Protein–RNA interactions for Protein: Q9UJ98

STAG3, Cohesin subunit SA-3, humanhuman

Predictions only

Length 1,225 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
STAG3Q9UJ98 AC245884.1-201ENST00000457113 529 ntTSL 3 BASIC20.88■□□□□ 0.93
STAG3Q9UJ98 SH3BGR-209ENST00000458295 812 ntTSL 3 BASIC20.88■□□□□ 0.93
STAG3Q9UJ98 CD164-210ENST00000512821 964 ntTSL 2 BASIC20.88■□□□□ 0.93
STAG3Q9UJ98 LINC01569-203ENST00000573268 694 ntTSL 3 BASIC20.88■□□□□ 0.93
STAG3Q9UJ98 AC055811.3-201ENST00000584952 686 ntBASIC20.88■□□□□ 0.93
STAG3Q9UJ98 SNRPA1-216ENST00000626000 539 ntTSL 5 BASIC20.88■□□□□ 0.93
STAG3Q9UJ98 PITPNB-202ENST00000335272 2926 ntAPPRIS P3 TSL 1 (best) BASIC20.88■□□□□ 0.93
STAG3Q9UJ98 ARHGEF28-202ENST00000296799 4424 ntAPPRIS ALT2 TSL 2 BASIC20.88■□□□□ 0.93
STAG3Q9UJ98 DNAJA3-201ENST00000262375 2763 ntAPPRIS P3 TSL 1 (best) BASIC20.88■□□□□ 0.93
STAG3Q9UJ98 LAD1-201ENST00000367313 2336 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
STAG3Q9UJ98 RECQL4-209ENST00000617875 3809 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
STAG3Q9UJ98 CDK11B-204ENST00000407249 2677 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
STAG3Q9UJ98 WFIKKN2-202ENST00000426127 2193 ntTSL 2 BASIC20.87■□□□□ 0.93
STAG3Q9UJ98 PNPLA5-204ENST00000593866 2197 ntTSL 2 BASIC20.87■□□□□ 0.93
STAG3Q9UJ98 USP35-203ENST00000529308 4216 ntAPPRIS P1 TSL 5 BASIC20.87■□□□□ 0.93
STAG3Q9UJ98 GIT2-220ENST00000553118 2424 ntTSL 5 BASIC20.87■□□□□ 0.93
STAG3Q9UJ98 TK2-207ENST00000544898 3441 ntAPPRIS P3 TSL 1 (best) BASIC20.87■□□□□ 0.93
STAG3Q9UJ98 TFAP2A-201ENST00000319516 2035 ntTSL 5 BASIC20.87■□□□□ 0.93
STAG3Q9UJ98 TLE3-202ENST00000440567 2657 ntTSL 2 BASIC20.87■□□□□ 0.93
STAG3Q9UJ98 MBD1-203ENST00000339998 2956 ntAPPRIS ALT2 TSL 1 (best) BASIC20.87■□□□□ 0.93
STAG3Q9UJ98 GUCD1-206ENST00000435822 3613 ntAPPRIS ALT1 TSL 1 (best) BASIC20.87■□□□□ 0.93
STAG3Q9UJ98 EPN1-203ENST00000411543 2621 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
STAG3Q9UJ98 IBA57-201ENST00000366711 7817 ntAPPRIS P1 TSL 2 BASIC20.87■□□□□ 0.93
STAG3Q9UJ98 HNRNPUL1-220ENST00000602130 2932 ntAPPRIS ALT2 TSL 1 (best) BASIC20.87■□□□□ 0.93
STAG3Q9UJ98 CCDC6-201ENST00000263102 5811 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
STAG3Q9UJ98 MEF2A-204ENST00000557785 2854 ntAPPRIS ALT1 TSL 5 BASIC20.87■□□□□ 0.93
STAG3Q9UJ98 SAT1-201ENST00000379251 801 ntTSL 2 BASIC20.87■□□□□ 0.93
STAG3Q9UJ98 SAT1-202ENST00000379253 909 ntTSL 2 BASIC20.87■□□□□ 0.93
STAG3Q9UJ98 SAT1-203ENST00000379254 868 ntTSL 3 BASIC20.87■□□□□ 0.93
STAG3Q9UJ98 SAT1-204ENST00000379270 1065 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
STAG3Q9UJ98 KLK11-203ENST00000391804 930 ntAPPRIS ALT2 TSL 5 BASIC20.87■□□□□ 0.93
STAG3Q9UJ98 GSTT2B-202ENST00000404172 819 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
STAG3Q9UJ98 AL109935.1-201ENST00000413249 473 ntTSL 3 BASIC20.87■□□□□ 0.93
STAG3Q9UJ98 AC034231.1-201ENST00000507251 537 ntTSL 4 BASIC20.87■□□□□ 0.93
STAG3Q9UJ98 LINC02472-201ENST00000512268 575 ntTSL 2 BASIC20.87■□□□□ 0.93
STAG3Q9UJ98 RNA5SP406-201ENST00000516106 112 ntBASIC20.87■□□□□ 0.93
STAG3Q9UJ98 AC226150.1-201ENST00000544259 466 ntBASIC20.87■□□□□ 0.93
STAG3Q9UJ98 AC124312.2-201ENST00000546615 427 ntTSL 3 BASIC20.87■□□□□ 0.93
STAG3Q9UJ98 AC134312.2-201ENST00000563521 608 ntTSL 2 BASIC20.87■□□□□ 0.93
STAG3Q9UJ98 AL118516.1-201ENST00000564152 670 ntBASIC20.87■□□□□ 0.93
STAG3Q9UJ98 AC020636.2-201ENST00000569170 1189 ntAPPRIS P5 TSL 1 (best) BASIC20.87■□□□□ 0.93
STAG3Q9UJ98 RN7SL665P-201ENST00000578793 300 ntBASIC20.87■□□□□ 0.93
STAG3Q9UJ98 RAB8A-201ENST00000300935 2827 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
STAG3Q9UJ98 TOB2-201ENST00000327492 4561 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
STAG3Q9UJ98 LINC00200-201ENST00000425630 2434 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
STAG3Q9UJ98 ZMIZ2-202ENST00000309315 5144 ntAPPRIS P4 TSL 2 BASIC20.87■□□□□ 0.93
STAG3Q9UJ98 PLPPR5-201ENST00000263177 3288 ntAPPRIS P4 TSL 1 (best) BASIC20.87■□□□□ 0.93
STAG3Q9UJ98 TBC1D1-219ENST00000615497 2383 ntTSL 2 BASIC20.87■□□□□ 0.93
STAG3Q9UJ98 RBM12-201ENST00000359646 5332 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
STAG3Q9UJ98 ARMCX6-207ENST00000538627 1758 ntAPPRIS P1 TSL 2 BASIC20.87■□□□□ 0.93
STAG3Q9UJ98 KLHL26-201ENST00000300976 4407 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
STAG3Q9UJ98 ZBTB17-216ENST00000537142 2511 ntTSL 2 BASIC20.86■□□□□ 0.93
STAG3Q9UJ98 COL11A2-201ENST00000341947 6425 ntAPPRIS ALT2 TSL 5 BASIC20.86■□□□□ 0.93
STAG3Q9UJ98 UGT3A1-204ENST00000507113 1650 ntTSL 2 BASIC20.86■□□□□ 0.93
STAG3Q9UJ98 TYSND1-201ENST00000287078 3644 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
STAG3Q9UJ98 C19orf68-203ENST00000614654 3588 ntAPPRIS P2 TSL 5 BASIC20.86■□□□□ 0.93
STAG3Q9UJ98 CICP23-201ENST00000605013 2741 ntBASIC20.86■□□□□ 0.93
STAG3Q9UJ98 DHODH-201ENST00000219240 2426 ntAPPRIS P2 TSL 1 (best) BASIC20.86■□□□□ 0.93
STAG3Q9UJ98 MFSD1-203ENST00000415822 2423 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
STAG3Q9UJ98 PSG4-203ENST00000433626 1887 ntTSL 2 BASIC20.86■□□□□ 0.93
STAG3Q9UJ98 APTX-211ENST00000463596 1345 ntAPPRIS ALT2 TSL 1 (best) BASIC20.86■□□□□ 0.93
STAG3Q9UJ98 SNX14-210ENST00000505648 3193 ntTSL 2 BASIC20.86■□□□□ 0.93
STAG3Q9UJ98 PIGW-204ENST00000614443 2312 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
STAG3Q9UJ98 PYY2-201ENST00000315776 282 ntBASIC20.86■□□□□ 0.93
STAG3Q9UJ98 PLAC9-203ENST00000372270 534 ntAPPRIS ALT2 TSL 2 BASIC20.86■□□□□ 0.93
STAG3Q9UJ98 ZNRD1-203ENST00000376782 736 ntAPPRIS P1 TSL 2 BASIC20.86■□□□□ 0.93
STAG3Q9UJ98 TRBV4-1-201ENST00000390357 373 ntAPPRIS P1 BASIC20.86■□□□□ 0.93
STAG3Q9UJ98 TRBV4-2-201ENST00000390392 455 ntAPPRIS P1 BASIC20.86■□□□□ 0.93
STAG3Q9UJ98 NUPL2-202ENST00000410002 680 ntTSL 2 BASIC20.86■□□□□ 0.93
STAG3Q9UJ98 FAM92A-202ENST00000423990 914 ntTSL 5 BASIC20.86■□□□□ 0.93
STAG3Q9UJ98 AL603841.1-201ENST00000430516 664 ntBASIC20.86■□□□□ 0.93
STAG3Q9UJ98 AC092580.1-201ENST00000433998 658 ntBASIC20.86■□□□□ 0.93
STAG3Q9UJ98 GOSR1-204ENST00000451249 1231 ntAPPRIS ALT1 TSL 2 BASIC20.86■□□□□ 0.93
STAG3Q9UJ98 PIGT-208ENST00000545755 1158 ntTSL 5 BASIC20.86■□□□□ 0.93
STAG3Q9UJ98 SNHG21-204ENST00000559366 674 ntTSL 2 BASIC20.86■□□□□ 0.93
STAG3Q9UJ98 AC136944.4-201ENST00000568893 660 ntTSL 4 BASIC20.86■□□□□ 0.93
STAG3Q9UJ98 AC068025.1-201ENST00000577218 762 ntTSL 3 BASIC20.86■□□□□ 0.93
STAG3Q9UJ98 AL136040.2-201ENST00000618431 1130 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
STAG3Q9UJ98 AC148477.9-201ENST00000623974 539 ntBASIC20.86■□□□□ 0.93
STAG3Q9UJ98 FOXP3-202ENST00000376199 2274 ntTSL 2 BASIC20.86■□□□□ 0.93
STAG3Q9UJ98 ARNTL-201ENST00000389707 2776 ntAPPRIS P3 TSL 1 (best) BASIC20.86■□□□□ 0.93
STAG3Q9UJ98 SLC45A1-202ENST00000471889 2784 ntTSL 5 BASIC20.86■□□□□ 0.93
STAG3Q9UJ98 XKRX-202ENST00000468904 2249 ntTSL 2 BASIC20.86■□□□□ 0.93
STAG3Q9UJ98 CHEK2-204ENST00000382580 1971 ntAPPRIS ALT2 TSL 1 (best) BASIC20.86■□□□□ 0.93
STAG3Q9UJ98 TMEM176B-204ENST00000447204 1430 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
STAG3Q9UJ98 TMED7-TICAM2-201ENST00000282382 3491 ntAPPRIS P1 TSL 2 BASIC20.86■□□□□ 0.93
STAG3Q9UJ98 ETNPPL-201ENST00000296486 2099 ntAPPRIS P3 TSL 1 (best) BASIC20.85■□□□□ 0.93
STAG3Q9UJ98 SLC25A3-216ENST00000551917 1359 ntAPPRIS P4 TSL 2 BASIC20.85■□□□□ 0.93
STAG3Q9UJ98 CCL5-201ENST00000603197 1365 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
STAG3Q9UJ98 PCDHA1-201ENST00000378133 2726 ntBASIC20.85■□□□□ 0.93
STAG3Q9UJ98 FBXL5-201ENST00000341285 3385 ntAPPRIS P3 TSL 1 (best) BASIC20.85■□□□□ 0.93
STAG3Q9UJ98 TCF25-201ENST00000263346 2233 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
STAG3Q9UJ98 CIT-219ENST00000612548 1799 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
STAG3Q9UJ98 CCL18-201ENST00000616054 1324 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
STAG3Q9UJ98 LAMA1-209ENST00000638611 1310 ntTSL 5 BASIC20.85■□□□□ 0.93
STAG3Q9UJ98 KIR3DL2-201ENST00000270442 1546 ntAPPRIS ALT2 TSL 1 (best) BASIC20.85■□□□□ 0.93
STAG3Q9UJ98 PLEKHB1-202ENST00000354190 2380 ntAPPRIS P4 TSL 1 (best) BASIC20.85■□□□□ 0.93
STAG3Q9UJ98 RECQL5-202ENST00000340830 1749 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
STAG3Q9UJ98 SLC47A1-203ENST00000436810 1719 ntTSL 2 BASIC20.85■□□□□ 0.93
STAG3Q9UJ98 AC082651.3-201ENST00000474667 1947 ntTSL 2 BASIC20.85■□□□□ 0.93
Retrieved 100 of 98,524 protein–RNA pairs in 73.2 ms