Protein–RNA interactions for Protein: Q9BZ76

CNTNAP3, Contactin-associated protein-like 3, humanhuman

Predictions only

Length 1,288 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CNTNAP3Q9BZ76 RN7SKP109-201ENST00000410592 316 ntBASIC14.01□□□□□ -0.17
CNTNAP3Q9BZ76 AL035413.1-201ENST00000437898 507 ntTSL 2 BASIC14.01□□□□□ -0.17
CNTNAP3Q9BZ76 AL356000.1-201ENST00000441073 1238 ntBASIC14.01□□□□□ -0.17
CNTNAP3Q9BZ76 AL451000.1-201ENST00000451300 1186 ntBASIC14.01□□□□□ -0.17
CNTNAP3Q9BZ76 AL162377.1-202ENST00000456688 1181 ntTSL 2 BASIC14.01□□□□□ -0.17
CNTNAP3Q9BZ76 RN7SL363P-201ENST00000482412 273 ntBASIC14.01□□□□□ -0.17
CNTNAP3Q9BZ76 AC022616.1-201ENST00000518688 554 ntBASIC14.01□□□□□ -0.17
CNTNAP3Q9BZ76 AC136601.1-201ENST00000521803 666 ntTSL 3 BASIC14.01□□□□□ -0.17
CNTNAP3Q9BZ76 ORAOV1-205ENST00000535657 709 ntAPPRIS P2 TSL 3 BASIC14.01□□□□□ -0.17
CNTNAP3Q9BZ76 ZNF772-207ENST00000601768 482 ntTSL 3 BASIC14.01□□□□□ -0.17
CNTNAP3Q9BZ76 AC010976.2-201ENST00000609697 852 ntBASIC14.01□□□□□ -0.17
CNTNAP3Q9BZ76 OAZ3-207ENST00000627780 850 ntTSL 5 BASIC14.01□□□□□ -0.17
CNTNAP3Q9BZ76 IDH3A-224ENST00000629769 114 ntTSL 5 BASIC14.01□□□□□ -0.17
CNTNAP3Q9BZ76 AL137793.2-201ENST00000632635 659 ntTSL 3 BASIC14.01□□□□□ -0.17
CNTNAP3Q9BZ76 OAZ3-209ENST00000635322 745 ntTSL 5 BASIC14.01□□□□□ -0.17
CNTNAP3Q9BZ76 STK4-AS1-201ENST00000434401 2065 ntTSL 2 BASIC14.01□□□□□ -0.17
CNTNAP3Q9BZ76 CDIP1-209ENST00000567695 2062 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
CNTNAP3Q9BZ76 ME2P1-201ENST00000426028 1970 ntBASIC14.01□□□□□ -0.17
CNTNAP3Q9BZ76 NTRK2-202ENST00000304053 8226 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
CNTNAP3Q9BZ76 AC144831.1-201ENST00000573312 2656 ntBASIC14.01□□□□□ -0.17
CNTNAP3Q9BZ76 FTSJ1-202ENST00000348411 1892 ntAPPRIS P4 TSL 1 (best) BASIC14.01□□□□□ -0.17
CNTNAP3Q9BZ76 SRPX-201ENST00000378533 1874 ntAPPRIS P3 TSL 1 (best) BASIC14.01□□□□□ -0.17
CNTNAP3Q9BZ76 AXIN2-202ENST00000375702 2541 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
CNTNAP3Q9BZ76 HSD17B6-205ENST00000554643 1751 ntAPPRIS P1 TSL 5 BASIC14.01□□□□□ -0.17
CNTNAP3Q9BZ76 CXorf40A-209ENST00000441248 2411 ntAPPRIS P3 TSL 1 (best) BASIC14.01□□□□□ -0.17
CNTNAP3Q9BZ76 TMC4-209ENST00000617472 2413 ntAPPRIS ALT2 TSL 1 (best) BASIC14.01□□□□□ -0.17
CNTNAP3Q9BZ76 LMX1B-201ENST00000355497 5809 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
CNTNAP3Q9BZ76 GOLGA2P3Y-201ENST00000416946 1653 ntBASIC14.01□□□□□ -0.17
CNTNAP3Q9BZ76 TPD52L2-205ENST00000352482 2339 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
CNTNAP3Q9BZ76 TPD52L2-210ENST00000615907 2310 ntTSL 4 BASIC14.01□□□□□ -0.17
CNTNAP3Q9BZ76 ZNF574-202ENST00000359044 2940 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
CNTNAP3Q9BZ76 CDKN1A-203ENST00000405375 2267 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
CNTNAP3Q9BZ76 SERPINA1-209ENST00000449399 1559 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
CNTNAP3Q9BZ76 ZXDC-202ENST00000389709 3405 ntAPPRIS P4 TSL 1 (best) BASIC14□□□□□ -0.17
CNTNAP3Q9BZ76 TSC1-202ENST00000403810 1507 ntTSL 1 (best) BASIC14□□□□□ -0.17
CNTNAP3Q9BZ76 TMEM184C-204ENST00000508208 1528 ntTSL 1 (best) BASIC14□□□□□ -0.17
CNTNAP3Q9BZ76 CNPPD1-202ENST00000409789 2073 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
CNTNAP3Q9BZ76 ALDOA-226ENST00000569798 1499 ntTSL 2 BASIC14□□□□□ -0.17
CNTNAP3Q9BZ76 CR382285.1-201ENST00000625012 1485 ntTSL 1 (best) BASIC14□□□□□ -0.17
CNTNAP3Q9BZ76 UBTF-201ENST00000302904 4997 ntAPPRIS P1 TSL 2 BASIC14□□□□□ -0.17
CNTNAP3Q9BZ76 CDSN-202ENST00000376288 2552 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
CNTNAP3Q9BZ76 PTOV1-214ENST00000600603 1443 ntTSL 1 (best) BASIC14□□□□□ -0.17
CNTNAP3Q9BZ76 AC100861.1-202ENST00000500853 1970 ntTSL 2 BASIC14□□□□□ -0.17
CNTNAP3Q9BZ76 SIGLEC6-204ENST00000391797 1391 ntTSL 1 (best) BASIC14□□□□□ -0.17
CNTNAP3Q9BZ76 ID2-203ENST00000396290 1362 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
CNTNAP3Q9BZ76 LINC00668-206ENST00000581725 1902 ntTSL 2 BASIC14□□□□□ -0.17
CNTNAP3Q9BZ76 LONRF3-201ENST00000304778 2989 ntTSL 1 (best) BASIC14□□□□□ -0.17
CNTNAP3Q9BZ76 ZNF516-201ENST00000443185 8118 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
CNTNAP3Q9BZ76 AL161772.1-201ENST00000610494 4412 ntBASIC14□□□□□ -0.17
CNTNAP3Q9BZ76 BAX-205ENST00000391871 687 ntTSL 5 BASIC14□□□□□ -0.17
CNTNAP3Q9BZ76 THYN1-203ENST00000392594 943 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
CNTNAP3Q9BZ76 TRPM2-AS-201ENST00000423310 586 ntTSL 1 (best) BASIC14□□□□□ -0.17
CNTNAP3Q9BZ76 EEF1DP5-201ENST00000431410 772 ntBASIC14□□□□□ -0.17
CNTNAP3Q9BZ76 AC013448.2-201ENST00000440341 787 ntTSL 5 BASIC14□□□□□ -0.17
CNTNAP3Q9BZ76 CITED1-209ENST00000453707 998 ntAPPRIS ALT2 TSL 3 BASIC14□□□□□ -0.17
CNTNAP3Q9BZ76 MESTP3-201ENST00000503460 968 ntBASIC14□□□□□ -0.17
CNTNAP3Q9BZ76 ADM-203ENST00000525063 867 ntAPPRIS P1 TSL 3 BASIC14□□□□□ -0.17
CNTNAP3Q9BZ76 USB1-205ENST00000561743 1135 ntTSL 3 BASIC14□□□□□ -0.17
CNTNAP3Q9BZ76 AC009065.6-201ENST00000568795 456 ntTSL 2 BASIC14□□□□□ -0.17
CNTNAP3Q9BZ76 NRN1L-202ENST00000576147 681 ntAPPRIS ALT2 TSL 2 BASIC14□□□□□ -0.17
CNTNAP3Q9BZ76 AC020904.3-201ENST00000624199 442 ntBASIC14□□□□□ -0.17
CNTNAP3Q9BZ76 TBC1D22A-205ENST00000406733 2267 ntTSL 2 BASIC14□□□□□ -0.17
CNTNAP3Q9BZ76 TRIM24-202ENST00000415680 3799 ntAPPRIS ALT2 TSL 1 (best) BASIC14□□□□□ -0.17
CNTNAP3Q9BZ76 SELENOV-201ENST00000335426 1704 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
CNTNAP3Q9BZ76 WDR74-205ENST00000525752 1724 ntTSL 5 BASIC14□□□□□ -0.17
CNTNAP3Q9BZ76 SELENOV-205ENST00000622070 1704 ntTSL 5 BASIC14□□□□□ -0.17
CNTNAP3Q9BZ76 CYP4F11-203ENST00000402119 3161 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
CNTNAP3Q9BZ76 STAT5B-201ENST00000293328 5103 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
CNTNAP3Q9BZ76 RCN2-203ENST00000394885 6347 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
CNTNAP3Q9BZ76 RPS9-205ENST00000402367 1617 ntTSL 3 BASIC14□□□□□ -0.17
CNTNAP3Q9BZ76 CKMT2-202ENST00000424301 1637 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
CNTNAP3Q9BZ76 AL158070.2-201ENST00000623713 1621 ntBASIC14□□□□□ -0.17
CNTNAP3Q9BZ76 CBSL-201ENST00000398168 2514 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
CNTNAP3Q9BZ76 CANX-201ENST00000247461 4260 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
CNTNAP3Q9BZ76 UBXN11-202ENST00000357089 1555 ntAPPRIS ALT2 TSL 5 BASIC14□□□□□ -0.17
CNTNAP3Q9BZ76 SLC5A7-202ENST00000409059 2032 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
CNTNAP3Q9BZ76 CIAPIN1-209ENST00000567518 2016 ntTSL 1 (best) BASIC14□□□□□ -0.17
CNTNAP3Q9BZ76 LATS2-201ENST00000382592 5511 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
CNTNAP3Q9BZ76 AC134407.2-201ENST00000625089 1978 ntBASIC14□□□□□ -0.17
CNTNAP3Q9BZ76 SYNE3-203ENST00000554873 2826 ntTSL 5 BASIC14□□□□□ -0.17
CNTNAP3Q9BZ76 CHRFAM7A-203ENST00000401522 1913 ntTSL 1 (best) BASIC14□□□□□ -0.17
CNTNAP3Q9BZ76 WASHC2C-208ENST00000537517 4417 ntAPPRIS ALT2 TSL 2 BASIC13.99□□□□□ -0.17
CNTNAP3Q9BZ76 MMP25-201ENST00000336577 3554 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
CNTNAP3Q9BZ76 RET-202ENST00000355710 5659 ntAPPRIS P3 TSL 5 BASIC13.99□□□□□ -0.17
CNTNAP3Q9BZ76 AKAP1-202ENST00000337714 3970 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
CNTNAP3Q9BZ76 CCDC85A-201ENST00000407595 3982 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
CNTNAP3Q9BZ76 WIPF3-202ENST00000409123 3491 ntAPPRIS ALT2 TSL 5 BASIC13.99□□□□□ -0.17
CNTNAP3Q9BZ76 CTSL-201ENST00000340342 1436 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
CNTNAP3Q9BZ76 KRT8P31-201ENST00000504812 1408 ntBASIC13.99□□□□□ -0.17
CNTNAP3Q9BZ76 ZNF628-203ENST00000598519 3847 ntAPPRIS P2 TSL 1 (best) BASIC13.99□□□□□ -0.17
CNTNAP3Q9BZ76 SPOP-201ENST00000347630 2965 ntAPPRIS P1 TSL 5 BASIC13.99□□□□□ -0.17
CNTNAP3Q9BZ76 FUT7-201ENST00000314412 2584 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
CNTNAP3Q9BZ76 PXN-207ENST00000536957 4112 ntAPPRIS ALT2 TSL 2 BASIC13.99□□□□□ -0.17
CNTNAP3Q9BZ76 AC010547.4-201ENST00000561754 1378 ntAPPRIS P1 TSL 5 BASIC13.99□□□□□ -0.17
CNTNAP3Q9BZ76 APOPT1-201ENST00000409074 2523 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
CNTNAP3Q9BZ76 C14orf79-205ENST00000549240 2503 ntAPPRIS ALT2 TSL 2 BASIC13.99□□□□□ -0.17
CNTNAP3Q9BZ76 TBC1D3D-201ENST00000616101 2116 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
CNTNAP3Q9BZ76 TBC1D3K-201ENST00000620247 2116 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
CNTNAP3Q9BZ76 ARHGEF5-201ENST00000056217 5544 ntAPPRIS P2 TSL 1 (best) BASIC13.99□□□□□ -0.17
CNTNAP3Q9BZ76 GGT6-204ENST00000574154 2482 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Retrieved 100 of 98,524 protein–RNA pairs in 58 ms