Protein–RNA interactions for Protein: Q9C056

NKX6-2, Homeobox protein Nkx-6.2, humanhuman

Predicted RBP Predictions only

Length 277 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NKX6-2Q9C056 AC096734.2-201ENST00000562054 433 ntBASIC11.96□□□□□ -0.49
NKX6-2Q9C056 BRICD5-202ENST00000562360 783 ntTSL 2 BASIC11.96□□□□□ -0.49
NKX6-2Q9C056 AL138781.1-202ENST00000563018 775 ntTSL 3 BASIC11.96□□□□□ -0.49
NKX6-2Q9C056 AKTIP-212ENST00000570004 1162 ntAPPRIS P3 TSL 1 (best) BASIC11.96□□□□□ -0.49
NKX6-2Q9C056 CLEC4GP1-201ENST00000596555 870 ntBASIC11.96□□□□□ -0.49
NKX6-2Q9C056 CRB3-204ENST00000600229 1078 ntAPPRIS ALT2 TSL 2 BASIC11.96□□□□□ -0.49
NKX6-2Q9C056 AC023141.13-201ENST00000604991 943 ntBASIC11.96□□□□□ -0.49
NKX6-2Q9C056 NPM1-201ENST00000296930 1758 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
NKX6-2Q9C056 FGF7P3-202ENST00000640245 1707 ntTSL 4 BASIC11.96□□□□□ -0.49
NKX6-2Q9C056 HPSE-201ENST00000311412 4615 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.5
NKX6-2Q9C056 MCL1-204ENST00000620947 3626 ntTSL 1 (best) BASIC11.96□□□□□ -0.5
NKX6-2Q9C056 DMAC2-201ENST00000221943 1692 ntAPPRIS P1 TSL 2 BASIC11.96□□□□□ -0.5
NKX6-2Q9C056 AL021155.1-201ENST00000438808 2637 ntBASIC11.96□□□□□ -0.5
NKX6-2Q9C056 CSF2RB-202ENST00000403662 4863 ntAPPRIS P2 TSL 5 BASIC11.96□□□□□ -0.5
NKX6-2Q9C056 SLC25A18-202ENST00000399813 2057 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.5
NKX6-2Q9C056 AGGF1P1-201ENST00000509500 2073 ntBASIC11.96□□□□□ -0.5
NKX6-2Q9C056 SLFNL1-AS1-201ENST00000626479 4800 ntTSL 1 (best) BASIC11.96□□□□□ -0.5
NKX6-2Q9C056 CAPN1-202ENST00000524773 2960 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.5
NKX6-2Q9C056 GAB1-202ENST00000262995 7981 ntAPPRIS P4 TSL 1 (best) BASIC11.96□□□□□ -0.5
NKX6-2Q9C056 NOP58-201ENST00000264279 2046 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.5
NKX6-2Q9C056 FAM224A-201ENST00000419557 2031 ntTSL 2 BASIC11.96□□□□□ -0.5
NKX6-2Q9C056 FAM60A-203ENST00000454658 1555 ntAPPRIS P1 TSL 2 BASIC11.96□□□□□ -0.5
NKX6-2Q9C056 ZFYVE28-210ENST00000515169 1590 ntTSL 1 (best) BASIC11.96□□□□□ -0.5
NKX6-2Q9C056 CYP4F11-205ENST00000620614 2908 ntTSL 5 BASIC11.96□□□□□ -0.5
NKX6-2Q9C056 INHBE-201ENST00000266646 2429 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.5
NKX6-2Q9C056 NIN-206ENST00000453196 6785 ntAPPRIS ALT2 TSL 5 BASIC11.96□□□□□ -0.5
NKX6-2Q9C056 DPP8-204ENST00000358939 2822 ntTSL 2 BASIC11.96□□□□□ -0.5
NKX6-2Q9C056 IL9R-201ENST00000244174 1944 ntAPPRIS P3 TSL 1 (best) BASIC11.96□□□□□ -0.5
NKX6-2Q9C056 AL357143.1-202ENST00000640531 5777 ntTSL 5 BASIC11.96□□□□□ -0.5
NKX6-2Q9C056 CPN1-201ENST00000370418 1863 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
NKX6-2Q9C056 LINC01285-201ENST00000412422 2289 ntTSL 2 BASIC11.95□□□□□ -0.5
NKX6-2Q9C056 LITAF-203ENST00000413364 2292 ntTSL 2 BASIC11.95□□□□□ -0.5
NKX6-2Q9C056 ZNF792-201ENST00000404801 3888 ntAPPRIS P1 TSL 2 BASIC11.95□□□□□ -0.5
NKX6-2Q9C056 DDC-213ENST00000617822 1809 ntTSL 3 BASIC11.95□□□□□ -0.5
NKX6-2Q9C056 STAT3-203ENST00000404395 2633 ntAPPRIS ALT1 TSL 1 (best) BASIC11.95□□□□□ -0.5
NKX6-2Q9C056 CELF4-218ENST00000591287 3757 ntAPPRIS ALT1 TSL 1 (best) BASIC11.95□□□□□ -0.5
NKX6-2Q9C056 ZNF79-203ENST00000612342 2192 ntTSL 2 BASIC11.95□□□□□ -0.5
NKX6-2Q9C056 EBP-205ENST00000495186 1775 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
NKX6-2Q9C056 USP40-201ENST00000251722 5692 ntAPPRIS ALT2 TSL 5 BASIC11.95□□□□□ -0.5
NKX6-2Q9C056 SEMA4D-212ENST00000450295 5684 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
NKX6-2Q9C056 SPOCK3-207ENST00000504953 2900 ntAPPRIS P3 TSL 5 BASIC11.95□□□□□ -0.5
NKX6-2Q9C056 RAB37-203ENST00000392612 2528 ntTSL 2 BASIC11.95□□□□□ -0.5
NKX6-2Q9C056 SPAG5-AS1-201ENST00000414744 2143 ntTSL 1 (best) BASIC11.95□□□□□ -0.5
NKX6-2Q9C056 DOK4-210ENST00000566936 2851 ntTSL 3 BASIC11.95□□□□□ -0.5
NKX6-2Q9C056 ALKBH6-202ENST00000378875 973 ntAPPRIS P3 TSL 1 (best) BASIC11.95□□□□□ -0.5
NKX6-2Q9C056 AL157935.1-209ENST00000415141 1105 ntTSL 2 BASIC11.95□□□□□ -0.5
NKX6-2Q9C056 AC136604.1-201ENST00000418535 575 ntBASIC11.95□□□□□ -0.5
NKX6-2Q9C056 C16orf91-201ENST00000442039 978 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
NKX6-2Q9C056 VN2R19P-201ENST00000442399 1052 ntBASIC11.95□□□□□ -0.5
NKX6-2Q9C056 TMEM176A-202ENST00000461345 635 ntAPPRIS ALT2 TSL 5 BASIC11.95□□□□□ -0.5
NKX6-2Q9C056 SSSCA1-206ENST00000531405 879 ntTSL 2 BASIC11.95□□□□□ -0.5
NKX6-2Q9C056 AP000894.3-201ENST00000582554 351 ntTSL 5 BASIC11.95□□□□□ -0.5
NKX6-2Q9C056 IGFLR1-205ENST00000588992 730 ntAPPRIS ALT2 TSL 2 BASIC11.95□□□□□ -0.5
NKX6-2Q9C056 YIF1B-216ENST00000592694 1181 ntTSL 1 (best) BASIC11.95□□□□□ -0.5
NKX6-2Q9C056 AP000547.2-201ENST00000609641 661 ntTSL 5 BASIC11.95□□□□□ -0.5
NKX6-2Q9C056 SERF2-217ENST00000630046 862 ntTSL 5 BASIC11.95□□□□□ -0.5
NKX6-2Q9C056 MARCH10-201ENST00000311269 3090 ntAPPRIS P3 TSL 2 BASIC11.95□□□□□ -0.5
NKX6-2Q9C056 DLGAP1-201ENST00000315677 6683 ntAPPRIS P1 TSL 5 BASIC11.95□□□□□ -0.5
NKX6-2Q9C056 LINC00567-201ENST00000569854 3409 ntBASIC11.95□□□□□ -0.5
NKX6-2Q9C056 POLD1-210ENST00000599857 3435 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
NKX6-2Q9C056 TBC1D14-208ENST00000451522 4149 ntAPPRIS ALT1 TSL 5 BASIC11.95□□□□□ -0.5
NKX6-2Q9C056 ELN-204ENST00000357036 3361 ntAPPRIS ALT2 TSL 1 (best) BASIC11.95□□□□□ -0.5
NKX6-2Q9C056 YWHAQ-202ENST00000381844 2216 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
NKX6-2Q9C056 ALPL-206ENST00000539907 2241 ntTSL 2 BASIC11.95□□□□□ -0.5
NKX6-2Q9C056 FKBP6-201ENST00000252037 1500 ntAPPRIS P3 TSL 1 (best) BASIC11.95□□□□□ -0.5
NKX6-2Q9C056 PPP1R15B-201ENST00000367188 5227 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
NKX6-2Q9C056 ABCA17P-202ENST00000469908 4188 ntTSL 1 (best) BASIC11.95□□□□□ -0.5
NKX6-2Q9C056 GLRX3-202ENST00000368644 3827 ntAPPRIS P1 TSL 2 BASIC11.95□□□□□ -0.5
NKX6-2Q9C056 DGCR2-201ENST00000263196 4480 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
NKX6-2Q9C056 SHANK2-204ENST00000409530 2123 ntTSL 5 BASIC11.95□□□□□ -0.5
NKX6-2Q9C056 FAM212B-AS1-201ENST00000430373 2131 ntTSL 1 (best) BASIC11.95□□□□□ -0.5
NKX6-2Q9C056 SPINT1-201ENST00000344051 3056 ntAPPRIS P3 TSL 1 (best) BASIC11.95□□□□□ -0.5
NKX6-2Q9C056 SLC7A8-205ENST00000453702 1752 ntTSL 1 (best) BASIC11.95□□□□□ -0.5
NKX6-2Q9C056 SLC29A4-203ENST00000406453 2734 ntTSL 1 (best) BASIC11.95□□□□□ -0.5
NKX6-2Q9C056 TBC1D3E-201ENST00000621587 2076 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
NKX6-2Q9C056 LENG8-201ENST00000326764 3991 ntAPPRIS P2 TSL 1 (best) BASIC11.94□□□□□ -0.5
NKX6-2Q9C056 TMOD1-201ENST00000259365 3343 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
NKX6-2Q9C056 SMARCA4-205ENST00000450717 5506 ntTSL 5 BASIC11.94□□□□□ -0.5
NKX6-2Q9C056 CTTN-202ENST00000346329 3272 ntAPPRIS P3 TSL 1 (best) BASIC11.94□□□□□ -0.5
NKX6-2Q9C056 CARS-214ENST00000529772 2637 ntTSL 2 BASIC11.94□□□□□ -0.5
NKX6-2Q9C056 HFE2-204ENST00000475797 1381 ntTSL 2 BASIC11.94□□□□□ -0.5
NKX6-2Q9C056 MX1-218ENST00000619682 1980 ntTSL 5 BASIC11.94□□□□□ -0.5
NKX6-2Q9C056 EGFR-AS1-201ENST00000442411 2806 ntTSL 2 BASIC11.94□□□□□ -0.5
NKX6-2Q9C056 FAM3D-201ENST00000358781 1319 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
NKX6-2Q9C056 DNAJC14-202ENST00000317287 2774 ntAPPRIS P1 TSL 2 BASIC11.94□□□□□ -0.5
NKX6-2Q9C056 AC060814.4-201ENST00000594169 2163 ntBASIC11.94□□□□□ -0.5
NKX6-2Q9C056 MIR9-3HG-201ENST00000536780 4778 ntTSL 3 BASIC11.94□□□□□ -0.5
NKX6-2Q9C056 HOTTIP-203ENST00000521028 3345 ntTSL 5 BASIC11.94□□□□□ -0.5
NKX6-2Q9C056 ANKRD36BP2-202ENST00000421951 1899 ntTSL 3 BASIC11.94□□□□□ -0.5
NKX6-2Q9C056 NUMB-216ENST00000555394 3037 ntAPPRIS ALT1 TSL 1 (best) BASIC11.94□□□□□ -0.5
NKX6-2Q9C056 AC007787.1-201ENST00000588095 1583 ntBASIC11.94□□□□□ -0.5
NKX6-2Q9C056 ZNF76-202ENST00000339411 2447 ntTSL 1 (best) BASIC11.94□□□□□ -0.5
NKX6-2Q9C056 AC092117.1-201ENST00000621230 3250 ntBASIC11.94□□□□□ -0.5
NKX6-2Q9C056 GUK1-203ENST00000366718 1275 ntAPPRIS P3 TSL 3 BASIC11.94□□□□□ -0.5
NKX6-2Q9C056 FAM99B-201ENST00000382166 1067 ntTSL 5 BASIC11.94□□□□□ -0.5
NKX6-2Q9C056 CRYGEP-201ENST00000412192 528 ntBASIC11.94□□□□□ -0.5
NKX6-2Q9C056 LINC00398-201ENST00000414407 906 ntTSL 2 BASIC11.94□□□□□ -0.5
NKX6-2Q9C056 RHOQP3-201ENST00000437982 621 ntBASIC11.94□□□□□ -0.5
NKX6-2Q9C056 RNPS1P1-201ENST00000507437 918 ntBASIC11.94□□□□□ -0.5
NKX6-2Q9C056 POLD4-207ENST00000531239 584 ntTSL 2 BASIC11.94□□□□□ -0.5
Retrieved 100 of 98,524 protein–RNA pairs in 43.4 ms