Protein–RNA interactions for Protein: Q9UHC9

NPC1L1, Niemann-Pick C1-like protein 1, humanhuman

Predictions only

Length 1,359 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPC1L1Q9UHC9 POTEM-201ENST00000547889 1817 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
NPC1L1Q9UHC9 CHIT1-201ENST00000255427 1598 ntTSL 2 BASIC19.43■□□□□ 0.7
NPC1L1Q9UHC9 MARVELD2-203ENST00000436532 1563 ntTSL 5 BASIC19.43■□□□□ 0.7
NPC1L1Q9UHC9 INTS4P1-203ENST00000641008 3683 ntBASIC19.43■□□□□ 0.7
NPC1L1Q9UHC9 DNAAF5-201ENST00000297440 3410 ntAPPRIS P2 TSL 1 (best) BASIC19.43■□□□□ 0.7
NPC1L1Q9UHC9 LINC00115-201ENST00000473798 1317 ntBASIC19.43■□□□□ 0.7
NPC1L1Q9UHC9 VAV3-210ENST00000527011 4510 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
NPC1L1Q9UHC9 ANTXR1-201ENST00000303714 5859 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
NPC1L1Q9UHC9 MRM2-201ENST00000242257 1601 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
NPC1L1Q9UHC9 ZNF256-201ENST00000282308 2172 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
NPC1L1Q9UHC9 CCDC51-202ENST00000412398 1385 ntTSL 2 BASIC19.43■□□□□ 0.7
NPC1L1Q9UHC9 SGK3-208ENST00000521198 3306 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
NPC1L1Q9UHC9 ITGA6-201ENST00000264107 5618 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
NPC1L1Q9UHC9 IQCE-216ENST00000611775 2289 ntAPPRIS ALT2 TSL 2 BASIC19.43■□□□□ 0.7
NPC1L1Q9UHC9 CLTCL1-212ENST00000622493 1714 ntTSL 2 BASIC19.43■□□□□ 0.7
NPC1L1Q9UHC9 AC015909.3-201ENST00000572855 1794 ntBASIC19.43■□□□□ 0.7
NPC1L1Q9UHC9 WSCD1-202ENST00000539421 2665 ntAPPRIS P1 TSL 5 BASIC19.43■□□□□ 0.7
NPC1L1Q9UHC9 KCNH3-201ENST00000257981 3867 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
NPC1L1Q9UHC9 RGS3-208ENST00000394646 2716 ntTSL 2 BASIC19.43■□□□□ 0.7
NPC1L1Q9UHC9 VRK3-217ENST00000599538 2126 ntAPPRIS P3 TSL 1 (best) BASIC19.43■□□□□ 0.7
NPC1L1Q9UHC9 LGALS12-204ENST00000415491 1816 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
NPC1L1Q9UHC9 VILL-202ENST00000383759 2787 ntAPPRIS P1 TSL 5 BASIC19.43■□□□□ 0.7
NPC1L1Q9UHC9 METAP2-205ENST00000546753 1862 ntTSL 2 BASIC19.43■□□□□ 0.7
NPC1L1Q9UHC9 KRT8P24-201ENST00000560290 1559 ntBASIC19.43■□□□□ 0.7
NPC1L1Q9UHC9 LINC01138-206ENST00000622328 2212 ntTSL 2 BASIC19.43■□□□□ 0.7
NPC1L1Q9UHC9 CRB3-201ENST00000308243 631 ntAPPRIS ALT2 TSL 2 BASIC19.43■□□□□ 0.7
NPC1L1Q9UHC9 CELA3B-201ENST00000337107 897 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
NPC1L1Q9UHC9 MBP-201ENST00000354542 575 ntTSL 2 BASIC19.43■□□□□ 0.7
NPC1L1Q9UHC9 MPP6-202ENST00000396475 3848 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
NPC1L1Q9UHC9 GSTP1-201ENST00000398603 700 ntTSL 3 BASIC19.43■□□□□ 0.7
NPC1L1Q9UHC9 LINC01118-202ENST00000409912 1023 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
NPC1L1Q9UHC9 LINC00313-205ENST00000427188 967 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
NPC1L1Q9UHC9 HLA-DQB2-232ENST00000437316 1214 ntAPPRIS P1 BASIC19.43■□□□□ 0.7
NPC1L1Q9UHC9 AL358393.1-201ENST00000456771 532 ntTSL 2 BASIC19.43■□□□□ 0.7
NPC1L1Q9UHC9 PCOLCE2-208ENST00000485766 1088 ntTSL 5 BASIC19.43■□□□□ 0.7
NPC1L1Q9UHC9 POU5F1P2-201ENST00000521750 823 ntBASIC19.43■□□□□ 0.7
NPC1L1Q9UHC9 EEF1D-218ENST00000526838 926 ntAPPRIS ALT2 TSL 2 BASIC19.43■□□□□ 0.7
NPC1L1Q9UHC9 AC104758.2-201ENST00000562716 483 ntTSL 3 BASIC19.43■□□□□ 0.7
NPC1L1Q9UHC9 AC020922.3-201ENST00000595064 547 ntBASIC19.43■□□□□ 0.7
NPC1L1Q9UHC9 AC022001.2-201ENST00000607849 580 ntTSL 2 BASIC19.43■□□□□ 0.7
NPC1L1Q9UHC9 EAF1-AS1-208ENST00000608408 770 ntTSL 5 BASIC19.43■□□□□ 0.7
NPC1L1Q9UHC9 DMPK-202ENST00000343373 3227 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
NPC1L1Q9UHC9 MPPE1-211ENST00000588072 4236 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
NPC1L1Q9UHC9 ADI1-201ENST00000327435 2391 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
NPC1L1Q9UHC9 POM121C-208ENST00000615331 5835 ntAPPRIS P2 TSL 1 (best) BASIC19.42■□□□□ 0.7
NPC1L1Q9UHC9 C3orf52-202ENST00000431717 2054 ntAPPRIS ALT2 TSL 2 BASIC19.42■□□□□ 0.7
NPC1L1Q9UHC9 RBM14-201ENST00000310137 2828 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
NPC1L1Q9UHC9 SEMA4D-204ENST00000420101 1837 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
NPC1L1Q9UHC9 AL353803.2-201ENST00000436510 1846 ntTSL 5 BASIC19.42■□□□□ 0.7
NPC1L1Q9UHC9 RHD-209ENST00000568195 1467 ntAPPRIS ALT2 TSL 1 (best) BASIC19.42■□□□□ 0.7
NPC1L1Q9UHC9 PSD-209ENST00000611678 3382 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
NPC1L1Q9UHC9 GGT1-201ENST00000248923 2326 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
NPC1L1Q9UHC9 PLAGL1-206ENST00000416623 3237 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
NPC1L1Q9UHC9 TRIT1-214ENST00000537440 2026 ntTSL 5 BASIC19.42■□□□□ 0.7
NPC1L1Q9UHC9 ELOA2-202ENST00000620522 1641 ntAPPRIS ALT2 TSL 5 BASIC19.42■□□□□ 0.7
NPC1L1Q9UHC9 FAM160A2-202ENST00000449352 3354 ntAPPRIS ALT1 TSL 1 (best) BASIC19.42■□□□□ 0.7
NPC1L1Q9UHC9 VPS25-201ENST00000253794 1101 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
NPC1L1Q9UHC9 UBL4A-201ENST00000369653 711 ntTSL 3 BASIC19.42■□□□□ 0.7
NPC1L1Q9UHC9 PPIE-203ENST00000372830 1198 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
NPC1L1Q9UHC9 ELK2AP-201ENST00000392510 1007 ntBASIC19.42■□□□□ 0.7
NPC1L1Q9UHC9 DUX4L50-201ENST00000455245 715 ntBASIC19.42■□□□□ 0.7
NPC1L1Q9UHC9 TPI1-206ENST00000488464 791 ntTSL 5 BASIC19.42■□□□□ 0.7
NPC1L1Q9UHC9 AL136088.1-202ENST00000525871 439 ntTSL 2 BASIC19.42■□□□□ 0.7
NPC1L1Q9UHC9 CEP95-212ENST00000581056 903 ntAPPRIS ALT2 TSL 2 BASIC19.42■□□□□ 0.7
NPC1L1Q9UHC9 PGPEP1-206ENST00000597431 545 ntTSL 5 BASIC19.42■□□□□ 0.7
NPC1L1Q9UHC9 SLC12A5-216ENST00000626701 617 ntTSL 3 BASIC19.42■□□□□ 0.7
NPC1L1Q9UHC9 SLC39A14-201ENST00000240095 1708 ntAPPRIS ALT2 TSL 1 (best) BASIC19.42■□□□□ 0.7
NPC1L1Q9UHC9 OR2A25-202ENST00000641441 1733 ntAPPRIS P1 BASIC19.42■□□□□ 0.7
NPC1L1Q9UHC9 ERO1A-201ENST00000395686 5285 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
NPC1L1Q9UHC9 CHIT1-202ENST00000367229 2246 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
NPC1L1Q9UHC9 SH3D21-205ENST00000505871 2205 ntTSL 2 BASIC19.42■□□□□ 0.7
NPC1L1Q9UHC9 AL021395.1-201ENST00000611791 2232 ntTSL 5 BASIC19.42■□□□□ 0.7
NPC1L1Q9UHC9 DNAJB1-201ENST00000254322 2264 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
NPC1L1Q9UHC9 RAD23B-201ENST00000358015 4119 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
NPC1L1Q9UHC9 MCF2L2-208ENST00000473233 4748 ntAPPRIS ALT2 TSL 5 BASIC19.41■□□□□ 0.7
NPC1L1Q9UHC9 OPCML-IT1-201ENST00000533859 2936 ntTSL 2 BASIC19.41■□□□□ 0.7
NPC1L1Q9UHC9 LILRA2-203ENST00000391737 1452 ntAPPRIS ALT2 TSL 1 (best) BASIC19.41■□□□□ 0.7
NPC1L1Q9UHC9 OARD1-203ENST00000463088 1515 ntAPPRIS P1 TSL 2 BASIC19.41■□□□□ 0.7
NPC1L1Q9UHC9 CALCB-203ENST00000533448 2097 ntAPPRIS P1 TSL 2 BASIC19.41■□□□□ 0.7
NPC1L1Q9UHC9 MAX-219ENST00000618858 2141 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
NPC1L1Q9UHC9 ORC6-201ENST00000219097 1628 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
NPC1L1Q9UHC9 CLEC18B-204ENST00000617101 2321 ntAPPRIS ALT2 TSL 1 (best) BASIC19.41■□□□□ 0.7
NPC1L1Q9UHC9 LRP10-203ENST00000546834 1780 ntAPPRIS ALT2 TSL 5 BASIC19.41■□□□□ 0.7
NPC1L1Q9UHC9 ADD3-202ENST00000356080 3081 ntAPPRIS P4 TSL 1 (best) BASIC19.41■□□□□ 0.7
NPC1L1Q9UHC9 SLC5A4-AS1-201ENST00000434942 876 ntTSL 3 BASIC19.41■□□□□ 0.7
NPC1L1Q9UHC9 RPS6KA2-AS1-201ENST00000455390 627 ntTSL 5 BASIC19.41■□□□□ 0.7
NPC1L1Q9UHC9 TMEM14C-205ENST00000541412 1177 ntAPPRIS P1 TSL 2 BASIC19.41■□□□□ 0.7
NPC1L1Q9UHC9 TMEM91-211ENST00000544232 725 ntTSL 3 BASIC19.41■□□□□ 0.7
NPC1L1Q9UHC9 NAT9-211ENST00000580632 799 ntTSL 3 BASIC19.41■□□□□ 0.7
NPC1L1Q9UHC9 AC011498.6-201ENST00000592034 510 ntTSL 5 BASIC19.41■□□□□ 0.7
NPC1L1Q9UHC9 C17orf50-202ENST00000604830 477 ntTSL 3 BASIC19.41■□□□□ 0.7
NPC1L1Q9UHC9 ROPN1-211ENST00000620893 1006 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
NPC1L1Q9UHC9 CCAR2-202ENST00000389279 3980 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
NPC1L1Q9UHC9 SLC41A3-211ENST00000508835 1480 ntTSL 2 BASIC19.41■□□□□ 0.7
NPC1L1Q9UHC9 ZNF180-202ENST00000391956 3049 ntAPPRIS ALT2 TSL 2 BASIC19.4■□□□□ 0.7
NPC1L1Q9UHC9 SDF2-201ENST00000247020 1568 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
NPC1L1Q9UHC9 RRM2B-201ENST00000251810 4931 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
NPC1L1Q9UHC9 MAGEA1-201ENST00000356661 1710 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
NPC1L1Q9UHC9 ADRA2A-201ENST00000280155 3745 ntAPPRIS P1 BASIC19.4■□□□□ 0.7
NPC1L1Q9UHC9 GJD2-201ENST00000290374 2889 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Retrieved 100 of 98,524 protein–RNA pairs in 83.2 ms