Protein–RNA interactions for Protein: Q92629

SGCD, Delta-sarcoglycan, humanhuman

Predictions only

Length 289 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SGCDQ92629 CADM1-204ENST00000536727 3520 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
SGCDQ92629 IDH3G-204ENST00000427365 1526 ntTSL 5 BASIC13.53□□□□□ -0.24
SGCDQ92629 RAD51D-218ENST00000590016 1528 ntTSL 2 BASIC13.53□□□□□ -0.24
SGCDQ92629 UXT-AS1-201ENST00000590504 1525 ntBASIC13.53□□□□□ -0.24
SGCDQ92629 PEG13-201ENST00000631594 5667 ntBASIC13.53□□□□□ -0.24
SGCDQ92629 CARS-214ENST00000529772 2637 ntTSL 2 BASIC13.53□□□□□ -0.24
SGCDQ92629 Z97205.2-201ENST00000564697 1639 ntBASIC13.53□□□□□ -0.24
SGCDQ92629 INO80-202ENST00000401393 5991 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
SGCDQ92629 STAT4-202ENST00000392320 2822 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
SGCDQ92629 AC215219.1-201ENST00000400706 1817 ntBASIC13.53□□□□□ -0.24
SGCDQ92629 FLNC-201ENST00000325888 9188 ntAPPRIS P3 TSL 1 (best) BASIC13.53□□□□□ -0.24
SGCDQ92629 MYO16-203ENST00000357550 6779 ntAPPRIS P3 TSL 1 (best) BASIC13.53□□□□□ -0.24
SGCDQ92629 APBA2-212ENST00000561069 3138 ntAPPRIS P1 TSL 5 BASIC13.53□□□□□ -0.24
SGCDQ92629 COL8A2-201ENST00000303143 4447 ntAPPRIS P1 TSL 2 BASIC13.53□□□□□ -0.24
SGCDQ92629 DNAJA4-203ENST00000394855 3245 ntTSL 1 (best) BASIC13.52□□□□□ -0.24
SGCDQ92629 HINT3-201ENST00000229633 3314 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.24
SGCDQ92629 CDC45-205ENST00000437685 2072 ntTSL 2 BASIC13.52□□□□□ -0.24
SGCDQ92629 WNK1-201ENST00000315939 10452 ntAPPRIS P3 TSL 1 (best) BASIC13.52□□□□□ -0.24
SGCDQ92629 CEP131-201ENST00000269392 3673 ntAPPRIS ALT2 TSL 1 (best) BASIC13.52□□□□□ -0.24
SGCDQ92629 RBFADN-204ENST00000568911 5187 ntTSL 2 BASIC13.52□□□□□ -0.24
SGCDQ92629 STRC-205ENST00000450892 5680 ntAPPRIS P2 TSL 5 BASIC13.52□□□□□ -0.24
SGCDQ92629 SLC8A3-205ENST00000394330 2622 ntTSL 1 (best) BASIC13.52□□□□□ -0.24
SGCDQ92629 ADGRG3-201ENST00000333493 2728 ntAPPRIS P3 TSL 1 (best) BASIC13.52□□□□□ -0.24
SGCDQ92629 MSL2-201ENST00000309993 4692 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.24
SGCDQ92629 RNF220-203ENST00000361799 3009 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.24
SGCDQ92629 RNF220-204ENST00000372247 3010 ntAPPRIS P1 TSL 5 BASIC13.52□□□□□ -0.24
SGCDQ92629 CLTA-201ENST00000242285 1152 ntAPPRIS P4 TSL 1 (best) BASIC13.52□□□□□ -0.25
SGCDQ92629 ELOF1-201ENST00000252445 1019 ntAPPRIS P1 TSL 2 BASIC13.52□□□□□ -0.25
SGCDQ92629 TMEM219-201ENST00000279396 999 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
SGCDQ92629 FCN2-201ENST00000291744 1057 ntAPPRIS P2 TSL 1 (best) BASIC13.52□□□□□ -0.25
SGCDQ92629 VCX-201ENST00000341408 677 ntAPPRIS ALT2 TSL 5 BASIC13.52□□□□□ -0.25
SGCDQ92629 PAXX-201ENST00000371620 812 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
SGCDQ92629 CACNB2-206ENST00000377328 1233 ntTSL 1 (best) BASIC13.52□□□□□ -0.25
SGCDQ92629 HMGN4-201ENST00000377575 1225 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
SGCDQ92629 MAPK15-202ENST00000395107 834 ntTSL 1 (best) BASIC13.52□□□□□ -0.25
SGCDQ92629 AC211486.1-202ENST00000416371 468 ntBASIC13.52□□□□□ -0.25
SGCDQ92629 AC023274.1-201ENST00000418278 595 ntBASIC13.52□□□□□ -0.25
SGCDQ92629 RPL13P2-201ENST00000440687 659 ntBASIC13.52□□□□□ -0.25
SGCDQ92629 Z82198.1-201ENST00000447396 437 ntTSL 3 BASIC13.52□□□□□ -0.25
SGCDQ92629 NSUN5P1-208ENST00000473960 500 ntTSL 3 BASIC13.52□□□□□ -0.25
SGCDQ92629 RN7SL589P-201ENST00000481268 310 ntBASIC13.52□□□□□ -0.25
SGCDQ92629 AC069335.1-201ENST00000489972 472 ntBASIC13.52□□□□□ -0.25
SGCDQ92629 AC211476.1-201ENST00000503899 468 ntBASIC13.52□□□□□ -0.25
SGCDQ92629 AL391335.1-201ENST00000504583 535 ntTSL 4 BASIC13.52□□□□□ -0.25
SGCDQ92629 AP005019.1-201ENST00000545254 664 ntTSL 3 BASIC13.52□□□□□ -0.25
SGCDQ92629 AL928654.4-206ENST00000551180 980 ntAPPRIS ALT2 TSL 5 BASIC13.52□□□□□ -0.25
SGCDQ92629 ELOF1-204ENST00000587806 1172 ntTSL 2 BASIC13.52□□□□□ -0.25
SGCDQ92629 MTDHP5-201ENST00000598980 586 ntBASIC13.52□□□□□ -0.25
SGCDQ92629 TVP23A-210ENST00000612195 1298 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
SGCDQ92629 KIF6-201ENST00000229913 1330 ntTSL 1 (best) BASIC13.52□□□□□ -0.25
SGCDQ92629 LINC02138-201ENST00000378340 1326 ntTSL 2 BASIC13.52□□□□□ -0.25
SGCDQ92629 KRT8P12-202ENST00000472924 1397 ntBASIC13.52□□□□□ -0.25
SGCDQ92629 CAMK2A-203ENST00000398376 1493 ntTSL 1 (best) BASIC13.52□□□□□ -0.25
SGCDQ92629 CREB3L4-204ENST00000368603 1557 ntAPPRIS P3 TSL 1 (best) BASIC13.52□□□□□ -0.25
SGCDQ92629 PAAF1-205ENST00000535604 1695 ntTSL 5 BASIC13.52□□□□□ -0.25
SGCDQ92629 STAM2-201ENST00000263904 5701 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
SGCDQ92629 INTS11-248ENST00000545578 2263 ntTSL 2 BASIC13.52□□□□□ -0.25
SGCDQ92629 AL162431.2-201ENST00000358073 2424 ntTSL 2 BASIC13.52□□□□□ -0.25
SGCDQ92629 RPUSD4-201ENST00000298317 2512 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
SGCDQ92629 RAB37-204ENST00000392613 2617 ntAPPRIS ALT1 TSL 2 BASIC13.52□□□□□ -0.25
SGCDQ92629 CNTN2-201ENST00000331830 7999 ntAPPRIS P2 TSL 1 (best) BASIC13.52□□□□□ -0.25
SGCDQ92629 KCTD9-201ENST00000221200 3401 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
SGCDQ92629 GOLGA2P7-207ENST00000559668 4253 ntTSL 1 (best) BASIC13.52□□□□□ -0.25
SGCDQ92629 NDFIP2-205ENST00000612570 4648 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
SGCDQ92629 DPYSL2-204ENST00000521913 4805 ntTSL 1 (best) BASIC13.52□□□□□ -0.25
SGCDQ92629 MIR193BHG-211ENST00000641433 5365 ntBASIC13.52□□□□□ -0.25
SGCDQ92629 ITGA6-202ENST00000409080 5306 ntTSL 2 BASIC13.51□□□□□ -0.25
SGCDQ92629 TET3-201ENST00000305799 5174 ntTSL 5 BASIC13.51□□□□□ -0.25
SGCDQ92629 CDK17-201ENST00000261211 4157 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
SGCDQ92629 CTNNB1-202ENST00000396183 3268 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
SGCDQ92629 C9orf3-202ENST00000297979 2820 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
SGCDQ92629 ACSL1-208ENST00000507295 2490 ntTSL 2 BASIC13.51□□□□□ -0.25
SGCDQ92629 PLEKHB2-206ENST00000409612 2210 ntAPPRIS ALT1 TSL 2 BASIC13.51□□□□□ -0.25
SGCDQ92629 EWSAT1-201ENST00000415504 2214 ntTSL 2 BASIC13.51□□□□□ -0.25
SGCDQ92629 ABI2-213ENST00000424558 2240 ntTSL 2 BASIC13.51□□□□□ -0.25
SGCDQ92629 TBC1D3E-201ENST00000621587 2076 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
SGCDQ92629 FAM224A-201ENST00000419557 2031 ntTSL 2 BASIC13.51□□□□□ -0.25
SGCDQ92629 PPP2R1B-204ENST00000426998 1888 ntAPPRIS ALT2 TSL 2 BASIC13.51□□□□□ -0.25
SGCDQ92629 CYP2E1-201ENST00000252945 1667 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
SGCDQ92629 IGF2BP1-201ENST00000290341 8274 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
SGCDQ92629 AC090826.2-201ENST00000568496 4946 ntTSL 2 BASIC13.51□□□□□ -0.25
SGCDQ92629 TMEM40-204ENST00000435218 1547 ntAPPRIS ALT2 TSL 1 (best) BASIC13.51□□□□□ -0.25
SGCDQ92629 AC011840.2-201ENST00000563063 1520 ntBASIC13.51□□□□□ -0.25
SGCDQ92629 PROKR1-201ENST00000303786 4273 ntAPPRIS P1 TSL 5 BASIC13.51□□□□□ -0.25
SGCDQ92629 COL6A1-201ENST00000361866 4238 ntAPPRIS P2 TSL 1 (best) BASIC13.51□□□□□ -0.25
SGCDQ92629 AC025594.2-201ENST00000609480 3902 ntAPPRIS P1 TSL 3 BASIC13.51□□□□□ -0.25
SGCDQ92629 CD81-202ENST00000381036 880 ntTSL 3 BASIC13.51□□□□□ -0.25
SGCDQ92629 JMJD7-203ENST00000408047 1192 ntTSL 5 BASIC13.51□□□□□ -0.25
SGCDQ92629 COA5-202ENST00000409997 557 ntTSL 4 BASIC13.51□□□□□ -0.25
SGCDQ92629 AC007388.1-210ENST00000415640 458 ntTSL 3 BASIC13.51□□□□□ -0.25
SGCDQ92629 AC015922.1-201ENST00000421102 1152 ntBASIC13.51□□□□□ -0.25
SGCDQ92629 LINC01534-201ENST00000425254 815 ntTSL 2 BASIC13.51□□□□□ -0.25
SGCDQ92629 DNAJB3-202ENST00000449667 1266 ntBASIC13.51□□□□□ -0.25
SGCDQ92629 KRT18P43-201ENST00000469825 1281 ntBASIC13.51□□□□□ -0.25
SGCDQ92629 PTPRVP-202ENST00000490575 953 ntTSL 5 BASIC13.51□□□□□ -0.25
SGCDQ92629 IGHV3-62-201ENST00000520057 340 ntBASIC13.51□□□□□ -0.25
SGCDQ92629 OBP2A-206ENST00000539850 914 ntAPPRIS P1 TSL 5 BASIC13.51□□□□□ -0.25
SGCDQ92629 SNHG9-202ENST00000564014 471 ntBASIC13.51□□□□□ -0.25
SGCDQ92629 AC018558.2-201ENST00000566562 480 ntTSL 3 BASIC13.51□□□□□ -0.25
SGCDQ92629 AC010624.2-201ENST00000600998 575 ntTSL 5 BASIC13.51□□□□□ -0.25
Retrieved 100 of 98,524 protein–RNA pairs in 36.5 ms