Protein–RNA interactions for Protein: Q9NQC3

RTN4, Reticulon-4, humanhuman

Known RBP Predictions only

Length 1,192 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RTN4Q9NQC3 BABAM1-201ENST00000359435 1472 ntAPPRIS P3 TSL 1 (best) BASIC17.63■□□□□ 0.41
RTN4Q9NQC3 ZFP1-209ENST00000570010 1457 ntAPPRIS P1 TSL 2 BASIC17.63■□□□□ 0.41
RTN4Q9NQC3 DRD2-210ENST00000544518 2473 ntAPPRIS ALT1 TSL 1 (best) BASIC17.63■□□□□ 0.41
RTN4Q9NQC3 ACADM-201ENST00000370834 2172 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
RTN4Q9NQC3 SMIM5-201ENST00000375215 1546 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
RTN4Q9NQC3 FGFRL1-202ENST00000398484 3639 ntAPPRIS P1 TSL 5 BASIC17.63■□□□□ 0.41
RTN4Q9NQC3 NSD2-204ENST00000382891 7534 ntAPPRIS P1 TSL 5 BASIC17.63■□□□□ 0.41
RTN4Q9NQC3 EPHA5-204ENST00000511294 5176 ntAPPRIS ALT2 TSL 1 (best) BASIC17.63■□□□□ 0.41
RTN4Q9NQC3 FBF1-210ENST00000592193 3444 ntAPPRIS ALT2 TSL 1 (best) BASIC17.63■□□□□ 0.41
RTN4Q9NQC3 ACO2-201ENST00000216254 2741 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
RTN4Q9NQC3 DRAP1-202ENST00000376991 819 ntTSL 5 BASIC17.63■□□□□ 0.41
RTN4Q9NQC3 AC062015.1-201ENST00000423838 1134 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
RTN4Q9NQC3 CHCHD3-203ENST00000448878 1038 ntTSL 5 BASIC17.63■□□□□ 0.41
RTN4Q9NQC3 PKD2-202ENST00000502363 1222 ntTSL 5 BASIC17.63■□□□□ 0.41
RTN4Q9NQC3 NPM2-204ENST00000518119 1190 ntAPPRIS P2 TSL 1 (best) BASIC17.63■□□□□ 0.41
RTN4Q9NQC3 C8orf46-213ENST00000521495 557 ntTSL 4 BASIC17.63■□□□□ 0.41
RTN4Q9NQC3 AC239802.2-201ENST00000532137 554 ntTSL 4 BASIC17.63■□□□□ 0.41
RTN4Q9NQC3 AL031008.1-201ENST00000619963 541 ntBASIC17.63■□□□□ 0.41
RTN4Q9NQC3 AC244517.5-205ENST00000623615 575 ntTSL 4 BASIC17.63■□□□□ 0.41
RTN4Q9NQC3 AC007064.4-201ENST00000637740 555 ntBASIC17.63■□□□□ 0.41
RTN4Q9NQC3 C3orf18-206ENST00000449241 2365 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
RTN4Q9NQC3 RAPSN-201ENST00000298854 1671 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
RTN4Q9NQC3 LGR6-203ENST00000367278 3567 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
RTN4Q9NQC3 AL357054.3-201ENST00000607084 2055 ntTSL 5 BASIC17.63■□□□□ 0.41
RTN4Q9NQC3 ATP13A2-203ENST00000452699 3981 ntAPPRIS ALT2 TSL 1 (best) BASIC17.63■□□□□ 0.41
RTN4Q9NQC3 TRIM69-206ENST00000559390 2486 ntAPPRIS P1 TSL 2 BASIC17.63■□□□□ 0.41
RTN4Q9NQC3 CALD1-206ENST00000424922 2124 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
RTN4Q9NQC3 AP000845.1-201ENST00000581677 2131 ntBASIC17.63■□□□□ 0.41
RTN4Q9NQC3 AC134407.3-201ENST00000624035 2139 ntBASIC17.63■□□□□ 0.41
RTN4Q9NQC3 FAHD2B-202ENST00000414820 1388 ntAPPRIS P1 TSL 5 BASIC17.63■□□□□ 0.41
RTN4Q9NQC3 RERG-209ENST00000546331 1383 ntTSL 2 BASIC17.63■□□□□ 0.41
RTN4Q9NQC3 FOXP3-206ENST00000557224 1371 ntTSL 2 BASIC17.63■□□□□ 0.41
RTN4Q9NQC3 SYDE1-203ENST00000600252 3832 ntTSL 2 BASIC17.63■□□□□ 0.41
RTN4Q9NQC3 PHACTR3-201ENST00000355648 2247 ntTSL 2 BASIC17.63■□□□□ 0.41
RTN4Q9NQC3 TLL1-206ENST00000513213 1829 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
RTN4Q9NQC3 SPATS2-203ENST00000547865 1810 ntTSL 2 BASIC17.63■□□□□ 0.41
RTN4Q9NQC3 TEAD2-203ENST00000539846 1444 ntTSL 2 BASIC17.63■□□□□ 0.41
RTN4Q9NQC3 FAM237B-201ENST00000637645 3877 ntAPPRIS P1 TSL 5 BASIC17.63■□□□□ 0.41
RTN4Q9NQC3 HK3-201ENST00000292432 3066 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
RTN4Q9NQC3 CREB3L4-202ENST00000368600 1496 ntAPPRIS ALT2 TSL 1 (best) BASIC17.63■□□□□ 0.41
RTN4Q9NQC3 FHAD1-205ENST00000375997 1459 ntTSL 3 BASIC17.63■□□□□ 0.41
RTN4Q9NQC3 USP4-203ENST00000415188 1454 ntTSL 3 BASIC17.63■□□□□ 0.41
RTN4Q9NQC3 KIAA0513-202ENST00000538274 7381 ntTSL 2 BASIC17.63■□□□□ 0.41
RTN4Q9NQC3 TAX1BP1-207ENST00000433216 3174 ntTSL 2 BASIC17.63■□□□□ 0.41
RTN4Q9NQC3 ALX4-201ENST00000329255 5750 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
RTN4Q9NQC3 NCOR2-201ENST00000356219 7226 ntTSL 5 BASIC17.62■□□□□ 0.41
RTN4Q9NQC3 CCNE2-205ENST00000520509 3330 ntAPPRIS P1 TSL 5 BASIC17.62■□□□□ 0.41
RTN4Q9NQC3 SLC5A4-201ENST00000266086 2030 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
RTN4Q9NQC3 ANO10-202ENST00000350459 2039 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
RTN4Q9NQC3 TRMT10B-202ENST00000377753 2027 ntTSL 2 BASIC17.62■□□□□ 0.41
RTN4Q9NQC3 NISCH-207ENST00000479054 5173 ntAPPRIS P3 TSL 1 (best) BASIC17.62■□□□□ 0.41
RTN4Q9NQC3 RBM15-203ENST00000602849 3368 ntAPPRIS P1 BASIC17.62■□□□□ 0.41
RTN4Q9NQC3 ADCY7-203ENST00000537579 2090 ntTSL 5 BASIC17.62■□□□□ 0.41
RTN4Q9NQC3 CD14-202ENST00000401743 1648 ntAPPRIS P1 TSL 3 BASIC17.62■□□□□ 0.41
RTN4Q9NQC3 TOP3B-202ENST00000398793 3107 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
RTN4Q9NQC3 MLST8-201ENST00000301724 1735 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
RTN4Q9NQC3 LIM2-201ENST00000221973 983 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
RTN4Q9NQC3 ELK1-202ENST00000343894 736 ntAPPRIS ALT2 TSL 1 (best) BASIC17.62■□□□□ 0.41
RTN4Q9NQC3 ANP32E-201ENST00000369114 1048 ntTSL 3 BASIC17.62■□□□□ 0.41
RTN4Q9NQC3 KDELR2-206ENST00000490996 655 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
RTN4Q9NQC3 AP000793.1-201ENST00000527364 740 ntTSL 3 BASIC17.62■□□□□ 0.41
RTN4Q9NQC3 CD63-210ENST00000550776 870 ntTSL 5 BASIC17.62■□□□□ 0.41
RTN4Q9NQC3 TMEM220-AS1-206ENST00000583343 876 ntTSL 3 BASIC17.62■□□□□ 0.41
RTN4Q9NQC3 AC005625.1-201ENST00000590304 472 ntTSL 3 BASIC17.62■□□□□ 0.41
RTN4Q9NQC3 GIPC1-213ENST00000591349 1068 ntTSL 2 BASIC17.62■□□□□ 0.41
RTN4Q9NQC3 HEXIM2-207ENST00000592695 1246 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
RTN4Q9NQC3 AC007292.3-201ENST00000594776 357 ntTSL 5 BASIC17.62■□□□□ 0.41
RTN4Q9NQC3 PTPN5-205ENST00000477854 2826 ntTSL 5 BASIC17.62■□□□□ 0.41
RTN4Q9NQC3 CASS4-202ENST00000434344 2888 ntTSL 2 BASIC17.62■□□□□ 0.41
RTN4Q9NQC3 FOXS1-201ENST00000375978 1319 ntAPPRIS P1 BASIC17.62■□□□□ 0.41
RTN4Q9NQC3 PMS2P7-201ENST00000506558 1336 ntBASIC17.62■□□□□ 0.41
RTN4Q9NQC3 UBE3A-220ENST00000630424 5075 ntAPPRIS P3 TSL 5 BASIC17.62■□□□□ 0.41
RTN4Q9NQC3 ZNF772-204ENST00000427512 5130 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
RTN4Q9NQC3 DTX2P1-UPK3BP1-PMS2P11-203ENST00000636308 4646 ntTSL 5 BASIC17.62■□□□□ 0.41
RTN4Q9NQC3 ILF3-AS1-201ENST00000591501 1983 ntBASIC17.62■□□□□ 0.41
RTN4Q9NQC3 MGLL-202ENST00000398101 1414 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
RTN4Q9NQC3 ZNF384-201ENST00000319770 3266 ntTSL 2 BASIC17.62■□□□□ 0.41
RTN4Q9NQC3 MAD1L1-201ENST00000265854 2718 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
RTN4Q9NQC3 NRXN1-207ENST00000404971 7578 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
RTN4Q9NQC3 SNHG20-202ENST00000434411 2143 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
RTN4Q9NQC3 F10-202ENST00000375559 1517 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
RTN4Q9NQC3 CLDN19-202ENST00000372539 1586 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
RTN4Q9NQC3 TEKT4P2-201ENST00000416067 1599 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
RTN4Q9NQC3 PNPLA8-206ENST00000436062 3462 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
RTN4Q9NQC3 HECTD2-201ENST00000298068 4802 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
RTN4Q9NQC3 MED19-201ENST00000337672 1637 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
RTN4Q9NQC3 CALCOCO1-218ENST00000550804 2291 ntAPPRIS P2 TSL 1 (best) BASIC17.61■□□□□ 0.41
RTN4Q9NQC3 TPX2-202ENST00000340513 3605 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
RTN4Q9NQC3 ARHGEF2-201ENST00000313667 2958 ntAPPRIS ALT1 TSL 1 (best) BASIC17.61■□□□□ 0.41
RTN4Q9NQC3 TCOF1-202ENST00000377797 5095 ntAPPRIS ALT2 TSL 5 BASIC17.61■□□□□ 0.41
RTN4Q9NQC3 RSPO2-201ENST00000276659 3111 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
RTN4Q9NQC3 ZBED8-202ENST00000523213 2484 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
RTN4Q9NQC3 PCDHA6-201ENST00000378126 3267 ntBASIC17.61■□□□□ 0.41
RTN4Q9NQC3 NFATC3-203ENST00000349223 6328 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
RTN4Q9NQC3 NR4A1-201ENST00000243050 2678 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
RTN4Q9NQC3 DQX1-202ENST00000404568 2689 ntAPPRIS P1 TSL 5 BASIC17.61■□□□□ 0.41
RTN4Q9NQC3 SNX14-201ENST00000314673 3486 ntAPPRIS P4 TSL 1 (best) BASIC17.61■□□□□ 0.41
RTN4Q9NQC3 KIAA0895-207ENST00000436884 1952 ntTSL 2 BASIC17.61■□□□□ 0.41
RTN4Q9NQC3 NLRP2-214ENST00000543010 3576 ntAPPRIS P3 TSL 1 (best) BASIC17.61■□□□□ 0.41
RTN4Q9NQC3 PIP5K1A-204ENST00000409426 3737 ntAPPRIS ALT2 TSL 5 BASIC17.61■□□□□ 0.41
Retrieved 100 of 98,524 protein–RNA pairs in 45 ms