Protein–RNA interactions for Protein: Q9BZI7

UPF3B, Regulator of nonsense transcripts 3B, humanhuman

Known RBP Predictions only

Length 483 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UPF3BQ9BZI7 GATD1-203ENST00000397472 790 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
UPF3BQ9BZI7 ATP5J-205ENST00000400094 589 ntAPPRIS P1 TSL 2 BASIC17.59■□□□□ 0.41
UPF3BQ9BZI7 PEX13-202ENST00000401576 1108 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
UPF3BQ9BZI7 AC073130.2-202ENST00000444244 842 ntTSL 3 BASIC17.59■□□□□ 0.41
UPF3BQ9BZI7 SIRPB2-203ENST00000444444 884 ntTSL 2 BASIC17.59■□□□□ 0.41
UPF3BQ9BZI7 RN7SL837P-201ENST00000463010 287 ntBASIC17.59■□□□□ 0.41
UPF3BQ9BZI7 AP001889.1-201ENST00000525414 633 ntBASIC17.59■□□□□ 0.41
UPF3BQ9BZI7 AP003385.5-201ENST00000533876 555 ntTSL 4 BASIC17.59■□□□□ 0.41
UPF3BQ9BZI7 HIRIP3-204ENST00000564026 988 ntTSL 2 BASIC17.59■□□□□ 0.41
UPF3BQ9BZI7 AP000439.4-201ENST00000567742 664 ntTSL 3 BASIC17.59■□□□□ 0.41
UPF3BQ9BZI7 TUBB6-213ENST00000591909 1017 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
UPF3BQ9BZI7 HNRNPA0-201ENST00000314940 8726 ntAPPRIS P1 BASIC17.59■□□□□ 0.41
UPF3BQ9BZI7 RALGPS2-204ENST00000367635 5834 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
UPF3BQ9BZI7 SP8-203ENST00000617581 3496 ntAPPRIS ALT2 TSL 1 (best) BASIC17.59■□□□□ 0.41
UPF3BQ9BZI7 CBX6-201ENST00000216083 3191 ntAPPRIS ALT2 TSL 2 BASIC17.59■□□□□ 0.41
UPF3BQ9BZI7 PAX3-203ENST00000344493 3109 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
UPF3BQ9BZI7 PPP1CB-203ENST00000395366 4893 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
UPF3BQ9BZI7 MKNK1-204ENST00000371946 2719 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
UPF3BQ9BZI7 WDR77-201ENST00000235090 2576 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
UPF3BQ9BZI7 WSCD1-201ENST00000317744 5819 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
UPF3BQ9BZI7 IL17RD-203ENST00000463523 2348 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
UPF3BQ9BZI7 CTXND1-201ENST00000560778 6890 ntAPPRIS P1 TSL 3 BASIC17.59■□□□□ 0.41
UPF3BQ9BZI7 EXOC7-213ENST00000467929 2260 ntTSL 2 BASIC17.59■□□□□ 0.41
UPF3BQ9BZI7 NTRK2-202ENST00000304053 8226 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
UPF3BQ9BZI7 SCUBE2-201ENST00000309263 3727 ntTSL 5 BASIC17.59■□□□□ 0.41
UPF3BQ9BZI7 TTLL4-212ENST00000457313 3723 ntTSL 2 BASIC17.59■□□□□ 0.41
UPF3BQ9BZI7 RHOH-220ENST00000615083 2156 ntAPPRIS P1 TSL 4 BASIC17.59■□□□□ 0.41
UPF3BQ9BZI7 LRRC17-202ENST00000339431 1963 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
UPF3BQ9BZI7 TMEM212-201ENST00000334567 1881 ntAPPRIS P1 TSL 2 BASIC17.58■□□□□ 0.41
UPF3BQ9BZI7 RGMA-202ENST00000425933 3078 ntAPPRIS ALT2 TSL 5 BASIC17.58■□□□□ 0.41
UPF3BQ9BZI7 CYP20A1-203ENST00000429815 1812 ntTSL 2 BASIC17.58■□□□□ 0.41
UPF3BQ9BZI7 RBBP4-204ENST00000414241 1788 ntAPPRIS ALT1 TSL 1 (best) BASIC17.58■□□□□ 0.41
UPF3BQ9BZI7 RNF166-210ENST00000568683 1768 ntTSL 3 BASIC17.58■□□□□ 0.41
UPF3BQ9BZI7 PRSS30P-201ENST00000390681 2881 ntTSL 1 (best) BASIC17.58■□□□□ 0.41
UPF3BQ9BZI7 C12orf49-201ENST00000261318 8404 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
UPF3BQ9BZI7 FUK-202ENST00000378912 3925 ntTSL 2 BASIC17.58■□□□□ 0.41
UPF3BQ9BZI7 UHRF1-204ENST00000616255 2661 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
UPF3BQ9BZI7 PTPRA-201ENST00000216877 3725 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
UPF3BQ9BZI7 C12orf76-209ENST00000615315 1580 ntTSL 5 BASIC17.58■□□□□ 0.41
UPF3BQ9BZI7 DMAC2-204ENST00000438807 1454 ntTSL 1 (best) BASIC17.58■□□□□ 0.41
UPF3BQ9BZI7 AC020910.6-201ENST00000623084 1459 ntBASIC17.58■□□□□ 0.41
UPF3BQ9BZI7 PDZD7-206ENST00000619208 4135 ntAPPRIS P1 TSL 5 BASIC17.58■□□□□ 0.4
UPF3BQ9BZI7 ATE1-201ENST00000224652 4930 ntAPPRIS P5 TSL 1 (best) BASIC17.58■□□□□ 0.4
UPF3BQ9BZI7 PIP4K2A-201ENST00000323883 1319 ntTSL 2 BASIC17.58■□□□□ 0.4
UPF3BQ9BZI7 TAP2-201ENST00000374897 5684 ntAPPRIS P2 TSL 1 (best) BASIC17.58■□□□□ 0.4
UPF3BQ9BZI7 IFI27L1-201ENST00000393115 674 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
UPF3BQ9BZI7 IFNL3-201ENST00000413851 656 ntAPPRIS P2 TSL 1 (best) BASIC17.58■□□□□ 0.4
UPF3BQ9BZI7 RPL28-203ENST00000428193 573 ntTSL 2 BASIC17.58■□□□□ 0.4
UPF3BQ9BZI7 RPL28-204ENST00000431533 590 ntTSL 2 BASIC17.58■□□□□ 0.4
UPF3BQ9BZI7 AC011495.1-201ENST00000498085 584 ntBASIC17.58■□□□□ 0.4
UPF3BQ9BZI7 IL32-218ENST00000530890 774 ntAPPRIS ALT2 TSL 2 BASIC17.58■□□□□ 0.4
UPF3BQ9BZI7 DRAP1-208ENST00000532933 751 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
UPF3BQ9BZI7 ZSCAN2-213ENST00000541040 965 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
UPF3BQ9BZI7 VPS18-202ENST00000558474 873 ntTSL 3 BASIC17.58■□□□□ 0.4
UPF3BQ9BZI7 RPL28-207ENST00000558815 616 ntTSL 2 BASIC17.58■□□□□ 0.4
UPF3BQ9BZI7 NAA38-206ENST00000576384 424 ntTSL 2 BASIC17.58■□□□□ 0.4
UPF3BQ9BZI7 STRADA-221ENST00000582137 1238 ntTSL 2 BASIC17.58■□□□□ 0.4
UPF3BQ9BZI7 ECM1P1-201ENST00000604092 1279 ntBASIC17.58■□□□□ 0.4
UPF3BQ9BZI7 SPATA21-206ENST00000612240 603 ntTSL 5 BASIC17.58■□□□□ 0.4
UPF3BQ9BZI7 AP001002.3-201ENST00000623482 206 ntBASIC17.58■□□□□ 0.4
UPF3BQ9BZI7 AC044839.1-204ENST00000634777 1058 ntTSL 5 BASIC17.58■□□□□ 0.4
UPF3BQ9BZI7 HSPA8P5-201ENST00000456928 2069 ntBASIC17.58■□□□□ 0.4
UPF3BQ9BZI7 PTPRU-205ENST00000460170 5337 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
UPF3BQ9BZI7 IGDCC3-201ENST00000327987 4479 ntAPPRIS P2 TSL 1 (best) BASIC17.58■□□□□ 0.4
UPF3BQ9BZI7 PCDHGA3-203ENST00000619750 2695 ntAPPRIS ALT2 BASIC17.58■□□□□ 0.4
UPF3BQ9BZI7 FMO5-201ENST00000254090 2632 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
UPF3BQ9BZI7 LINC02076-201ENST00000577684 1871 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
UPF3BQ9BZI7 SMG9-211ENST00000601170 2387 ntTSL 2 BASIC17.58■□□□□ 0.4
UPF3BQ9BZI7 REM1-201ENST00000201979 1665 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
UPF3BQ9BZI7 C9orf139-202ENST00000623196 4990 ntTSL 2 BASIC17.58■□□□□ 0.4
UPF3BQ9BZI7 AC089987.1-201ENST00000551654 2209 ntBASIC17.57■□□□□ 0.4
UPF3BQ9BZI7 ATL2-210ENST00000452935 2199 ntTSL 2 BASIC17.57■□□□□ 0.4
UPF3BQ9BZI7 LRRFIP1-203ENST00000308482 2775 ntAPPRIS ALT2 TSL 1 (best) BASIC17.57■□□□□ 0.4
UPF3BQ9BZI7 CBX3-201ENST00000337620 2128 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
UPF3BQ9BZI7 VRK3-217ENST00000599538 2126 ntAPPRIS P3 TSL 1 (best) BASIC17.57■□□□□ 0.4
UPF3BQ9BZI7 AP3M2-201ENST00000174653 3661 ntAPPRIS P1 TSL 5 BASIC17.57■□□□□ 0.4
UPF3BQ9BZI7 AC139712.1-201ENST00000378256 1875 ntBASIC17.57■□□□□ 0.4
UPF3BQ9BZI7 TXNDC5-204ENST00000473453 1301 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
UPF3BQ9BZI7 C1QTNF9-201ENST00000332018 1830 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
UPF3BQ9BZI7 KRTAP19-7-201ENST00000334849 440 ntAPPRIS P1 BASIC17.57■□□□□ 0.4
UPF3BQ9BZI7 IFITM3-201ENST00000399808 808 ntAPPRIS P2 TSL 1 (best) BASIC17.57■□□□□ 0.4
UPF3BQ9BZI7 MIR1909-201ENST00000411312 80 ntBASIC17.57■□□□□ 0.4
UPF3BQ9BZI7 AP006294.1-201ENST00000415407 339 ntBASIC17.57■□□□□ 0.4
UPF3BQ9BZI7 AL590640.2-201ENST00000457038 527 ntBASIC17.57■□□□□ 0.4
UPF3BQ9BZI7 AAMDC-206ENST00000526415 579 ntAPPRIS P1 TSL 2 BASIC17.57■□□□□ 0.4
UPF3BQ9BZI7 ZFPL1-207ENST00000526791 384 ntTSL 3 BASIC17.57■□□□□ 0.4
UPF3BQ9BZI7 ACRV1-202ENST00000527795 782 ntAPPRIS ALT2 TSL 2 BASIC17.57■□□□□ 0.4
UPF3BQ9BZI7 AP006333.2-201ENST00000544948 732 ntTSL 3 BASIC17.57■□□□□ 0.4
UPF3BQ9BZI7 AC103988.2-201ENST00000561804 725 ntBASIC17.57■□□□□ 0.4
UPF3BQ9BZI7 AC111170.2-201ENST00000585369 768 ntTSL 3 BASIC17.57■□□□□ 0.4
UPF3BQ9BZI7 ETV2-208ENST00000621247 941 ntTSL 5 BASIC17.57■□□□□ 0.4
UPF3BQ9BZI7 FAF1-202ENST00000396153 6817 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
UPF3BQ9BZI7 SUCO-204ENST00000608151 5790 ntTSL 5 BASIC17.57■□□□□ 0.4
UPF3BQ9BZI7 HNRNPUL1-205ENST00000593587 2725 ntTSL 2 BASIC17.57■□□□□ 0.4
UPF3BQ9BZI7 CHIT1-202ENST00000367229 2246 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
UPF3BQ9BZI7 SGK2-204ENST00000373100 2225 ntAPPRIS P1 TSL 5 BASIC17.57■□□□□ 0.4
UPF3BQ9BZI7 ALOX15-201ENST00000293761 2677 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
UPF3BQ9BZI7 KDELC2-201ENST00000323468 4312 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
UPF3BQ9BZI7 SBF1P1-201ENST00000444527 5631 ntBASIC17.57■□□□□ 0.4
UPF3BQ9BZI7 AGPS-201ENST00000264167 7764 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Retrieved 100 of 98,524 protein–RNA pairs in 84.4 ms