Protein–RNA interactions for Protein: Q96AA3

RFT1, Protein RFT1 homolog, humanhuman

Predictions only

Length 541 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFT1Q96AA3 CIART-203ENST00000369095 1433 ntAPPRIS P3 TSL 1 (best) BASIC13.12□□□□□ -0.31
RFT1Q96AA3 LMF1-AS1-202ENST00000569574 1408 ntTSL 3 BASIC13.12□□□□□ -0.31
RFT1Q96AA3 ACOT7-210ENST00000608083 1403 ntAPPRIS ALT2 TSL 1 (best) BASIC13.12□□□□□ -0.31
RFT1Q96AA3 AC100757.3-201ENST00000622361 1406 ntBASIC13.12□□□□□ -0.31
RFT1Q96AA3 RNASE1-202ENST00000397967 1348 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
RFT1Q96AA3 AC087499.5-201ENST00000452760 1342 ntBASIC13.12□□□□□ -0.31
RFT1Q96AA3 DCAF8L2-203ENST00000545306 2013 ntAPPRIS P1 BASIC13.12□□□□□ -0.31
RFT1Q96AA3 FAM90A12P-201ENST00000519497 2375 ntBASIC13.12□□□□□ -0.31
RFT1Q96AA3 FAM90A24P-201ENST00000520792 2369 ntBASIC13.12□□□□□ -0.31
RFT1Q96AA3 ATP6V1C2-201ENST00000272238 1565 ntTSL 5 BASIC13.11□□□□□ -0.31
RFT1Q96AA3 ACOX1-201ENST00000293217 7514 ntAPPRIS P5 TSL 1 (best) BASIC13.11□□□□□ -0.31
RFT1Q96AA3 UPB1-202ENST00000382760 1928 ntTSL 5 BASIC13.11□□□□□ -0.31
RFT1Q96AA3 IKZF1-202ENST00000343574 5925 ntTSL 5 BASIC13.11□□□□□ -0.31
RFT1Q96AA3 GNAI2-201ENST00000266027 2169 ntTSL 2 BASIC13.11□□□□□ -0.31
RFT1Q96AA3 TGFB1I1-202ENST00000394858 1803 ntAPPRIS P3 TSL 1 (best) BASIC13.11□□□□□ -0.31
RFT1Q96AA3 SRPX-206ENST00000544439 1842 ntAPPRIS ALT2 TSL 2 BASIC13.11□□□□□ -0.31
RFT1Q96AA3 NFYC-205ENST00000372654 1455 ntAPPRIS P3 TSL 1 (best) BASIC13.11□□□□□ -0.31
RFT1Q96AA3 CD300LG-206ENST00000588884 1459 ntAPPRIS ALT2 TSL 2 BASIC13.11□□□□□ -0.31
RFT1Q96AA3 CD209-207ENST00000593660 1497 ntAPPRIS ALT2 TSL 1 (best) BASIC13.11□□□□□ -0.31
RFT1Q96AA3 ENAH-203ENST00000366843 2758 ntAPPRIS ALT2 TSL 1 (best) BASIC13.11□□□□□ -0.31
RFT1Q96AA3 VPS9D1-202ENST00000561976 2791 ntAPPRIS ALT2 TSL 1 (best) BASIC13.11□□□□□ -0.31
RFT1Q96AA3 FAM160A2-202ENST00000449352 3354 ntAPPRIS ALT1 TSL 1 (best) BASIC13.11□□□□□ -0.31
RFT1Q96AA3 TPGS2-202ENST00000383056 1726 ntAPPRIS ALT2 TSL 1 (best) BASIC13.11□□□□□ -0.31
RFT1Q96AA3 GHRLOS-201ENST00000439539 1708 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
RFT1Q96AA3 TNN-202ENST00000621086 4234 ntTSL 5 BASIC13.11□□□□□ -0.31
RFT1Q96AA3 NLRP7-209ENST00000592784 3269 ntAPPRIS ALT2 TSL 1 (best) BASIC13.11□□□□□ -0.31
RFT1Q96AA3 SEZ6-201ENST00000317338 4471 ntAPPRIS P4 TSL 1 (best) BASIC13.11□□□□□ -0.31
RFT1Q96AA3 SSBP2-220ENST00000615665 4465 ntTSL 5 BASIC13.11□□□□□ -0.31
RFT1Q96AA3 AC026790.1-201ENST00000399760 2941 ntTSL 2 BASIC13.11□□□□□ -0.31
RFT1Q96AA3 WDR45-240ENST00000635003 1376 ntTSL 3 BASIC13.11□□□□□ -0.31
RFT1Q96AA3 ABAT-213ENST00000567812 1959 ntTSL 2 BASIC13.11□□□□□ -0.31
RFT1Q96AA3 MX1-218ENST00000619682 1980 ntTSL 5 BASIC13.11□□□□□ -0.31
RFT1Q96AA3 LIG1-203ENST00000536218 3179 ntAPPRIS ALT2 TSL 2 BASIC13.11□□□□□ -0.31
RFT1Q96AA3 AC114271.1-201ENST00000612689 2813 ntBASIC13.11□□□□□ -0.31
RFT1Q96AA3 PIGT-202ENST00000279036 2245 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
RFT1Q96AA3 NKIRAS1-203ENST00000415901 1644 ntAPPRIS ALT1 TSL 5 BASIC13.11□□□□□ -0.31
RFT1Q96AA3 TBL3-208ENST00000615855 2472 ntTSL 5 BASIC13.11□□□□□ -0.31
RFT1Q96AA3 RIPOR1-204ENST00000428437 4152 ntAPPRIS ALT2 TSL 2 BASIC13.11□□□□□ -0.31
RFT1Q96AA3 CENPBD1-201ENST00000314994 2744 ntAPPRIS P1 BASIC13.11□□□□□ -0.31
RFT1Q96AA3 EML4-203ENST00000402711 3568 ntAPPRIS ALT2 TSL 1 (best) BASIC13.11□□□□□ -0.31
RFT1Q96AA3 SPHK2-201ENST00000245222 2963 ntAPPRIS P3 TSL 1 (best) BASIC13.11□□□□□ -0.31
RFT1Q96AA3 DUPD1-201ENST00000338487 663 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
RFT1Q96AA3 FCRLB-204ENST00000367946 1152 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
RFT1Q96AA3 PKIG-203ENST00000372887 769 ntTSL 3 BASIC13.11□□□□□ -0.31
RFT1Q96AA3 AGER-204ENST00000375067 1250 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
RFT1Q96AA3 AC091729.2-201ENST00000415656 302 ntTSL 3 BASIC13.11□□□□□ -0.31
RFT1Q96AA3 SLC25A36-204ENST00000453248 1040 ntTSL 2 BASIC13.11□□□□□ -0.31
RFT1Q96AA3 AL359815.1-201ENST00000457706 821 ntTSL 2 BASIC13.11□□□□□ -0.31
RFT1Q96AA3 SNX21-206ENST00000462307 1043 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
RFT1Q96AA3 LINC02437-201ENST00000505053 911 ntTSL 3 BASIC13.11□□□□□ -0.31
RFT1Q96AA3 AC124067.2-201ENST00000521989 510 ntTSL 2 BASIC13.11□□□□□ -0.31
RFT1Q96AA3 MRNIP-220ENST00000523084 1096 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
RFT1Q96AA3 RNASEK-207ENST00000552842 595 ntTSL 3 BASIC13.11□□□□□ -0.31
RFT1Q96AA3 JKAMP-207ENST00000554271 2137 ntTSL 2 BASIC13.11□□□□□ -0.31
RFT1Q96AA3 SDR39U1-212ENST00000555365 976 ntTSL 3 BASIC13.11□□□□□ -0.31
RFT1Q96AA3 SHBG-212ENST00000575314 1146 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
RFT1Q96AA3 LITAF-218ENST00000576036 603 ntAPPRIS P1 TSL 4 BASIC13.11□□□□□ -0.31
RFT1Q96AA3 LSM12-202ENST00000585388 942 ntTSL 3 BASIC13.11□□□□□ -0.31
RFT1Q96AA3 SEC11C-205ENST00000588875 718 ntTSL 2 BASIC13.11□□□□□ -0.31
RFT1Q96AA3 GPX4-206ENST00000588919 803 ntTSL 2 BASIC13.11□□□□□ -0.31
RFT1Q96AA3 AC247036.4-201ENST00000632099 353 ntAPPRIS P1 BASIC13.11□□□□□ -0.31
RFT1Q96AA3 AL645728.2-202ENST00000641679 227 ntBASIC13.11□□□□□ -0.31
RFT1Q96AA3 AC079781.4-201ENST00000641908 219 ntBASIC13.11□□□□□ -0.31
RFT1Q96AA3 HAL-202ENST00000538703 2637 ntTSL 2 BASIC13.11□□□□□ -0.31
RFT1Q96AA3 DDX21-202ENST00000620315 4829 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
RFT1Q96AA3 MFSD2B-201ENST00000338315 2850 ntAPPRIS ALT2 TSL 5 BASIC13.11□□□□□ -0.31
RFT1Q96AA3 CCDC57-203ENST00000392343 2896 ntAPPRIS P2 TSL 1 (best) BASIC13.11□□□□□ -0.31
RFT1Q96AA3 GRIK4-202ENST00000438375 4214 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
RFT1Q96AA3 ARID3B-206ENST00000622429 4243 ntAPPRIS ALT2 TSL 1 (best) BASIC13.11□□□□□ -0.31
RFT1Q96AA3 PRR30-201ENST00000335524 2008 ntAPPRIS P2 TSL 1 (best) BASIC13.11□□□□□ -0.31
RFT1Q96AA3 BLCAP-205ENST00000397137 2036 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
RFT1Q96AA3 PPIP5K1-209ENST00000420765 5718 ntAPPRIS ALT2 TSL 5 BASIC13.11□□□□□ -0.31
RFT1Q96AA3 CCT4-201ENST00000394440 2520 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
RFT1Q96AA3 KDM8-212ENST00000568965 1655 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
RFT1Q96AA3 HFE-202ENST00000317896 1922 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
RFT1Q96AA3 CDK20-201ENST00000325303 2175 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
RFT1Q96AA3 MICB-201ENST00000252229 2446 ntAPPRIS P3 TSL 1 (best) BASIC13.11□□□□□ -0.31
RFT1Q96AA3 PIK3R5-216ENST00000584803 2653 ntAPPRIS ALT1 TSL 5 BASIC13.11□□□□□ -0.31
RFT1Q96AA3 ZFP36L2-201ENST00000282388 3696 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
RFT1Q96AA3 GLIS3-201ENST00000324333 6667 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
RFT1Q96AA3 APAF1-202ENST00000357310 7055 ntAPPRIS ALT1 TSL 5 BASIC13.11□□□□□ -0.31
RFT1Q96AA3 GABPA-202ENST00000400075 4814 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
RFT1Q96AA3 MYH14-201ENST00000262269 3848 ntTSL 5 BASIC13.11□□□□□ -0.31
RFT1Q96AA3 FAM212B-201ENST00000357260 5980 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
RFT1Q96AA3 HYOU1-218ENST00000614668 1569 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
RFT1Q96AA3 CTSD-211ENST00000637387 1597 ntAPPRIS ALT2 TSL 5 BASIC13.11□□□□□ -0.31
RFT1Q96AA3 MX1-202ENST00000398598 2850 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
RFT1Q96AA3 FOXF1-201ENST00000262426 3516 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
RFT1Q96AA3 TMEM230-201ENST00000202834 1472 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
RFT1Q96AA3 ACTL7A-201ENST00000333999 1494 ntAPPRIS P1 BASIC13.1□□□□□ -0.31
RFT1Q96AA3 GOLGA8M-201ENST00000563027 1899 ntAPPRIS P1 TSL 5 BASIC13.1□□□□□ -0.31
RFT1Q96AA3 PTK7-203ENST00000345201 4071 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
RFT1Q96AA3 KBTBD7-201ENST00000379483 4734 ntAPPRIS P1 BASIC13.1□□□□□ -0.31
RFT1Q96AA3 PNPLA5-205ENST00000597664 2537 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
RFT1Q96AA3 ZBTB11-201ENST00000312938 6020 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
RFT1Q96AA3 LINC01271-201ENST00000441214 2250 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
RFT1Q96AA3 SNHG22-201ENST00000589499 1615 ntTSL 2 BASIC13.1□□□□□ -0.31
RFT1Q96AA3 RHOH-224ENST00000622175 2254 ntAPPRIS P1 TSL 4 BASIC13.1□□□□□ -0.31
RFT1Q96AA3 PCTP-207ENST00000576183 2680 ntTSL 3 BASIC13.1□□□□□ -0.31
RFT1Q96AA3 DNAJA4-206ENST00000446172 1399 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
Retrieved 100 of 98,524 protein–RNA pairs in 33.9 ms