Protein–RNA interactions for Protein: Q9P109

GCNT4, Beta-1,3-galactosyl-O-glycosyl-glycoprotein beta-1,6-N-acetylglucosaminyltransferase 4, humanhuman

Predictions only

Length 453 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GCNT4Q9P109 PDPK1-201ENST00000268673 4728 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
GCNT4Q9P109 SIGLEC6-202ENST00000346477 1940 ntAPPRIS ALT2 TSL 2 BASIC16.04■□□□□ 0.16
GCNT4Q9P109 NUP50-201ENST00000347635 5233 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
GCNT4Q9P109 STRADA-243ENST00000640086 1925 ntTSL 5 BASIC16.04■□□□□ 0.16
GCNT4Q9P109 SLC35C2-201ENST00000243896 2447 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
GCNT4Q9P109 AC090505.1-201ENST00000430515 1834 ntBASIC16.04■□□□□ 0.16
GCNT4Q9P109 UBE2T-201ENST00000367274 922 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
GCNT4Q9P109 TAF8-202ENST00000372978 794 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
GCNT4Q9P109 BUD31-202ENST00000403633 1139 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
GCNT4Q9P109 ROPN1-202ENST00000405845 1007 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
GCNT4Q9P109 RN7SKP175-201ENST00000408472 289 ntBASIC16.04■□□□□ 0.16
GCNT4Q9P109 AC017104.1-201ENST00000415129 720 ntTSL 3 BASIC16.04■□□□□ 0.16
GCNT4Q9P109 AL355483.2-201ENST00000421637 675 ntTSL 3 BASIC16.04■□□□□ 0.16
GCNT4Q9P109 LINC02158-201ENST00000432377 897 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
GCNT4Q9P109 GEMIN4-202ENST00000437269 1182 ntTSL 2 BASIC16.04■□□□□ 0.16
GCNT4Q9P109 KLC4-205ENST00000458460 1251 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
GCNT4Q9P109 NME2-206ENST00000513177 692 ntAPPRIS P1 TSL 2 BASIC16.04■□□□□ 0.16
GCNT4Q9P109 PAFAH1B3-202ENST00000538771 1098 ntAPPRIS P1 TSL 2 BASIC16.04■□□□□ 0.16
GCNT4Q9P109 AC090502.1-201ENST00000549905 748 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
GCNT4Q9P109 AC090502.1-204ENST00000551210 469 ntTSL 2 BASIC16.04■□□□□ 0.16
GCNT4Q9P109 AC138123.2-203ENST00000552451 653 ntTSL 3 BASIC16.04■□□□□ 0.16
GCNT4Q9P109 VASH1-AS1-201ENST00000554058 871 ntTSL 3 BASIC16.04■□□□□ 0.16
GCNT4Q9P109 AL122035.1-201ENST00000556640 550 ntTSL 2 BASIC16.04■□□□□ 0.16
GCNT4Q9P109 AL133153.2-201ENST00000557524 303 ntTSL 3 BASIC16.04■□□□□ 0.16
GCNT4Q9P109 AC091891.1-201ENST00000560688 688 ntTSL 3 BASIC16.04■□□□□ 0.16
GCNT4Q9P109 AC106820.3-201ENST00000561653 397 ntBASIC16.04■□□□□ 0.16
GCNT4Q9P109 STRADA-221ENST00000582137 1238 ntTSL 2 BASIC16.04■□□□□ 0.16
GCNT4Q9P109 AP001002.3-201ENST00000623482 206 ntBASIC16.04■□□□□ 0.16
GCNT4Q9P109 SEZ6-203ENST00000360295 4306 ntAPPRIS ALT2 TSL 5 BASIC16.04■□□□□ 0.16
GCNT4Q9P109 ATG10-203ENST00000458350 1795 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
GCNT4Q9P109 MEF2C-AS1-210ENST00000514011 1754 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
GCNT4Q9P109 SH2D3C-206ENST00000429553 2794 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
GCNT4Q9P109 P4HA1-205ENST00000440381 2790 ntTSL 3 BASIC16.04■□□□□ 0.16
GCNT4Q9P109 NXF1-213ENST00000532297 2795 ntAPPRIS P1 TSL 5 BASIC16.04■□□□□ 0.16
GCNT4Q9P109 GSN-209ENST00000449733 2702 ntTSL 2 BASIC16.04■□□□□ 0.16
GCNT4Q9P109 ZFAND6-222ENST00000613266 1729 ntAPPRIS P1 TSL 3 BASIC16.04■□□□□ 0.16
GCNT4Q9P109 FAM219A-209ENST00000445726 3644 ntAPPRIS ALT1 TSL 2 BASIC16.04■□□□□ 0.16
GCNT4Q9P109 ILF2-201ENST00000361891 1659 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
GCNT4Q9P109 CSRNP2-201ENST00000228515 4471 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
GCNT4Q9P109 CAPN3-207ENST00000397200 1643 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
GCNT4Q9P109 TAMM41-205ENST00000444133 1619 ntTSL 2 BASIC16.04■□□□□ 0.16
GCNT4Q9P109 KCNMA1-202ENST00000286628 6233 ntAPPRIS ALT2 TSL 1 (best) BASIC16.04■□□□□ 0.16
GCNT4Q9P109 PRAMEF8-202ENST00000614831 1592 ntAPPRIS P1 TSL 5 BASIC16.04■□□□□ 0.16
GCNT4Q9P109 PRAMEF7-202ENST00000616979 1592 ntAPPRIS P1 TSL 5 BASIC16.04■□□□□ 0.16
GCNT4Q9P109 PHLDA1-201ENST00000266671 8069 ntAPPRIS P2 TSL 1 (best) BASIC16.04■□□□□ 0.16
GCNT4Q9P109 MED12L-203ENST00000422248 2757 ntAPPRIS ALT2 TSL 2 BASIC16.04■□□□□ 0.16
GCNT4Q9P109 SPATA20-201ENST00000006658 2719 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
GCNT4Q9P109 SPATS2-203ENST00000547865 1810 ntTSL 2 BASIC16.03■□□□□ 0.16
GCNT4Q9P109 DMTN-203ENST00000381470 2601 ntTSL 5 BASIC16.03■□□□□ 0.16
GCNT4Q9P109 PRKD2-206ENST00000595515 3012 ntTSL 2 BASIC16.03■□□□□ 0.16
GCNT4Q9P109 PDE8B-203ENST00000340978 3426 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
GCNT4Q9P109 ZNF256-201ENST00000282308 2172 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
GCNT4Q9P109 RN7SL832P-201ENST00000607781 1756 ntBASIC16.03■□□□□ 0.16
GCNT4Q9P109 PRG2-202ENST00000525955 1367 ntAPPRIS P3 TSL 2 BASIC16.03■□□□□ 0.16
GCNT4Q9P109 LBHD1-201ENST00000354588 1320 ntAPPRIS P2 TSL 1 (best) BASIC16.03■□□□□ 0.16
GCNT4Q9P109 TXNDC5-204ENST00000473453 1301 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
GCNT4Q9P109 ZSCAN30-212ENST00000639929 1305 ntTSL 5 BASIC16.03■□□□□ 0.16
GCNT4Q9P109 GABRA1-201ENST00000023897 2083 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
GCNT4Q9P109 BOLL-203ENST00000392296 2838 ntAPPRIS ALT2 TSL 1 (best) BASIC16.03■□□□□ 0.16
GCNT4Q9P109 ZNF239-203ENST00000426961 2027 ntAPPRIS P1 TSL 2 BASIC16.03■□□□□ 0.16
GCNT4Q9P109 ELAC2-201ENST00000338034 3148 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
GCNT4Q9P109 KBTBD4-202ENST00000430070 2372 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
GCNT4Q9P109 FIS1-201ENST00000223136 734 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
GCNT4Q9P109 SPDYE7P-201ENST00000355920 1064 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
GCNT4Q9P109 FGFR1-204ENST00000356207 3824 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
GCNT4Q9P109 DBI-203ENST00000393103 599 ntAPPRIS P4 TSL 1 (best) BASIC16.03■□□□□ 0.16
GCNT4Q9P109 C17orf51-202ENST00000412778 877 ntAPPRIS ALT2 TSL 3 BASIC16.03■□□□□ 0.16
GCNT4Q9P109 FAM21FP-201ENST00000426241 1131 ntBASIC16.03■□□□□ 0.16
GCNT4Q9P109 ACTBP11-201ENST00000436287 1126 ntBASIC16.03■□□□□ 0.16
GCNT4Q9P109 STARD4-205ENST00000505803 803 ntAPPRIS P1 TSL 2 BASIC16.03■□□□□ 0.16
GCNT4Q9P109 STARD4-207ENST00000509887 1186 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
GCNT4Q9P109 AP002992.1-201ENST00000527519 491 ntTSL 3 BASIC16.03■□□□□ 0.16
GCNT4Q9P109 LINC02449-203ENST00000536034 451 ntTSL 3 BASIC16.03■□□□□ 0.16
GCNT4Q9P109 GSTZ1-219ENST00000557639 873 ntTSL 2 BASIC16.03■□□□□ 0.16
GCNT4Q9P109 AC132938.4-201ENST00000623835 848 ntBASIC16.03■□□□□ 0.16
GCNT4Q9P109 AC008687.7-202ENST00000637404 953 ntBASIC16.03■□□□□ 0.16
GCNT4Q9P109 SFMBT1-201ENST00000394752 4548 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
GCNT4Q9P109 MEGF11-204ENST00000422354 5914 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
GCNT4Q9P109 PPM1F-201ENST00000263212 5143 ntAPPRIS P2 TSL 1 (best) BASIC16.03■□□□□ 0.16
GCNT4Q9P109 GTF2A1L-203ENST00000430487 1575 ntTSL 2 BASIC16.03■□□□□ 0.16
GCNT4Q9P109 DDX49-214ENST00000629999 1912 ntTSL 5 BASIC16.03■□□□□ 0.16
GCNT4Q9P109 ARFGAP1-203ENST00000370283 3281 ntAPPRIS ALT2 TSL 1 (best) BASIC16.03■□□□□ 0.16
GCNT4Q9P109 GRK6-211ENST00000528793 2571 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
GCNT4Q9P109 CDK5RAP3-201ENST00000338399 1866 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
GCNT4Q9P109 CYP4B1-201ENST00000271153 2171 ntAPPRIS P3 TSL 1 (best) BASIC16.03■□□□□ 0.16
GCNT4Q9P109 SRD5A3-201ENST00000264228 4190 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
GCNT4Q9P109 AC215219.1-201ENST00000400706 1817 ntBASIC16.03■□□□□ 0.16
GCNT4Q9P109 SMARCA2-203ENST00000349721 5761 ntTSL 5 BASIC16.03■□□□□ 0.16
GCNT4Q9P109 NIN-202ENST00000324330 4364 ntTSL 5 BASIC16.03■□□□□ 0.16
GCNT4Q9P109 TMEM132E-203ENST00000631683 4379 ntAPPRIS P2 TSL 5 BASIC16.03■□□□□ 0.16
GCNT4Q9P109 CHFR-204ENST00000443047 2990 ntTSL 2 BASIC16.02■□□□□ 0.16
GCNT4Q9P109 AMOTL2-201ENST00000249883 4488 ntAPPRIS P3 TSL 1 (best) BASIC16.02■□□□□ 0.16
GCNT4Q9P109 CLDND1-215ENST00000507874 1380 ntTSL 3 BASIC16.02■□□□□ 0.16
GCNT4Q9P109 CAMKK2-202ENST00000337174 5304 ntAPPRIS ALT2 TSL 1 (best) BASIC16.02■□□□□ 0.16
GCNT4Q9P109 ACSF2-202ENST00000427954 2251 ntTSL 2 BASIC16.02■□□□□ 0.16
GCNT4Q9P109 TMEM143-201ENST00000293261 2560 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
GCNT4Q9P109 SMOC2-201ENST00000354536 3150 ntTSL 1 (best) BASIC16.02■□□□□ 0.16
GCNT4Q9P109 KLF11-205ENST00000535335 4033 ntAPPRIS ALT2 TSL 2 BASIC16.02■□□□□ 0.16
GCNT4Q9P109 BAIAP2-201ENST00000321280 1939 ntAPPRIS ALT2 TSL 1 (best) BASIC16.02■□□□□ 0.16
GCNT4Q9P109 HHEX-202ENST00000472590 1605 ntTSL 2 BASIC16.02■□□□□ 0.16
Retrieved 100 of 98,524 protein–RNA pairs in 34.1 ms