0.43
KCNIP3Q9Y2W7 AL450487.1-201ENST00000426799 995 ntBASIC12.38□□□□□ -0.43
KCNIP3Q9Y2W7 AL669970.3-201ENST00000435284 428 ntTSL 3 BASIC12.38□□□□□ -0.43
KCNIP3Q9Y2W7 AKIRIN1-203ENST00000446189 1243 ntTSL 2 BASIC12.38□□□□□ -0.43
KCNIP3Q9Y2W7 SEC24B-AS1-201ENST00000499359 957 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
KCNIP3Q9Y2W7 SEC24B-AS1-204ENST00000510971 554 ntTSL 4 BASIC12.38□□□□□ -0.43
KCNIP3Q9Y2W7 AC105202.1-202ENST00000522060 834 ntTSL 3 BASIC12.38□□□□□ -0.43
KCNIP3Q9Y2W7 AC090735.1-201ENST00000523881 488 ntTSL 4 BASIC12.38□□□□□ -0.43
KCNIP3Q9Y2W7 RAB30-AS1-202ENST00000526795 567 ntTSL 5 BASIC12.38□□□□□ -0.43
KCNIP3Q9Y2W7 TRMT112-203ENST00000535750 823 ntTSL 2 BASIC12.38□□□□□ -0.43
KCNIP3Q9Y2W7 RHBDL2-203ENST00000540558 697 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
KCNIP3Q9Y2W7 AC007569.1-201ENST00000550306 600 ntTSL 3 BASIC12.38□□□□□ -0.43
KCNIP3Q9Y2W7 AL928654.4-206ENST00000551180 980 ntAPPRIS ALT2 TSL 5 BASIC12.38□□□□□ -0.43
KCNIP3Q9Y2W7 PAX9-204ENST00000554201 1289 ntTSL 2 BASIC12.38□□□□□ -0.43
KCNIP3Q9Y2W7 AC087612.1-201ENST00000560238 658 ntTSL 5 BASIC12.38□□□□□ -0.43
KCNIP3Q9Y2W7 SECTM1-202ENST00000580437 1030 ntAPPRIS ALT2 TSL 2 BASIC12.38□□□□□ -0.43
KCNIP3Q9Y2W7 RPS15-202ENST00000585665 467 ntTSL 3 BASIC12.38□□□□□ -0.43
KCNIP3Q9Y2W7 AC008738.3-201ENST00000589932 659 ntTSL 2 BASIC12.38□□□□□ -0.43
KCNIP3Q9Y2W7 AC092506.1-204ENST00000634888 1066 ntTSL 5 BASIC12.38□□□□□ -0.43
KCNIP3Q9Y2W7 CHD1L-211ENST00000639534 1144 ntTSL 5 BASIC12.38□□□□□ -0.43
KCNIP3Q9Y2W7 PI4KB-203ENST00000368874 3934 ntAPPRIS ALT1 TSL 1 (best) BASIC12.38□□□□□ -0.43
KCNIP3Q9Y2W7 SLCO2B1-203ENST00000428359 2368 ntAPPRIS ALT2 TSL 1 (best) BASIC12.38□□□□□ -0.43
KCNIP3Q9Y2W7 TMEM131L-203ENST00000409959 5017 ntAPPRIS ALT2 TSL 5 BASIC12.38□□□□□ -0.43
KCNIP3Q9Y2W7 FAM155B-201ENST00000252338 4013 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
KCNIP3Q9Y2W7 UBAP1L-201ENST00000502113 1381 ntAPPRIS P1 TSL 5 BASIC12.38□□□□□ -0.43
KCNIP3Q9Y2W7 MTMR3-201ENST00000323630 5866 ntTSL 5 BASIC12.38□□□□□ -0.43
KCNIP3Q9Y2W7 ALDH1A3-202ENST00000346623 3104 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
KCNIP3Q9Y2W7 ITPRIP-201ENST00000278071 6807 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
KCNIP3Q9Y2W7 TSEN2-202ENST00000402228 2149 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
KCNIP3Q9Y2W7 DHX38-201ENST00000268482 4608 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
KCNIP3Q9Y2W7 GPER1-203ENST00000397092 2971 ntAPPRIS P1 TSL 2 BASIC12.38□□□□□ -0.43
KCNIP3Q9Y2W7 PLCD1-204ENST00000463876 2963 ntAPPRIS ALT1 TSL 2 BASIC12.38□□□□□ -0.43
KCNIP3Q9Y2W7 OTUD6A-201ENST00000338352 1689 ntAPPRIS P1 BASIC12.38□□□□□ -0.43
KCNIP3Q9Y2W7 DDX54-202ENST00000314045 4380 ntAPPRIS ALT2 TSL 1 (best) BASIC12.38□□□□□ -0.43
KCNIP3Q9Y2W7 KRT32-201ENST00000225899 1750 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
KCNIP3Q9Y2W7 RBBP4-204ENST00000414241 1788 ntAPPRIS ALT1 TSL 1 (best) BASIC12.38□□□□□ -0.43
KCNIP3Q9Y2W7 AL590644.1-201ENST00000412427 4676 ntTSL 4 BASIC12.38□□□□□ -0.43
KCNIP3Q9Y2W7 RARG-202ENST00000394426 2640 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
KCNIP3Q9Y2W7 AL591122.2-201ENST00000624125 1853 ntBASIC12.38□□□□□ -0.43
KCNIP3Q9Y2W7 CYP26B1-205ENST00000546307 4331 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
KCNIP3Q9Y2W7 TP53I11-222ENST00000616990 3567 ntAPPRIS P1 TSL 2 BASIC12.38□□□□□ -0.43
KCNIP3Q9Y2W7 CNTNAP5-202ENST00000431078 5284 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
KCNIP3Q9Y2W7 HYOU1-220ENST00000617285 4529 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
KCNIP3Q9Y2W7 TM9SF1-202ENST00000396854 2055 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
KCNIP3Q9Y2W7 LIG1-202ENST00000427526 3027 ntAPPRIS ALT2 TSL 2 BASIC12.37□□□□□ -0.43
KCNIP3Q9Y2W7 TOE1-201ENST00000372090 2389 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
KCNIP3Q9Y2W7 MATN3-202ENST00000421259 1443 ntAPPRIS ALT2 TSL 1 (best) BASIC12.37□□□□□ -0.43
KCNIP3Q9Y2W7 HSD17B4-215ENST00000510025 2589 ntTSL 2 BASIC12.37□□□□□ -0.43
KCNIP3Q9Y2W7 ABCB8-212ENST00000477719 1625 ntTSL 5 BASIC12.37□□□□□ -0.43
KCNIP3Q9Y2W7 DMAP1-203ENST00000372289 1730 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
KCNIP3Q9Y2W7 PLTP-203ENST00000372431 1743 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
KCNIP3Q9Y2W7 RPS27L-201ENST00000330964 6434 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
KCNIP3Q9Y2W7 AC215219.1-201ENST00000400706 1817 ntBASIC12.37□□□□□ -0.43
KCNIP3Q9Y2W7 RNF157-AS1-204ENST00000590137 1812 ntTSL 2 BASIC12.37□□□□□ -0.43
KCNIP3Q9Y2W7 FGF12-207ENST00000454309 3058 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
KCNIP3Q9Y2W7 MYADML-201ENST00000474610 2147 ntBASIC12.37□□□□□ -0.43
KCNIP3Q9Y2W7 USH1G-202ENST00000614341 3558 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
KCNIP3Q9Y2W7 PWWP2A-202ENST00000456329 3991 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
KCNIP3Q9Y2W7 CCDC18-203ENST00000401026 4552 ntAPPRIS ALT2 TSL 1 (best) BASIC12.37□□□□□ -0.43
KCNIP3Q9Y2W7 EBI3-201ENST00000221847 1186 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
KCNIP3Q9Y2W7 RPL18A-201ENST00000222247 665 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
KCNIP3Q9Y2W7 ZNF593-201ENST00000270812 698 ntTSL 2 BASIC12.37□□□□□ -0.43
KCNIP3Q9Y2W7 FKBP2-201ENST00000309366 657 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
KCNIP3Q9Y2W7 RPL21-203ENST00000319826 806 ntAPPRIS P1 TSL 2 BASIC12.37□□□□□ -0.43
KCNIP3Q9Y2W7 PRDX5-202ENST00000347941 463 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
KCNIP3Q9Y2W7 HSD17B10-203ENST00000375304 916 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
KCNIP3Q9Y2W7 SERF1B-202ENST00000380751 703 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
KCNIP3Q9Y2W7 ASMT-201ENST00000381229 1087 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
KCNIP3Q9Y2W7 UBE2C-206ENST00000405520 641 ntTSL 2 BASIC12.37□□□□□ -0.43
KCNIP3Q9Y2W7 FBLN7-204ENST00000409667 1124 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
KCNIP3Q9Y2W7 RAB17-204ENST00000409822 1077 ntTSL 5 BASIC12.37□□□□□ -0.43
KCNIP3Q9Y2W7 AC023274.1-201ENST00000418278 595 ntBASIC12.37□□□□□ -0.43
KCNIP3Q9Y2W7 RBPMS2P1-201ENST00000437762 623 ntBASIC12.37□□□□□ -0.43
KCNIP3Q9Y2W7 AL691459.1-201ENST00000438589 407 ntTSL 3 BASIC12.37□□□□□ -0.43
KCNIP3Q9Y2W7 PTPRG-AS1-205ENST00000475371 733 ntTSL 3 BASIC12.37□□□□□ -0.43
KCNIP3Q9Y2W7 AC100818.1-201ENST00000524167 563 ntTSL 4 BASIC12.37□□□□□ -0.43
KCNIP3Q9Y2W7 TMEM41B-203ENST00000527813 803 ntTSL 5 BASIC12.37□□□□□ -0.43
KCNIP3Q9Y2W7 ZNF576-206ENST00000533118 867 ntAPPRIS P1 TSL 2 BASIC12.37□□□□□ -0.43
KCNIP3Q9Y2W7 BCAT2-203ENST00000545387 1272 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
KCNIP3Q9Y2W7 OIP5-AS1-209ENST00000561226 775 ntTSL 3 BASIC12.37□□□□□ -0.43
KCNIP3Q9Y2W7 TVP23B-206ENST00000574226 1080 ntAPPRIS ALT1 TSL 1 (best) BASIC12.37□□□□□ -0.43
KCNIP3Q9Y2W7 AC138207.8-201ENST00000579692 739 ntTSL 3 BASIC12.37□□□□□ -0.43
KCNIP3Q9Y2W7 C1QTNF1-212ENST00000583904 1129 ntAPPRIS P1 TSL 4 BASIC12.37□□□□□ -0.43
KCNIP3Q9Y2W7 LINC01115-203ENST00000606068 577 ntBASIC12.37□□□□□ -0.43
KCNIP3Q9Y2W7 UBE2C-208ENST00000617055 705 ntTSL 3 BASIC12.37□□□□□ -0.43
KCNIP3Q9Y2W7 LINC01002-214ENST00000632102 561 ntTSL 4 BASIC12.37□□□□□ -0.43
KCNIP3Q9Y2W7 AC105277.1-203ENST00000635492 1293 ntTSL 5 BASIC12.37□□□□□ -0.43
KCNIP3Q9Y2W7 PPIC-201ENST00000306442 1380 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
KCNIP3Q9Y2W7 C2-205ENST00000418949 1658 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
KCNIP3Q9Y2W7 TGFB1I1-201ENST00000361773 1773 ntAPPRIS P3 TSL 1 (best) BASIC12.37□□□□□ -0.43
KCNIP3Q9Y2W7 PATL2-201ENST00000434130 1950 ntAPPRIS P3 TSL 5 BASIC12.37□□□□□ -0.43
KCNIP3Q9Y2W7 PGAP2-201ENST00000278243 2062 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
Retrieved 100 of 98,524 protein–RNA pairs in 36.5 ms