Protein–RNA interactions for Protein: Q8WVI0

SMIM4, Small integral membrane protein 4, humanhuman

Predictions only

Length 70 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMIM4Q8WVI0 IL12A-201ENST00000305579 1522 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
SMIM4Q8WVI0 SIRT6-203ENST00000594279 1507 ntTSL 3 BASIC12.59□□□□□ -0.39
SMIM4Q8WVI0 SLC38A1-204ENST00000546893 2332 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
SMIM4Q8WVI0 CAP1-203ENST00000372797 3105 ntAPPRIS P3 TSL 1 (best) BASIC12.59□□□□□ -0.39
SMIM4Q8WVI0 AL355102.3-201ENST00000554299 1678 ntBASIC12.59□□□□□ -0.39
SMIM4Q8WVI0 RNF14-201ENST00000347642 4213 ntAPPRIS P1 TSL 2 BASIC12.59□□□□□ -0.39
SMIM4Q8WVI0 NDUFS7-201ENST00000233627 1039 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
SMIM4Q8WVI0 MRPL58-201ENST00000301585 890 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
SMIM4Q8WVI0 RPS17-201ENST00000330244 592 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
SMIM4Q8WVI0 MPRIP-202ENST00000341712 3846 ntAPPRIS P3 TSL 5 BASIC12.59□□□□□ -0.39
SMIM4Q8WVI0 CGB3-201ENST00000357383 877 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
SMIM4Q8WVI0 CGB2-201ENST00000359342 627 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
SMIM4Q8WVI0 HIST3H2A-201ENST00000366695 895 ntAPPRIS P1 BASIC12.59□□□□□ -0.39
SMIM4Q8WVI0 ADIPOR1-202ENST00000367254 1116 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
SMIM4Q8WVI0 S100A14-204ENST00000368702 1218 ntAPPRIS P1 TSL 3 BASIC12.59□□□□□ -0.39
SMIM4Q8WVI0 MPV17-203ENST00000380044 1005 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
SMIM4Q8WVI0 CPLX2-202ENST00000393745 826 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
SMIM4Q8WVI0 MPV17-208ENST00000405076 603 ntTSL 5 BASIC12.59□□□□□ -0.39
SMIM4Q8WVI0 PIK3CD-AS2-201ENST00000415330 939 ntTSL 5 BASIC12.59□□□□□ -0.39
SMIM4Q8WVI0 SNHG17-203ENST00000417578 880 ntTSL 2 BASIC12.59□□□□□ -0.39
SMIM4Q8WVI0 AC007969.1-201ENST00000433675 447 ntBASIC12.59□□□□□ -0.39
SMIM4Q8WVI0 AL121672.1-201ENST00000439423 1181 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
SMIM4Q8WVI0 PTPRVP-202ENST00000490575 953 ntTSL 5 BASIC12.59□□□□□ -0.39
SMIM4Q8WVI0 PP7080-203ENST00000510604 859 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
SMIM4Q8WVI0 LSM1-203ENST00000520755 975 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
SMIM4Q8WVI0 LINC02055-207ENST00000524346 706 ntTSL 3 BASIC12.59□□□□□ -0.39
SMIM4Q8WVI0 DUX4L47-201ENST00000566374 394 ntBASIC12.59□□□□□ -0.39
SMIM4Q8WVI0 AC104971.3-201ENST00000589794 335 ntTSL 2 BASIC12.59□□□□□ -0.39
SMIM4Q8WVI0 MKNK2-212ENST00000591588 631 ntTSL 2 BASIC12.59□□□□□ -0.39
SMIM4Q8WVI0 AC026803.2-201ENST00000599784 819 ntTSL 3 BASIC12.59□□□□□ -0.39
SMIM4Q8WVI0 MRNIP-225ENST00000610475 810 ntTSL 5 BASIC12.59□□□□□ -0.39
SMIM4Q8WVI0 AC243829.4-204ENST00000616926 1115 ntTSL 5 BASIC12.59□□□□□ -0.39
SMIM4Q8WVI0 TRIB2-201ENST00000155926 4391 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
SMIM4Q8WVI0 PGAP2-203ENST00000396986 1837 ntTSL 2 BASIC12.59□□□□□ -0.39
SMIM4Q8WVI0 GSTM4-204ENST00000369836 1412 ntAPPRIS P2 TSL 1 (best) BASIC12.59□□□□□ -0.39
SMIM4Q8WVI0 BIN3-205ENST00000519513 1431 ntTSL 2 BASIC12.59□□□□□ -0.39
SMIM4Q8WVI0 WNK1-201ENST00000315939 10452 ntAPPRIS P3 TSL 1 (best) BASIC12.59□□□□□ -0.39
SMIM4Q8WVI0 NSD2-203ENST00000382888 2666 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
SMIM4Q8WVI0 PARVB-201ENST00000338758 5429 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
SMIM4Q8WVI0 TBC1D24-205ENST00000567020 6673 ntAPPRIS P3 TSL 1 (best) BASIC12.59□□□□□ -0.39
SMIM4Q8WVI0 INTS11-248ENST00000545578 2263 ntTSL 2 BASIC12.59□□□□□ -0.39
SMIM4Q8WVI0 C12orf73-201ENST00000378090 1738 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
SMIM4Q8WVI0 AC125807.2-201ENST00000513358 3514 ntBASIC12.59□□□□□ -0.39
SMIM4Q8WVI0 CDH3-201ENST00000264012 4929 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
SMIM4Q8WVI0 UNC5CL-201ENST00000244565 3136 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
SMIM4Q8WVI0 TUBB3P1-201ENST00000405796 1332 ntBASIC12.59□□□□□ -0.39
SMIM4Q8WVI0 CERS3-202ENST00000394113 2045 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
SMIM4Q8WVI0 ACIN1-204ENST00000397341 2738 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
SMIM4Q8WVI0 PLIN3-207ENST00000592528 2154 ntTSL 2 BASIC12.59□□□□□ -0.39
SMIM4Q8WVI0 LRRC41-208ENST00000617760 2158 ntTSL 5 BASIC12.59□□□□□ -0.39
SMIM4Q8WVI0 ACTA1-202ENST00000366684 1491 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
SMIM4Q8WVI0 SLC12A6-206ENST00000558589 3866 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
SMIM4Q8WVI0 KRT33B-201ENST00000251646 1607 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
SMIM4Q8WVI0 GGT1-203ENST00000400382 2628 ntAPPRIS P1 TSL 2 BASIC12.58□□□□□ -0.39
SMIM4Q8WVI0 ZYG11A-201ENST00000371528 4469 ntAPPRIS P1 TSL 5 BASIC12.58□□□□□ -0.39
SMIM4Q8WVI0 CRYBG2-201ENST00000308182 5245 ntAPPRIS P5 TSL 5 BASIC12.58□□□□□ -0.39
SMIM4Q8WVI0 SUOX-204ENST00000394115 2394 ntAPPRIS P1 TSL 2 BASIC12.58□□□□□ -0.4
SMIM4Q8WVI0 PTPN5-205ENST00000477854 2826 ntTSL 5 BASIC12.58□□□□□ -0.4
SMIM4Q8WVI0 SYNRG-217ENST00000612223 8229 ntAPPRIS P4 TSL 1 (best) BASIC12.58□□□□□ -0.4
SMIM4Q8WVI0 AGFG1-202ENST00000373671 1669 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
SMIM4Q8WVI0 MUTYH-234ENST00000528013 1662 ntTSL 5 BASIC12.58□□□□□ -0.4
SMIM4Q8WVI0 DIRAS3-201ENST00000370981 1973 ntAPPRIS P1 TSL 2 BASIC12.58□□□□□ -0.4
SMIM4Q8WVI0 GOLIM4-201ENST00000309027 2100 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
SMIM4Q8WVI0 GIPC3-201ENST00000322315 4335 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
SMIM4Q8WVI0 SEZ6-201ENST00000317338 4471 ntAPPRIS P4 TSL 1 (best) BASIC12.58□□□□□ -0.4
SMIM4Q8WVI0 PEG10-205ENST00000612748 2585 ntAPPRIS P5 TSL 5 BASIC12.58□□□□□ -0.4
SMIM4Q8WVI0 DSTN-201ENST00000246069 3617 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
SMIM4Q8WVI0 TYROBP-201ENST00000262629 568 ntAPPRIS P3 TSL 1 (best) BASIC12.58□□□□□ -0.4
SMIM4Q8WVI0 MDM1-201ENST00000303145 2918 ntAPPRIS P3 TSL 1 (best) BASIC12.58□□□□□ -0.4
SMIM4Q8WVI0 SPACA4-201ENST00000321762 972 ntAPPRIS P1 BASIC12.58□□□□□ -0.4
SMIM4Q8WVI0 YIF1B-201ENST00000329420 964 ntTSL 3 BASIC12.58□□□□□ -0.4
SMIM4Q8WVI0 HELT-201ENST00000338875 1008 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
SMIM4Q8WVI0 DMAC1-201ENST00000358227 2755 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
SMIM4Q8WVI0 TAF8-202ENST00000372978 794 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
SMIM4Q8WVI0 ASMT-201ENST00000381229 1087 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
SMIM4Q8WVI0 ADM2-201ENST00000395737 535 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
SMIM4Q8WVI0 NAPB-202ENST00000398425 3824 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
SMIM4Q8WVI0 MRPL3P1-201ENST00000400109 1033 ntBASIC12.58□□□□□ -0.4
SMIM4Q8WVI0 AC004832.2-201ENST00000426397 482 ntBASIC12.58□□□□□ -0.4
SMIM4Q8WVI0 AC006042.2-201ENST00000428660 568 ntTSL 4 BASIC12.58□□□□□ -0.4
SMIM4Q8WVI0 ACTG1P14-201ENST00000446382 1122 ntBASIC12.58□□□□□ -0.4
SMIM4Q8WVI0 EEF1D-223ENST00000528610 923 ntAPPRIS ALT2 TSL 1 (best) BASIC12.58□□□□□ -0.4
SMIM4Q8WVI0 AP000721.1-201ENST00000535431 559 ntAPPRIS P1 TSL 5 BASIC12.58□□□□□ -0.4
SMIM4Q8WVI0 SLC2A14-213ENST00000539924 1873 ntAPPRIS ALT2 TSL 2 BASIC12.58□□□□□ -0.4
SMIM4Q8WVI0 RHBDL2-203ENST00000540558 697 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
SMIM4Q8WVI0 SORD2P-201ENST00000558556 1069 ntBASIC12.58□□□□□ -0.4
SMIM4Q8WVI0 TYROBP-205ENST00000585901 620 ntTSL 3 BASIC12.58□□□□□ -0.4
SMIM4Q8WVI0 GPX4-206ENST00000588919 803 ntTSL 2 BASIC12.58□□□□□ -0.4
SMIM4Q8WVI0 AC104692.2-201ENST00000603054 253 ntBASIC12.58□□□□□ -0.4
SMIM4Q8WVI0 MAP2K3-214ENST00000613338 2029 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
SMIM4Q8WVI0 SMIM22-211ENST00000615889 1047 ntAPPRIS P4 TSL 5 BASIC12.58□□□□□ -0.4
SMIM4Q8WVI0 KIZ-213ENST00000620891 2014 ntAPPRIS ALT2 TSL 1 (best) BASIC12.58□□□□□ -0.4
SMIM4Q8WVI0 LINC01002-214ENST00000632102 561 ntTSL 4 BASIC12.58□□□□□ -0.4
SMIM4Q8WVI0 CTBP1-AS-201ENST00000625256 3886 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
SMIM4Q8WVI0 GTF2IRD2B-203ENST00000472837 3560 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
SMIM4Q8WVI0 ELN-222ENST00000458204 3147 ntAPPRIS ALT2 TSL 1 (best) BASIC12.58□□□□□ -0.4
SMIM4Q8WVI0 TFR2-205ENST00000462107 3131 ntAPPRIS P1 TSL 5 BASIC12.58□□□□□ -0.4
SMIM4Q8WVI0 SNX12-202ENST00000374274 2376 ntAPPRIS P3 TSL 1 (best) BASIC12.58□□□□□ -0.4
SMIM4Q8WVI0 RUBCNL-212ENST00000631139 1948 ntAPPRIS ALT2 TSL 2 BASIC12.58□□□□□ -0.4
SMIM4Q8WVI0 ATP2B3-201ENST00000263519 6420 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Retrieved 100 of 98,524 protein–RNA pairs in 42.3 ms