Protein–RNA interactions for Protein: Q9Y2B5

VPS9D1, VPS9 domain-containing protein 1, humanhuman

Predictions only

Length 631 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS9D1Q9Y2B5 AL031429.1-201ENST00000426775 749 ntTSL 2 BASIC14.76□□□□□ -0.05
VPS9D1Q9Y2B5 LIMS3-201ENST00000437679 1220 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
VPS9D1Q9Y2B5 TTTY23B-201ENST00000442790 549 ntBASIC14.76□□□□□ -0.05
VPS9D1Q9Y2B5 DEFT1P-201ENST00000453425 496 ntBASIC14.76□□□□□ -0.05
VPS9D1Q9Y2B5 MTND2P39-201ENST00000457230 764 ntBASIC14.76□□□□□ -0.05
VPS9D1Q9Y2B5 HHEX-203ENST00000492654 808 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
VPS9D1Q9Y2B5 AC139713.2-206ENST00000499587 566 ntTSL 4 BASIC14.76□□□□□ -0.05
VPS9D1Q9Y2B5 AC106760.1-201ENST00000508690 800 ntBASIC14.76□□□□□ -0.05
VPS9D1Q9Y2B5 PALLD-215ENST00000512127 2958 ntTSL 2 BASIC14.76□□□□□ -0.05
VPS9D1Q9Y2B5 ATP6V1C1-202ENST00000518738 2130 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
VPS9D1Q9Y2B5 AAMDC-206ENST00000526415 579 ntAPPRIS P1 TSL 2 BASIC14.76□□□□□ -0.05
VPS9D1Q9Y2B5 SLC25A47P1-201ENST00000531577 414 ntBASIC14.76□□□□□ -0.05
VPS9D1Q9Y2B5 SLC8B1-206ENST00000549069 1058 ntTSL 2 BASIC14.76□□□□□ -0.05
VPS9D1Q9Y2B5 RPL28-206ENST00000558752 671 ntTSL 3 BASIC14.76□□□□□ -0.05
VPS9D1Q9Y2B5 APRT-204ENST00000563655 709 ntTSL 5 BASIC14.76□□□□□ -0.05
VPS9D1Q9Y2B5 SPECC1-223ENST00000584527 940 ntTSL 3 BASIC14.76□□□□□ -0.05
VPS9D1Q9Y2B5 C17orf62-239ENST00000585080 741 ntAPPRIS P1 TSL 5 BASIC14.76□□□□□ -0.05
VPS9D1Q9Y2B5 AC004637.1-201ENST00000586675 482 ntTSL 3 BASIC14.76□□□□□ -0.05
VPS9D1Q9Y2B5 AC005597.1-201ENST00000588092 420 ntTSL 3 BASIC14.76□□□□□ -0.05
VPS9D1Q9Y2B5 ANGPTL8-203ENST00000591200 504 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
VPS9D1Q9Y2B5 MARCH2-206ENST00000601283 747 ntTSL 3 BASIC14.76□□□□□ -0.05
VPS9D1Q9Y2B5 ANGPTL8-204ENST00000616433 1223 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
VPS9D1Q9Y2B5 UCHL3-206ENST00000618773 1050 ntTSL 5 BASIC14.76□□□□□ -0.05
VPS9D1Q9Y2B5 ACAN-202ENST00000439576 8840 ntAPPRIS P2 TSL 5 BASIC14.76□□□□□ -0.05
VPS9D1Q9Y2B5 ASB10-204ENST00000420175 1694 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
VPS9D1Q9Y2B5 SLC8B1-202ENST00000546737 1656 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
VPS9D1Q9Y2B5 PCDHA7-201ENST00000356878 2922 ntAPPRIS ALT2 BASIC14.76□□□□□ -0.05
VPS9D1Q9Y2B5 AC055854.1-203ENST00000521141 1630 ntTSL 5 BASIC14.76□□□□□ -0.05
VPS9D1Q9Y2B5 TP73-213ENST00000604479 1623 ntTSL 5 BASIC14.76□□□□□ -0.05
VPS9D1Q9Y2B5 CERS3-202ENST00000394113 2045 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
VPS9D1Q9Y2B5 CTBP1-AS2-205ENST00000578730 2757 ntTSL 2 BASIC14.76□□□□□ -0.05
VPS9D1Q9Y2B5 ANKMY1-210ENST00000406958 2396 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
VPS9D1Q9Y2B5 HSDL1-201ENST00000219439 3519 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
VPS9D1Q9Y2B5 MSL2-201ENST00000309993 4692 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
VPS9D1Q9Y2B5 GLT1D1-201ENST00000281703 2725 ntTSL 2 BASIC14.76□□□□□ -0.05
VPS9D1Q9Y2B5 MBD6-201ENST00000355673 4282 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
VPS9D1Q9Y2B5 ARMCX6-208ENST00000539247 1928 ntAPPRIS P1 TSL 4 BASIC14.76□□□□□ -0.05
VPS9D1Q9Y2B5 DBR1-201ENST00000260803 2666 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
VPS9D1Q9Y2B5 PRR19-201ENST00000341747 1530 ntAPPRIS P2 TSL 5 BASIC14.76□□□□□ -0.05
VPS9D1Q9Y2B5 POLR1E-202ENST00000377798 1868 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
VPS9D1Q9Y2B5 ZNF570-201ENST00000330173 5559 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
VPS9D1Q9Y2B5 CDK2AP1-205ENST00000542174 1812 ntTSL 2 BASIC14.76□□□□□ -0.05
VPS9D1Q9Y2B5 TMPRSS6-202ENST00000381792 3260 ntAPPRIS ALT2 TSL 5 BASIC14.76□□□□□ -0.05
VPS9D1Q9Y2B5 FYN-202ENST00000354650 3628 ntAPPRIS P4 TSL 1 (best) BASIC14.75□□□□□ -0.05
VPS9D1Q9Y2B5 KDM5B-202ENST00000367264 6449 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
VPS9D1Q9Y2B5 LRRC34-208ENST00000522830 1781 ntAPPRIS ALT2 TSL 5 BASIC14.75□□□□□ -0.05
VPS9D1Q9Y2B5 ACE-201ENST00000290863 2479 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
VPS9D1Q9Y2B5 CLCNKA-201ENST00000331433 2475 ntAPPRIS P3 TSL 1 (best) BASIC14.75□□□□□ -0.05
VPS9D1Q9Y2B5 FECH-201ENST00000262093 3853 ntAPPRIS P3 TSL 1 (best) BASIC14.75□□□□□ -0.05
VPS9D1Q9Y2B5 LMNA-201ENST00000347559 3137 ntTSL 5 BASIC14.75□□□□□ -0.05
VPS9D1Q9Y2B5 OSBPL5-202ENST00000348039 2798 ntTSL 2 BASIC14.75□□□□□ -0.05
VPS9D1Q9Y2B5 HTR3A-205ENST00000504030 2432 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
VPS9D1Q9Y2B5 FAM180B-201ENST00000538490 1388 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
VPS9D1Q9Y2B5 RDX-218ENST00000544551 4117 ntTSL 2 BASIC14.75□□□□□ -0.05
VPS9D1Q9Y2B5 MKS1-202ENST00000393119 2397 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
VPS9D1Q9Y2B5 DHX36-213ENST00000496811 6733 ntAPPRIS P3 TSL 1 (best) BASIC14.75□□□□□ -0.05
VPS9D1Q9Y2B5 DLX6-202ENST00000518156 2304 ntAPPRIS P2 TSL 1 (best) BASIC14.75□□□□□ -0.05
VPS9D1Q9Y2B5 ANKRD30BP2-201ENST00000435744 1610 ntBASIC14.75□□□□□ -0.05
VPS9D1Q9Y2B5 OPCML-IT1-201ENST00000533859 2936 ntTSL 2 BASIC14.75□□□□□ -0.05
VPS9D1Q9Y2B5 CD79A-201ENST00000221972 1258 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
VPS9D1Q9Y2B5 PDE6D-201ENST00000287600 1175 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
VPS9D1Q9Y2B5 PRKN-201ENST00000338468 1276 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
VPS9D1Q9Y2B5 SFT2D1-201ENST00000361731 1079 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
VPS9D1Q9Y2B5 IGHV3-53-201ENST00000390627 571 ntAPPRIS P1 BASIC14.75□□□□□ -0.05
VPS9D1Q9Y2B5 AL121949.1-201ENST00000402043 968 ntBASIC14.75□□□□□ -0.05
VPS9D1Q9Y2B5 NGDN-202ENST00000408901 1143 ntAPPRIS ALT2 TSL 1 (best) BASIC14.75□□□□□ -0.05
VPS9D1Q9Y2B5 C17orf51-202ENST00000412778 877 ntAPPRIS ALT2 TSL 3 BASIC14.75□□□□□ -0.05
VPS9D1Q9Y2B5 C19orf24-202ENST00000469144 668 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
VPS9D1Q9Y2B5 AC093534.1-201ENST00000504977 132 ntBASIC14.75□□□□□ -0.05
VPS9D1Q9Y2B5 SLC25A30-AS1-201ENST00000506633 701 ntTSL 3 BASIC14.75□□□□□ -0.05
VPS9D1Q9Y2B5 LINC02242-201ENST00000507298 641 ntTSL 5 BASIC14.75□□□□□ -0.05
VPS9D1Q9Y2B5 MRNIP-212ENST00000520698 902 ntAPPRIS ALT2 TSL 2 BASIC14.75□□□□□ -0.05
VPS9D1Q9Y2B5 FUZ-207ENST00000526575 482 ntTSL 4 BASIC14.75□□□□□ -0.05
VPS9D1Q9Y2B5 ANAPC15-208ENST00000538393 867 ntAPPRIS P3 TSL 2 BASIC14.75□□□□□ -0.05
VPS9D1Q9Y2B5 AC012645.3-203ENST00000567153 520 ntTSL 2 BASIC14.75□□□□□ -0.05
VPS9D1Q9Y2B5 STRADA-221ENST00000582137 1238 ntTSL 2 BASIC14.75□□□□□ -0.05
VPS9D1Q9Y2B5 FXYD6-216ENST00000584230 566 ntAPPRIS ALT1 TSL 3 BASIC14.75□□□□□ -0.05
VPS9D1Q9Y2B5 ZNF790-AS1-204ENST00000589556 650 ntTSL 2 BASIC14.75□□□□□ -0.05
VPS9D1Q9Y2B5 AP001198.2-201ENST00000593121 466 ntTSL 2 BASIC14.75□□□□□ -0.05
VPS9D1Q9Y2B5 SCGB1C2-201ENST00000595228 478 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
VPS9D1Q9Y2B5 AC005162.3-202ENST00000609495 483 ntTSL 5 BASIC14.75□□□□□ -0.05
VPS9D1Q9Y2B5 Metazoa_SRP.80-201ENST00000619894 320 ntBASIC14.75□□□□□ -0.05
VPS9D1Q9Y2B5 ETV2-208ENST00000621247 941 ntTSL 5 BASIC14.75□□□□□ -0.05
VPS9D1Q9Y2B5 CSTB-201ENST00000291568 2164 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
VPS9D1Q9Y2B5 EXTL1-201ENST00000374280 4015 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
VPS9D1Q9Y2B5 VIPAS39-202ENST00000343765 2761 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
VPS9D1Q9Y2B5 FES-203ENST00000394302 2133 ntTSL 5 BASIC14.75□□□□□ -0.05
VPS9D1Q9Y2B5 FAM189A2-201ENST00000257515 2423 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
VPS9D1Q9Y2B5 INHBE-201ENST00000266646 2429 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
VPS9D1Q9Y2B5 PEX26-205ENST00000610387 3924 ntTSL 5 BASIC14.75□□□□□ -0.05
VPS9D1Q9Y2B5 ZC3HAV1-203ENST00000464606 4776 ntAPPRIS ALT2 TSL 5 BASIC14.75□□□□□ -0.05
VPS9D1Q9Y2B5 MCHR2-201ENST00000281806 2368 ntAPPRIS P1 TSL 2 BASIC14.75□□□□□ -0.05
VPS9D1Q9Y2B5 GCNT7-201ENST00000243913 2064 ntTSL 2 BASIC14.75□□□□□ -0.05
VPS9D1Q9Y2B5 AL365205.1-204ENST00000359201 2098 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
VPS9D1Q9Y2B5 PORCN-201ENST00000326194 1755 ntAPPRIS P4 TSL 1 (best) BASIC14.75□□□□□ -0.05
VPS9D1Q9Y2B5 GGT1-201ENST00000248923 2326 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
VPS9D1Q9Y2B5 MAGEA2-203ENST00000611557 2024 ntAPPRIS P1 TSL 5 BASIC14.75□□□□□ -0.05
VPS9D1Q9Y2B5 ZFAND6-222ENST00000613266 1729 ntAPPRIS P1 TSL 3 BASIC14.75□□□□□ -0.05
VPS9D1Q9Y2B5 DFNA5-201ENST00000342947 2590 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
VPS9D1Q9Y2B5 IRAK1-203ENST00000369980 3666 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Retrieved 100 of 98,524 protein–RNA pairs in 37.5 ms