Protein–RNA interactions for Protein: Q8NDM7

CFAP43, Cilia- and flagella-associated protein 43, humanhuman

Predictions only

Length 1,665 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CFAP43Q8NDM7 ZNF286A-201ENST00000395893 654 ntTSL 3 BASIC22.29■■□□□ 1.16
CFAP43Q8NDM7 AL391839.2-201ENST00000412085 383 ntTSL 5 BASIC22.29■■□□□ 1.16
CFAP43Q8NDM7 AC004895.1-203ENST00000428901 540 ntTSL 4 BASIC22.29■■□□□ 1.16
CFAP43Q8NDM7 NSD2-209ENST00000436793 835 ntTSL 1 (best) BASIC22.29■■□□□ 1.16
CFAP43Q8NDM7 Z82198.1-201ENST00000447396 437 ntTSL 3 BASIC22.29■■□□□ 1.16
CFAP43Q8NDM7 GH2-203ENST00000449787 753 ntTSL 1 (best) BASIC22.29■■□□□ 1.16
CFAP43Q8NDM7 CSAG1-204ENST00000452779 627 ntAPPRIS P2 TSL 1 (best) BASIC22.29■■□□□ 1.16
CFAP43Q8NDM7 TIMP1-205ENST00000456754 1095 ntTSL 1 (best) BASIC22.29■■□□□ 1.16
CFAP43Q8NDM7 BPIFB5P-201ENST00000457066 1099 ntBASIC22.29■■□□□ 1.16
CFAP43Q8NDM7 AKR1C2-202ENST00000421196 1481 ntTSL 1 (best) BASIC22.29■■□□□ 1.16
CFAP43Q8NDM7 KREMEN1-201ENST00000327813 2719 ntAPPRIS P3 TSL 2 BASIC22.28■■□□□ 1.16
CFAP43Q8NDM7 BEAN1-201ENST00000299694 2160 ntTSL 1 (best) BASIC22.28■■□□□ 1.16
CFAP43Q8NDM7 OTX1-201ENST00000282549 2861 ntAPPRIS P1 TSL 1 (best) BASIC22.28■■□□□ 1.16
CFAP43Q8NDM7 ADI1-201ENST00000327435 2391 ntAPPRIS P1 TSL 1 (best) BASIC22.28■■□□□ 1.16
CFAP43Q8NDM7 OTX1-202ENST00000366671 2861 ntAPPRIS P1 TSL 3 BASIC22.28■■□□□ 1.16
CFAP43Q8NDM7 FUCA1P1-201ENST00000374476 1351 ntBASIC22.28■■□□□ 1.16
CFAP43Q8NDM7 ERLIN2-205ENST00000518586 2623 ntTSL 2 BASIC22.28■■□□□ 1.16
CFAP43Q8NDM7 ARMC5-204ENST00000538189 3017 ntAPPRIS ALT2 TSL 2 BASIC22.28■■□□□ 1.16
CFAP43Q8NDM7 MC5R-201ENST00000324750 1319 ntAPPRIS P1 BASIC22.28■■□□□ 1.16
CFAP43Q8NDM7 NIFK-AS1-203ENST00000419902 1316 ntTSL 2 BASIC22.28■■□□□ 1.16
CFAP43Q8NDM7 PPT2-245ENST00000361568 1759 ntAPPRIS P4 TSL 1 (best) BASIC22.28■■□□□ 1.16
CFAP43Q8NDM7 HLA-DRB5-201ENST00000374975 1260 ntAPPRIS P1 BASIC22.28■■□□□ 1.16
CFAP43Q8NDM7 RPL3P2-204ENST00000413027 1203 ntBASIC22.28■■□□□ 1.16
CFAP43Q8NDM7 AC107464.2-201ENST00000502923 569 ntTSL 2 BASIC22.28■■□□□ 1.16
CFAP43Q8NDM7 CHCHD2P2-201ENST00000503744 321 ntBASIC22.28■■□□□ 1.16
CFAP43Q8NDM7 AC009487.3-201ENST00000505579 560 ntTSL 4 BASIC22.28■■□□□ 1.16
CFAP43Q8NDM7 AC009065.6-201ENST00000568795 456 ntTSL 2 BASIC22.28■■□□□ 1.16
CFAP43Q8NDM7 AC090510.3-201ENST00000615831 821 ntBASIC22.28■■□□□ 1.16
CFAP43Q8NDM7 NKIRAS1-208ENST00000443659 2391 ntAPPRIS P2 TSL 5 BASIC22.28■■□□□ 1.16
CFAP43Q8NDM7 BCKDHA-201ENST00000269980 2103 ntAPPRIS P1 TSL 1 (best) BASIC22.28■■□□□ 1.16
CFAP43Q8NDM7 ACSL1-202ENST00000454703 3636 ntTSL 5 BASIC22.28■■□□□ 1.16
CFAP43Q8NDM7 AC015802.1-201ENST00000588104 1449 ntBASIC22.28■■□□□ 1.16
CFAP43Q8NDM7 RPL15-201ENST00000307839 2730 ntAPPRIS P1 TSL 1 (best) BASIC22.28■■□□□ 1.16
CFAP43Q8NDM7 FAM189B-202ENST00000361361 3082 ntAPPRIS P1 TSL 1 (best) BASIC22.28■■□□□ 1.16
CFAP43Q8NDM7 FOXE1-201ENST00000375123 3462 ntAPPRIS P1 BASIC22.28■■□□□ 1.16
CFAP43Q8NDM7 BLOC1S6-212ENST00000566753 1996 ntTSL 2 BASIC22.28■■□□□ 1.16
CFAP43Q8NDM7 TUBB8P4-201ENST00000511806 1324 ntBASIC22.27■■□□□ 1.16
CFAP43Q8NDM7 LINC00882-204ENST00000484698 2718 ntTSL 1 (best) BASIC22.27■■□□□ 1.16
CFAP43Q8NDM7 APP-204ENST00000357903 3543 ntAPPRIS ALT2 TSL 1 (best) BASIC22.27■■□□□ 1.16
CFAP43Q8NDM7 VCX3A-202ENST00000398729 808 ntAPPRIS ALT2 TSL 5 BASIC22.27■■□□□ 1.16
CFAP43Q8NDM7 LY6G6E-227ENST00000409239 776 ntAPPRIS ALT2 TSL 4 BASIC22.27■■□□□ 1.16
CFAP43Q8NDM7 ACTG2-204ENST00000409918 927 ntTSL 1 (best) BASIC22.27■■□□□ 1.16
CFAP43Q8NDM7 LINC02435-201ENST00000508291 584 ntTSL 3 BASIC22.27■■□□□ 1.16
CFAP43Q8NDM7 MYL6-218ENST00000550697 901 ntAPPRIS P3 TSL 1 (best) BASIC22.27■■□□□ 1.16
CFAP43Q8NDM7 AC018846.1-201ENST00000568231 183 ntBASIC22.27■■□□□ 1.16
CFAP43Q8NDM7 AC115099.1-201ENST00000570413 362 ntTSL 3 BASIC22.27■■□□□ 1.16
CFAP43Q8NDM7 AL133467.4-201ENST00000602953 725 ntBASIC22.27■■□□□ 1.16
CFAP43Q8NDM7 AC011462.4-201ENST00000616866 449 ntBASIC22.27■■□□□ 1.16
CFAP43Q8NDM7 ADO-201ENST00000373783 3627 ntAPPRIS P1 BASIC22.27■■□□□ 1.16
CFAP43Q8NDM7 AL353803.2-201ENST00000436510 1846 ntTSL 5 BASIC22.27■■□□□ 1.16
CFAP43Q8NDM7 CEP250-201ENST00000397524 1419 ntTSL 5 BASIC22.27■■□□□ 1.16
CFAP43Q8NDM7 FAM227B-212ENST00000561064 1596 ntAPPRIS ALT2 TSL 1 (best) BASIC22.27■■□□□ 1.16
CFAP43Q8NDM7 CYB5D2-203ENST00000575251 1588 ntTSL 2 BASIC22.27■■□□□ 1.16
CFAP43Q8NDM7 TPBG-202ENST00000535040 3392 ntAPPRIS P1 TSL 2 BASIC22.27■■□□□ 1.16
CFAP43Q8NDM7 AL031280.1-201ENST00000436991 2224 ntTSL 2 BASIC22.27■■□□□ 1.16
CFAP43Q8NDM7 RASA4B-202ENST00000465829 2931 ntAPPRIS ALT1 TSL 1 (best) BASIC22.27■■□□□ 1.16
CFAP43Q8NDM7 OGFOD2-202ENST00000397389 2308 ntTSL 2 BASIC22.27■■□□□ 1.15
CFAP43Q8NDM7 FAM163B-201ENST00000356873 1131 ntAPPRIS P1 TSL 1 (best) BASIC22.26■■□□□ 1.15
CFAP43Q8NDM7 CACNA1H-202ENST00000358590 8069 ntAPPRIS ALT2 TSL 5 BASIC22.26■■□□□ 1.15
CFAP43Q8NDM7 HTATIP2-202ENST00000421577 886 ntAPPRIS P1 TSL 2 BASIC22.26■■□□□ 1.15
CFAP43Q8NDM7 CCDC12-202ENST00000425441 1097 ntAPPRIS P1 TSL 5 BASIC22.26■■□□□ 1.15
CFAP43Q8NDM7 AC006529.1-201ENST00000459978 637 ntBASIC22.26■■□□□ 1.15
CFAP43Q8NDM7 AP000866.5-201ENST00000531241 445 ntTSL 5 BASIC22.26■■□□□ 1.15
CFAP43Q8NDM7 AC079949.1-201ENST00000541419 505 ntTSL 3 BASIC22.26■■□□□ 1.15
CFAP43Q8NDM7 AC079174.1-201ENST00000552486 312 ntTSL 3 BASIC22.26■■□□□ 1.15
CFAP43Q8NDM7 FOXN3-AS2-201ENST00000554071 1262 ntBASIC22.26■■□□□ 1.15
CFAP43Q8NDM7 AC008735.2-201ENST00000589456 549 ntTSL 5 BASIC22.26■■□□□ 1.15
CFAP43Q8NDM7 AC023090.1-201ENST00000592906 502 ntTSL 3 BASIC22.26■■□□□ 1.15
CFAP43Q8NDM7 PGPEP1-203ENST00000595066 762 ntTSL 2 BASIC22.26■■□□□ 1.15
CFAP43Q8NDM7 TTC39A-216ENST00000530004 1780 ntTSL 1 (best) BASIC22.26■■□□□ 1.15
CFAP43Q8NDM7 PDIA4-201ENST00000286091 2903 ntAPPRIS P1 TSL 1 (best) BASIC22.26■■□□□ 1.15
CFAP43Q8NDM7 ZNF485-201ENST00000361807 2054 ntAPPRIS P1 TSL 1 (best) BASIC22.26■■□□□ 1.15
CFAP43Q8NDM7 RNASE4-203ENST00000555835 2520 ntAPPRIS P1 TSL 1 (best) BASIC22.26■■□□□ 1.15
CFAP43Q8NDM7 WAC-AS1-202ENST00000528337 2608 ntTSL 1 (best) BASIC22.26■■□□□ 1.15
CFAP43Q8NDM7 PTK6-202ENST00000542869 2931 ntAPPRIS P1 TSL 1 (best) BASIC22.26■■□□□ 1.15
CFAP43Q8NDM7 TRIM45-202ENST00000369461 2415 ntTSL 5 BASIC22.26■■□□□ 1.15
CFAP43Q8NDM7 DDX1-201ENST00000233084 2739 ntAPPRIS P1 TSL 1 (best) BASIC22.26■■□□□ 1.15
CFAP43Q8NDM7 KCNC2-207ENST00000548513 3026 ntAPPRIS ALT2 TSL 1 (best) BASIC22.26■■□□□ 1.15
CFAP43Q8NDM7 SHROOM1-201ENST00000319854 3190 ntAPPRIS P3 TSL 1 (best) BASIC22.26■■□□□ 1.15
CFAP43Q8NDM7 SLC35F2-204ENST00000525815 3170 ntAPPRIS P2 TSL 1 (best) BASIC22.26■■□□□ 1.15
CFAP43Q8NDM7 FAM168A-202ENST00000356467 1767 ntAPPRIS P1 TSL 1 (best) BASIC22.26■■□□□ 1.15
CFAP43Q8NDM7 MMP2-201ENST00000219070 3741 ntAPPRIS P1 TSL 1 (best) BASIC22.26■■□□□ 1.15
CFAP43Q8NDM7 PPM1L-201ENST00000295839 1449 ntTSL 1 (best) BASIC22.26■■□□□ 1.15
CFAP43Q8NDM7 COX8A-201ENST00000314133 507 ntAPPRIS P1 TSL 1 (best) BASIC22.26■■□□□ 1.15
CFAP43Q8NDM7 HNRNPA1-201ENST00000330752 1294 ntTSL 5 BASIC22.26■■□□□ 1.15
CFAP43Q8NDM7 CTSL-202ENST00000342020 933 ntTSL 2 BASIC22.26■■□□□ 1.15
CFAP43Q8NDM7 USP17L6P-201ENST00000382470 1197 ntBASIC22.26■■□□□ 1.15
CFAP43Q8NDM7 AGPAT1-205ENST00000395497 2168 ntAPPRIS P1 TSL 5 BASIC22.26■■□□□ 1.15
CFAP43Q8NDM7 KLHL7-204ENST00000410047 1233 ntTSL 5 BASIC22.26■■□□□ 1.15
CFAP43Q8NDM7 EEF1DP2-201ENST00000433698 843 ntBASIC22.26■■□□□ 1.15
CFAP43Q8NDM7 AADACL2-AS1-202ENST00000483843 628 ntTSL 5 BASIC22.26■■□□□ 1.15
CFAP43Q8NDM7 IMMP1L-202ENST00000526776 469 ntTSL 3 BASIC22.26■■□□□ 1.15
CFAP43Q8NDM7 ECHDC1-220ENST00000528402 1449 ntTSL 1 (best) BASIC22.26■■□□□ 1.15
CFAP43Q8NDM7 C10orf113-201ENST00000529198 614 ntAPPRIS ALT2 TSL 1 (best) BASIC22.26■■□□□ 1.15
CFAP43Q8NDM7 AP001269.2-201ENST00000590055 379 ntTSL 3 BASIC22.26■■□□□ 1.15
CFAP43Q8NDM7 NAV1-210ENST00000593583 726 ntBASIC22.26■■□□□ 1.15
CFAP43Q8NDM7 AL121956.4-201ENST00000629925 581 ntTSL 5 BASIC22.26■■□□□ 1.15
CFAP43Q8NDM7 DNAJC10-211ENST00000640034 888 ntTSL 5 BASIC22.26■■□□□ 1.15
CFAP43Q8NDM7 NDRG1-202ENST00000414097 3755 ntAPPRIS P1 TSL 2 BASIC22.26■■□□□ 1.15
CFAP43Q8NDM7 TBC1D2-203ENST00000375064 3174 ntTSL 1 (best) BASIC22.26■■□□□ 1.15
Retrieved 100 of 98,524 protein–RNA pairs in 36.4 ms