Protein–RNA interactions for Protein: Q93084

ATP2A3, Sarcoplasmic/endoplasmic reticulum calcium ATPase 3, humanhuman

Predictions only

Length 1,043 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATP2A3Q93084 IMPACT-201ENST00000284202 3792 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
ATP2A3Q93084 TK1-201ENST00000301634 1628 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
ATP2A3Q93084 UBL7-AS1-203ENST00000564621 1612 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
ATP2A3Q93084 AC090826.2-201ENST00000568496 4946 ntTSL 2 BASIC15.57■□□□□ 0.08
ATP2A3Q93084 CCDC140-201ENST00000295226 1699 ntAPPRIS P2 TSL 1 (best) BASIC15.57■□□□□ 0.08
ATP2A3Q93084 PRODH2-201ENST00000301175 1677 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
ATP2A3Q93084 SELPLG-201ENST00000228463 1704 ntAPPRIS ALT2 TSL 2 BASIC15.57■□□□□ 0.08
ATP2A3Q93084 PEX11B-201ENST00000369306 1740 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
ATP2A3Q93084 SCLY-202ENST00000409736 1774 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
ATP2A3Q93084 PKIA-202ENST00000396418 4163 ntAPPRIS P1 TSL 2 BASIC15.57■□□□□ 0.08
ATP2A3Q93084 PMP22-201ENST00000312280 1810 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
ATP2A3Q93084 FOXRED1-213ENST00000532125 1825 ntAPPRIS ALT2 TSL 2 BASIC15.57■□□□□ 0.08
ATP2A3Q93084 PIP5K1C-202ENST00000537021 3326 ntAPPRIS ALT2 TSL 1 (best) BASIC15.56■□□□□ 0.08
ATP2A3Q93084 FAM114A2-215ENST00000522858 3379 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
ATP2A3Q93084 SPIN3-204ENST00000638257 4835 ntAPPRIS P1 TSL 5 BASIC15.56■□□□□ 0.08
ATP2A3Q93084 REXO1L2P-201ENST00000425429 2069 ntBASIC15.56■□□□□ 0.08
ATP2A3Q93084 LINC01010-201ENST00000431422 2069 ntTSL 2 BASIC15.56■□□□□ 0.08
ATP2A3Q93084 MAGEA8-205ENST00000542674 2084 ntAPPRIS P1 TSL 3 BASIC15.56■□□□□ 0.08
ATP2A3Q93084 PRMT9-201ENST00000322396 3528 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
ATP2A3Q93084 AP000845.1-201ENST00000581677 2131 ntBASIC15.56■□□□□ 0.08
ATP2A3Q93084 PDE7A-203ENST00000401827 3673 ntAPPRIS ALT1 TSL 1 (best) BASIC15.56■□□□□ 0.08
ATP2A3Q93084 SLC4A7-210ENST00000440156 4120 ntAPPRIS ALT2 TSL 1 (best) BASIC15.56■□□□□ 0.08
ATP2A3Q93084 DTX3L-201ENST00000296161 5868 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
ATP2A3Q93084 SEPT9-244ENST00000592420 2588 ntTSL 2 BASIC15.56■□□□□ 0.08
ATP2A3Q93084 WASHC2A-203ENST00000351071 4642 ntAPPRIS ALT2 TSL 1 (best) BASIC15.56■□□□□ 0.08
ATP2A3Q93084 STX1B-201ENST00000215095 4697 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
ATP2A3Q93084 CICP4-201ENST00000447359 2812 ntBASIC15.56■□□□□ 0.08
ATP2A3Q93084 TAF1C-216ENST00000566732 2972 ntAPPRIS ALT2 TSL 2 BASIC15.56■□□□□ 0.08
ATP2A3Q93084 E2F6-212ENST00000546212 3191 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
ATP2A3Q93084 CASC2-203ENST00000435944 3270 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
ATP2A3Q93084 TSPO-201ENST00000329563 955 ntAPPRIS P1 TSL 3 BASIC15.56■□□□□ 0.08
ATP2A3Q93084 RHCE-202ENST00000340849 1087 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
ATP2A3Q93084 BLCAP-204ENST00000397135 685 ntAPPRIS P1 TSL 4 BASIC15.56■□□□□ 0.08
ATP2A3Q93084 NREP-204ENST00000419114 704 ntAPPRIS P1 TSL 2 BASIC15.56■□□□□ 0.08
ATP2A3Q93084 AC007731.4-201ENST00000420225 652 ntTSL 2 BASIC15.56■□□□□ 0.08
ATP2A3Q93084 ADAMTSL1-210ENST00000431052 824 ntTSL 2 BASIC15.56■□□□□ 0.08
ATP2A3Q93084 CHMP1AP1-201ENST00000445563 662 ntBASIC15.56■□□□□ 0.08
ATP2A3Q93084 HIST2H2BB-201ENST00000449108 381 ntBASIC15.56■□□□□ 0.08
ATP2A3Q93084 CDKN2AIP-205ENST00000510928 860 ntTSL 2 BASIC15.56■□□□□ 0.08
ATP2A3Q93084 NEU3-202ENST00000526068 431 ntTSL 2 BASIC15.56■□□□□ 0.08
ATP2A3Q93084 ACTG1P17-201ENST00000558391 1119 ntBASIC15.56■□□□□ 0.08
ATP2A3Q93084 AC110285.3-201ENST00000574472 665 ntTSL 3 BASIC15.56■□□□□ 0.08
ATP2A3Q93084 AP001002.3-201ENST00000623482 206 ntBASIC15.56■□□□□ 0.08
ATP2A3Q93084 AL360270.3-201ENST00000609118 1348 ntBASIC15.56■□□□□ 0.08
ATP2A3Q93084 CAP2-206ENST00000489374 1430 ntTSL 2 BASIC15.56■□□□□ 0.08
ATP2A3Q93084 INF2-203ENST00000392634 4672 ntAPPRIS P3 TSL 5 BASIC15.56■□□□□ 0.08
ATP2A3Q93084 RNF183-201ENST00000297894 1830 ntAPPRIS P1 TSL 2 BASIC15.56■□□□□ 0.08
ATP2A3Q93084 FAM83A-201ENST00000276699 1858 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
ATP2A3Q93084 IL9R-201ENST00000244174 1944 ntAPPRIS P3 TSL 1 (best) BASIC15.56■□□□□ 0.08
ATP2A3Q93084 STIP1-207ENST00000538945 1900 ntTSL 2 BASIC15.56■□□□□ 0.08
ATP2A3Q93084 UCK1-203ENST00000372211 2114 ntTSL 3 BASIC15.56■□□□□ 0.08
ATP2A3Q93084 RAB3IP-204ENST00000378815 2386 ntTSL 2 BASIC15.56■□□□□ 0.08
ATP2A3Q93084 PKN2-201ENST00000316005 2632 ntTSL 5 BASIC15.56■□□□□ 0.08
ATP2A3Q93084 SEC24D-202ENST00000419654 2786 ntTSL 5 BASIC15.56■□□□□ 0.08
ATP2A3Q93084 WASH2P-202ENST00000538033 2800 ntTSL 2 BASIC15.56■□□□□ 0.08
ATP2A3Q93084 RDX-218ENST00000544551 4117 ntTSL 2 BASIC15.56■□□□□ 0.08
ATP2A3Q93084 SMARCA2-208ENST00000382194 5679 ntAPPRIS P1 TSL 5 BASIC15.55■□□□□ 0.08
ATP2A3Q93084 FAM219A-204ENST00000379081 3543 ntTSL 5 BASIC15.55■□□□□ 0.08
ATP2A3Q93084 SRRT-217ENST00000618411 2893 ntAPPRIS ALT2 TSL 1 (best) BASIC15.55■□□□□ 0.08
ATP2A3Q93084 PDE1B-207ENST00000550620 2150 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
ATP2A3Q93084 NR1H3-211ENST00000441012 1637 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
ATP2A3Q93084 SUGP2-214ENST00000600377 4752 ntAPPRIS ALT2 TSL 2 BASIC15.55■□□□□ 0.08
ATP2A3Q93084 ZNF541-203ENST00000391901 4580 ntAPPRIS P2 TSL 5 BASIC15.55■□□□□ 0.08
ATP2A3Q93084 UGGT2-204ENST00000397618 1547 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
ATP2A3Q93084 C9orf24-201ENST00000297623 1151 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
ATP2A3Q93084 KRTAP21-2-201ENST00000333892 440 ntAPPRIS P1 BASIC15.55■□□□□ 0.08
ATP2A3Q93084 ZNF248-202ENST00000374648 1286 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
ATP2A3Q93084 C9orf24-205ENST00000379133 712 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
ATP2A3Q93084 BUD31-202ENST00000403633 1139 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
ATP2A3Q93084 MEMO1-204ENST00000407893 682 ntTSL 5 BASIC15.55■□□□□ 0.08
ATP2A3Q93084 AL354877.1-201ENST00000424412 413 ntBASIC15.55■□□□□ 0.08
ATP2A3Q93084 GHSR-202ENST00000427970 912 ntBASIC15.55■□□□□ 0.08
ATP2A3Q93084 AL358393.1-201ENST00000456771 532 ntTSL 2 BASIC15.55■□□□□ 0.08
ATP2A3Q93084 CCKBR-204ENST00000531712 463 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
ATP2A3Q93084 AC007406.3-201ENST00000537295 1063 ntTSL 2 BASIC15.55■□□□□ 0.08
ATP2A3Q93084 CYB561A3-219ENST00000544118 1136 ntTSL 5 BASIC15.55■□□□□ 0.08
ATP2A3Q93084 AC009093.8-202ENST00000562902 677 ntTSL 2 BASIC15.55■□□□□ 0.08
ATP2A3Q93084 LRRC37A6P-204ENST00000575554 573 ntTSL 3 BASIC15.55■□□□□ 0.08
ATP2A3Q93084 AC092634.5-202ENST00000587736 928 ntTSL 2 BASIC15.55■□□□□ 0.08
ATP2A3Q93084 SMIM24-203ENST00000587847 820 ntAPPRIS ALT2 TSL 1 (best) BASIC15.55■□□□□ 0.08
ATP2A3Q93084 RPS5-209ENST00000601521 1203 ntAPPRIS P1 TSL 5 BASIC15.55■□□□□ 0.08
ATP2A3Q93084 AL451050.2-201ENST00000606967 682 ntBASIC15.55■□□□□ 0.08
ATP2A3Q93084 AC138649.2-201ENST00000615886 705 ntBASIC15.55■□□□□ 0.08
ATP2A3Q93084 RALGDS-201ENST00000372047 3598 ntAPPRIS ALT2 TSL 1 (best) BASIC15.55■□□□□ 0.08
ATP2A3Q93084 LMX1B-202ENST00000373474 5797 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
ATP2A3Q93084 CHFR-204ENST00000443047 2990 ntTSL 2 BASIC15.55■□□□□ 0.08
ATP2A3Q93084 NFATC3-203ENST00000349223 6328 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
ATP2A3Q93084 RPH3AL-202ENST00000331302 2606 ntAPPRIS P2 TSL 2 BASIC15.55■□□□□ 0.08
ATP2A3Q93084 CSPG4P12-202ENST00000559989 7790 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
ATP2A3Q93084 KIRREL1-204ENST00000368173 7519 ntTSL 2 BASIC15.55■□□□□ 0.08
ATP2A3Q93084 ANXA6-215ENST00000523714 2451 ntTSL 2 BASIC15.55■□□□□ 0.08
ATP2A3Q93084 GGT1-201ENST00000248923 2326 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
ATP2A3Q93084 FECH-201ENST00000262093 3853 ntAPPRIS P3 TSL 1 (best) BASIC15.55■□□□□ 0.08
ATP2A3Q93084 DNAH14-204ENST00000366849 2215 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
ATP2A3Q93084 LINC00691-201ENST00000432505 2232 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
ATP2A3Q93084 RSPH3-201ENST00000252655 2175 ntAPPRIS P2 TSL 1 (best) BASIC15.55■□□□□ 0.08
ATP2A3Q93084 AKT1S1-205ENST00000391833 3640 ntAPPRIS P1 TSL 2 BASIC15.55■□□□□ 0.08
ATP2A3Q93084 GLG1-203ENST00000447066 3626 ntAPPRIS ALT2 TSL 2 BASIC15.55■□□□□ 0.08
ATP2A3Q93084 SF3B4-201ENST00000271628 2085 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
ATP2A3Q93084 MBD4-204ENST00000503197 2099 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
Retrieved 100 of 98,524 protein–RNA pairs in 53.7 ms