Protein–RNA interactions for Protein: Q99466

NOTCH4, Neurogenic locus notch homolog protein 4, humanhuman

Predictions only

Length 2,003 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NOTCH4Q99466 AC069208.1-205ENST00000456299 576 ntTSL 4 BASIC14.78□□□□□ -0.04
NOTCH4Q99466 AC108462.1-201ENST00000457467 850 ntTSL 3 BASIC14.78□□□□□ -0.04
NOTCH4Q99466 AC009487.3-201ENST00000505579 560 ntTSL 4 BASIC14.78□□□□□ -0.04
NOTCH4Q99466 AC107463.1-201ENST00000508605 667 ntTSL 3 BASIC14.78□□□□□ -0.04
NOTCH4Q99466 AC087269.1-202ENST00000519147 400 ntTSL 3 BASIC14.78□□□□□ -0.04
NOTCH4Q99466 TMEM126A-203ENST00000528105 656 ntTSL 2 BASIC14.78□□□□□ -0.04
NOTCH4Q99466 CMTM1-209ENST00000528324 749 ntAPPRIS ALT2 TSL 1 (best) BASIC14.78□□□□□ -0.04
NOTCH4Q99466 CMTM1-217ENST00000533666 493 ntAPPRIS ALT2 TSL 1 (best) BASIC14.78□□□□□ -0.04
NOTCH4Q99466 TNNI1-205ENST00000555948 580 ntTSL 5 BASIC14.78□□□□□ -0.04
NOTCH4Q99466 LINC02285-201ENST00000557121 943 ntTSL 2 BASIC14.78□□□□□ -0.04
NOTCH4Q99466 USB1-205ENST00000561743 1135 ntTSL 3 BASIC14.78□□□□□ -0.04
NOTCH4Q99466 COX5A-205ENST00000568517 582 ntTSL 3 BASIC14.78□□□□□ -0.04
NOTCH4Q99466 STRADA-221ENST00000582137 1238 ntTSL 2 BASIC14.78□□□□□ -0.04
NOTCH4Q99466 EFR3A-201ENST00000254624 5438 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
NOTCH4Q99466 SEC13-202ENST00000350697 1425 ntAPPRIS P2 TSL 1 (best) BASIC14.78□□□□□ -0.04
NOTCH4Q99466 PLCH2-203ENST00000378486 4837 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
NOTCH4Q99466 PLCH2-204ENST00000419816 4837 ntAPPRIS P1 TSL 5 BASIC14.78□□□□□ -0.04
NOTCH4Q99466 PDE4C-204ENST00000539010 1699 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
NOTCH4Q99466 ZNF12-204ENST00000405858 5051 ntAPPRIS P4 TSL 1 (best) BASIC14.78□□□□□ -0.04
NOTCH4Q99466 ARPP19-201ENST00000249822 5301 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
NOTCH4Q99466 ANO10-213ENST00000451430 2019 ntTSL 2 BASIC14.78□□□□□ -0.04
NOTCH4Q99466 ORMDL3-202ENST00000394169 2230 ntAPPRIS P1 TSL 2 BASIC14.77□□□□□ -0.04
NOTCH4Q99466 ICA1-201ENST00000265577 2309 ntAPPRIS ALT1 TSL 5 BASIC14.77□□□□□ -0.04
NOTCH4Q99466 FOXP3-203ENST00000376207 2382 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
NOTCH4Q99466 CBS-204ENST00000398165 2605 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
NOTCH4Q99466 CDK11A-201ENST00000356200 2653 ntTSL 5 BASIC14.77□□□□□ -0.04
NOTCH4Q99466 SPTBN4-202ENST00000352632 8676 ntAPPRIS P2 TSL 5 BASIC14.77□□□□□ -0.04
NOTCH4Q99466 SPTBN4-204ENST00000392025 8671 ntAPPRIS ALT1 TSL 5 BASIC14.77□□□□□ -0.04
NOTCH4Q99466 VKORC1L1-201ENST00000360768 5899 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
NOTCH4Q99466 SMPD3-201ENST00000219334 5453 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
NOTCH4Q99466 TMEM14C-201ENST00000229563 1113 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
NOTCH4Q99466 LRRTM1-201ENST00000295057 2599 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
NOTCH4Q99466 MBD3L3-201ENST00000333843 775 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
NOTCH4Q99466 JKAMP-202ENST00000356057 2524 ntTSL 1 (best) BASIC14.77□□□□□ -0.04
NOTCH4Q99466 COX20P1-201ENST00000366529 357 ntBASIC14.77□□□□□ -0.04
NOTCH4Q99466 SLC35C2-204ENST00000372230 2246 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
NOTCH4Q99466 CAMK2A-203ENST00000398376 1493 ntTSL 1 (best) BASIC14.77□□□□□ -0.04
NOTCH4Q99466 AC004973.1-201ENST00000413240 635 ntTSL 3 BASIC14.77□□□□□ -0.04
NOTCH4Q99466 SF3B1-204ENST00000414963 651 ntTSL 1 (best) BASIC14.77□□□□□ -0.04
NOTCH4Q99466 IFI35-203ENST00000415816 1241 ntAPPRIS ALT2 TSL 5 BASIC14.77□□□□□ -0.04
NOTCH4Q99466 C12orf65-204ENST00000429587 1326 ntAPPRIS P2 TSL 2 BASIC14.77□□□□□ -0.04
NOTCH4Q99466 IFI35-204ENST00000438323 1232 ntAPPRIS P3 TSL 1 (best) BASIC14.77□□□□□ -0.04
NOTCH4Q99466 AC010234.1-201ENST00000494599 870 ntBASIC14.77□□□□□ -0.04
NOTCH4Q99466 AC233724.6-201ENST00000503184 1088 ntAPPRIS P1 BASIC14.77□□□□□ -0.04
NOTCH4Q99466 AC022447.6-201ENST00000515522 438 ntBASIC14.77□□□□□ -0.04
NOTCH4Q99466 AC105219.2-201ENST00000527908 299 ntTSL 4 BASIC14.77□□□□□ -0.04
NOTCH4Q99466 PDXDC2P-206ENST00000534700 1315 ntBASIC14.77□□□□□ -0.04
NOTCH4Q99466 YPEL4-209ENST00000534711 889 ntAPPRIS P1 TSL 5 BASIC14.77□□□□□ -0.04
NOTCH4Q99466 AC136624.2-201ENST00000574883 542 ntTSL 3 BASIC14.77□□□□□ -0.04
NOTCH4Q99466 C17orf62-216ENST00000578919 841 ntAPPRIS P1 TSL 3 BASIC14.77□□□□□ -0.04
NOTCH4Q99466 ZNF286A-212ENST00000580259 527 ntTSL 4 BASIC14.77□□□□□ -0.04
NOTCH4Q99466 THY1-209ENST00000580275 578 ntTSL 3 BASIC14.77□□□□□ -0.04
NOTCH4Q99466 RPS5-204ENST00000598098 536 ntTSL 2 BASIC14.77□□□□□ -0.04
NOTCH4Q99466 USP39-220ENST00000613444 2161 ntTSL 2 BASIC14.77□□□□□ -0.04
NOTCH4Q99466 FO393412.1-201ENST00000619841 382 ntBASIC14.77□□□□□ -0.04
NOTCH4Q99466 AC011498.7-201ENST00000624986 2027 ntBASIC14.77□□□□□ -0.04
NOTCH4Q99466 AL451007.2-201ENST00000632004 563 ntBASIC14.77□□□□□ -0.04
NOTCH4Q99466 CHSY3-201ENST00000305031 3850 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
NOTCH4Q99466 WDR5-201ENST00000358625 3151 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
NOTCH4Q99466 SLC8B1-201ENST00000202831 2975 ntAPPRIS P1 TSL 5 BASIC14.77□□□□□ -0.05
NOTCH4Q99466 PTPA-203ENST00000348141 2737 ntTSL 5 BASIC14.77□□□□□ -0.05
NOTCH4Q99466 PTPA-207ENST00000393370 2737 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
NOTCH4Q99466 C14orf180-203ENST00000557649 2551 ntAPPRIS P3 TSL 1 (best) BASIC14.77□□□□□ -0.05
NOTCH4Q99466 GGT6-204ENST00000574154 2482 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
NOTCH4Q99466 EDEM2-202ENST00000374492 1919 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
NOTCH4Q99466 APOF-201ENST00000398189 1715 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
NOTCH4Q99466 NCF4-202ENST00000397147 1641 ntTSL 1 (best) BASIC14.77□□□□□ -0.05
NOTCH4Q99466 CDC25B-203ENST00000344256 3071 ntTSL 2 BASIC14.77□□□□□ -0.05
NOTCH4Q99466 IRF8-201ENST00000268638 3030 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
NOTCH4Q99466 BFAR-203ENST00000562442 1414 ntTSL 2 BASIC14.77□□□□□ -0.05
NOTCH4Q99466 LEMD1-205ENST00000367154 786 ntTSL 2 BASIC14.76□□□□□ -0.05
NOTCH4Q99466 PLAC9-203ENST00000372270 534 ntAPPRIS ALT2 TSL 2 BASIC14.76□□□□□ -0.05
NOTCH4Q99466 TRBV4-1-201ENST00000390357 373 ntAPPRIS P1 BASIC14.76□□□□□ -0.05
NOTCH4Q99466 TRBV4-2-201ENST00000390392 455 ntAPPRIS P1 BASIC14.76□□□□□ -0.05
NOTCH4Q99466 OR52M2P-201ENST00000414298 959 ntBASIC14.76□□□□□ -0.05
NOTCH4Q99466 KRT17P4-201ENST00000429445 819 ntBASIC14.76□□□□□ -0.05
NOTCH4Q99466 RPL35P9-201ENST00000446059 350 ntBASIC14.76□□□□□ -0.05
NOTCH4Q99466 CHCHD2P2-201ENST00000503744 321 ntBASIC14.76□□□□□ -0.05
NOTCH4Q99466 RNA5SP406-201ENST00000516106 112 ntBASIC14.76□□□□□ -0.05
NOTCH4Q99466 ZNF586-204ENST00000598183 603 ntTSL 5 BASIC14.76□□□□□ -0.05
NOTCH4Q99466 FXYD3-204ENST00000603181 758 ntAPPRIS P1 TSL 3 BASIC14.76□□□□□ -0.05
NOTCH4Q99466 HPX-213ENST00000615166 826 ntTSL 5 BASIC14.76□□□□□ -0.05
NOTCH4Q99466 AC091769.1-201ENST00000619576 568 ntBASIC14.76□□□□□ -0.05
NOTCH4Q99466 ZNF575-202ENST00000458714 2285 ntTSL 2 BASIC14.76□□□□□ -0.05
NOTCH4Q99466 CBX6-201ENST00000216083 3191 ntAPPRIS ALT2 TSL 2 BASIC14.76□□□□□ -0.05
NOTCH4Q99466 SAP130-203ENST00000357702 4173 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
NOTCH4Q99466 GOLGA5-201ENST00000163416 2969 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
NOTCH4Q99466 AC025674.2-201ENST00000522622 2971 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
NOTCH4Q99466 ABHD16A-202ENST00000440843 1906 ntTSL 2 BASIC14.76□□□□□ -0.05
NOTCH4Q99466 TACC3-212ENST00000612220 1756 ntTSL 5 BASIC14.76□□□□□ -0.05
NOTCH4Q99466 FAM131B-206ENST00000443739 4382 ntAPPRIS ALT1 TSL 1 (best) BASIC14.76□□□□□ -0.05
NOTCH4Q99466 AC010255.3-203ENST00000509403 1727 ntAPPRIS P1 TSL 2 BASIC14.76□□□□□ -0.05
NOTCH4Q99466 XPNPEP1-218ENST00000502935 2539 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
NOTCH4Q99466 DTX3-202ENST00000548198 3199 ntAPPRIS P3 TSL 2 BASIC14.76□□□□□ -0.05
NOTCH4Q99466 AL672207.1-201ENST00000328462 1570 ntBASIC14.76□□□□□ -0.05
NOTCH4Q99466 GRAMD4-203ENST00000408031 2834 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
NOTCH4Q99466 DNAAF5-202ENST00000403952 1907 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
NOTCH4Q99466 TRIP10-208ENST00000596758 1920 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
NOTCH4Q99466 SULT1A1-201ENST00000314752 1162 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
NOTCH4Q99466 SYNGR1-204ENST00000381535 1295 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
Retrieved 100 of 98,524 protein–RNA pairs in 56.1 ms