Protein–RNA interactions for Protein: Q8N7R0

NANOGP1, Putative homeobox protein NANOG2, humanhuman

Predictions only

Length 232 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NANOGP1Q8N7R0 CRACR2A-203ENST00000440314 2697 ntAPPRIS P1 TSL 2 BASIC13.13□□□□□ -0.31
NANOGP1Q8N7R0 STK25-235ENST00000543554 2556 ntTSL 2 BASIC13.13□□□□□ -0.31
NANOGP1Q8N7R0 MRPL17-201ENST00000288937 1969 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
NANOGP1Q8N7R0 CXCL12-201ENST00000343575 1857 ntAPPRIS P3 TSL 1 (best) BASIC13.13□□□□□ -0.31
NANOGP1Q8N7R0 DGCR8-201ENST00000351989 4514 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
NANOGP1Q8N7R0 ACTA1-202ENST00000366684 1491 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
NANOGP1Q8N7R0 KMT2E-202ENST00000311117 6874 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
NANOGP1Q8N7R0 SEC13-201ENST00000337354 1363 ntAPPRIS ALT1 TSL 1 (best) BASIC13.13□□□□□ -0.31
NANOGP1Q8N7R0 TEAD4-203ENST00000397122 1396 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
NANOGP1Q8N7R0 MYH14-201ENST00000262269 3848 ntTSL 5 BASIC13.13□□□□□ -0.31
NANOGP1Q8N7R0 BRF1-202ENST00000379932 884 ntTSL 5 BASIC13.13□□□□□ -0.31
NANOGP1Q8N7R0 RETN-202ENST00000381324 249 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
NANOGP1Q8N7R0 CRYAA-203ENST00000398133 600 ntTSL 3 BASIC13.13□□□□□ -0.31
NANOGP1Q8N7R0 LINC01237-203ENST00000430555 843 ntTSL 4 BASIC13.13□□□□□ -0.31
NANOGP1Q8N7R0 AL354761.2-202ENST00000430816 546 ntAPPRIS P1 TSL 5 BASIC13.13□□□□□ -0.31
NANOGP1Q8N7R0 TPM4P1-201ENST00000436100 807 ntBASIC13.13□□□□□ -0.31
NANOGP1Q8N7R0 THRB-AS1-202ENST00000438096 702 ntTSL 3 BASIC13.13□□□□□ -0.31
NANOGP1Q8N7R0 AC097532.1-201ENST00000440802 322 ntTSL 2 BASIC13.13□□□□□ -0.31
NANOGP1Q8N7R0 MEIS3P1-201ENST00000495167 958 ntBASIC13.13□□□□□ -0.31
NANOGP1Q8N7R0 AL512356.2-201ENST00000546955 174 ntBASIC13.13□□□□□ -0.31
NANOGP1Q8N7R0 MAPKAPK5-203ENST00000547305 494 ntTSL 2 BASIC13.13□□□□□ -0.31
NANOGP1Q8N7R0 ARHGDIA-208ENST00000581876 709 ntTSL 3 BASIC13.13□□□□□ -0.31
NANOGP1Q8N7R0 TIMM13-202ENST00000591871 631 ntTSL 5 BASIC13.13□□□□□ -0.31
NANOGP1Q8N7R0 AC008761.1-201ENST00000595363 217 ntTSL 5 BASIC13.13□□□□□ -0.31
NANOGP1Q8N7R0 AC008878.4-201ENST00000602083 293 ntTSL 5 BASIC13.13□□□□□ -0.31
NANOGP1Q8N7R0 AC004835.2-201ENST00000603762 682 ntBASIC13.13□□□□□ -0.31
NANOGP1Q8N7R0 SPDYE12P-201ENST00000618416 771 ntBASIC13.13□□□□□ -0.31
NANOGP1Q8N7R0 UGGT2-212ENST00000621375 1004 ntTSL 5 BASIC13.13□□□□□ -0.31
NANOGP1Q8N7R0 FP236240.1-202ENST00000624019 601 ntTSL 3 BASIC13.13□□□□□ -0.31
NANOGP1Q8N7R0 AL603764.1-201ENST00000636452 321 ntBASIC13.13□□□□□ -0.31
NANOGP1Q8N7R0 PIAS1-202ENST00000545237 2932 ntTSL 2 BASIC13.13□□□□□ -0.31
NANOGP1Q8N7R0 ENO2-201ENST00000229277 2423 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
NANOGP1Q8N7R0 RIN3-201ENST00000216487 3859 ntAPPRIS P2 TSL 1 (best) BASIC13.13□□□□□ -0.31
NANOGP1Q8N7R0 SPATA7-217ENST00000556553 2301 ntAPPRIS ALT2 TSL 1 (best) BASIC13.13□□□□□ -0.31
NANOGP1Q8N7R0 ZNF721-205ENST00000511833 2966 ntAPPRIS P1 TSL 4 BASIC13.13□□□□□ -0.31
NANOGP1Q8N7R0 PCDHGB7-202ENST00000612073 2785 ntAPPRIS ALT2 BASIC13.13□□□□□ -0.31
NANOGP1Q8N7R0 PLPPR1-201ENST00000374874 2495 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
NANOGP1Q8N7R0 CENPL-202ENST00000356198 2357 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
NANOGP1Q8N7R0 GSTM4-204ENST00000369836 1412 ntAPPRIS P2 TSL 1 (best) BASIC13.13□□□□□ -0.31
NANOGP1Q8N7R0 FUBP1-203ENST00000370768 2378 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
NANOGP1Q8N7R0 NLRP13-201ENST00000342929 3132 ntAPPRIS P3 TSL 1 (best) BASIC13.13□□□□□ -0.31
NANOGP1Q8N7R0 ELN-209ENST00000380576 3109 ntAPPRIS ALT2 TSL 1 (best) BASIC13.13□□□□□ -0.31
NANOGP1Q8N7R0 RGR-201ENST00000358110 1349 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
NANOGP1Q8N7R0 TNRC18-203ENST00000399537 10572 ntAPPRIS ALT2 TSL 5 BASIC13.12□□□□□ -0.31
NANOGP1Q8N7R0 TNRC18-205ENST00000430969 10562 ntAPPRIS P2 TSL 5 BASIC13.12□□□□□ -0.31
NANOGP1Q8N7R0 FAM84B-201ENST00000304916 5404 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
NANOGP1Q8N7R0 SP140L-204ENST00000444636 1781 ntTSL 5 BASIC13.12□□□□□ -0.31
NANOGP1Q8N7R0 HSD17B6-205ENST00000554643 1751 ntAPPRIS P1 TSL 5 BASIC13.12□□□□□ -0.31
NANOGP1Q8N7R0 LIMD2-201ENST00000259006 3193 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
NANOGP1Q8N7R0 PDLIM2-201ENST00000265810 4592 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
NANOGP1Q8N7R0 C2-206ENST00000442278 2434 ntTSL 2 BASIC13.12□□□□□ -0.31
NANOGP1Q8N7R0 TNIP3-201ENST00000057513 2416 ntAPPRIS P3 TSL 1 (best) BASIC13.12□□□□□ -0.31
NANOGP1Q8N7R0 GAD2-203ENST00000376261 5858 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
NANOGP1Q8N7R0 GRAMD4-202ENST00000406902 4484 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
NANOGP1Q8N7R0 POPDC2-201ENST00000264231 1679 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
NANOGP1Q8N7R0 RNF145-202ENST00000424310 3613 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
NANOGP1Q8N7R0 GDPD5-201ENST00000336898 3523 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
NANOGP1Q8N7R0 KLHL32-206ENST00000544166 2864 ntTSL 2 BASIC13.12□□□□□ -0.31
NANOGP1Q8N7R0 GEM-201ENST00000297596 2208 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
NANOGP1Q8N7R0 KDELR1-201ENST00000330720 1557 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
NANOGP1Q8N7R0 MGLL-201ENST00000265052 4642 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
NANOGP1Q8N7R0 TBCE-207ENST00000543662 2117 ntAPPRIS ALT2 TSL 2 BASIC13.12□□□□□ -0.31
NANOGP1Q8N7R0 PIK3R5-216ENST00000584803 2653 ntAPPRIS ALT1 TSL 5 BASIC13.12□□□□□ -0.31
NANOGP1Q8N7R0 SDC2-201ENST00000302190 3759 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
NANOGP1Q8N7R0 G3BP2-202ENST00000359707 4883 ntAPPRIS P4 TSL 1 (best) BASIC13.12□□□□□ -0.31
NANOGP1Q8N7R0 RAB40A-202ENST00000372633 3126 ntAPPRIS P1 BASIC13.12□□□□□ -0.31
NANOGP1Q8N7R0 LINC01257-201ENST00000376678 2473 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
NANOGP1Q8N7R0 AP1B1-208ENST00000432560 4146 ntAPPRIS P1 TSL 5 BASIC13.12□□□□□ -0.31
NANOGP1Q8N7R0 DDX31-204ENST00000372159 4577 ntAPPRIS P2 TSL 1 (best) BASIC13.12□□□□□ -0.31
NANOGP1Q8N7R0 TBX6-202ENST00000395224 1803 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
NANOGP1Q8N7R0 CIB3-202ENST00000379859 467 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
NANOGP1Q8N7R0 TEX48-201ENST00000436752 708 ntAPPRIS P1 TSL 5 BASIC13.12□□□□□ -0.31
NANOGP1Q8N7R0 PPP6R2P1-201ENST00000450880 1275 ntBASIC13.12□□□□□ -0.31
NANOGP1Q8N7R0 GUSBP11-206ENST00000455485 3816 ntTSL 2 BASIC13.12□□□□□ -0.31
NANOGP1Q8N7R0 NDUFB2-202ENST00000460088 420 ntTSL 3 BASIC13.12□□□□□ -0.31
NANOGP1Q8N7R0 IQSEC2-204ENST00000485377 835 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
NANOGP1Q8N7R0 AC010226.1-202ENST00000508517 539 ntTSL 2 BASIC13.12□□□□□ -0.31
NANOGP1Q8N7R0 FAU-205ENST00000527548 538 ntAPPRIS P1 TSL 5 BASIC13.12□□□□□ -0.31
NANOGP1Q8N7R0 AC005520.2-201ENST00000556194 573 ntTSL 2 BASIC13.12□□□□□ -0.31
NANOGP1Q8N7R0 LINC01128-208ENST00000608189 824 ntTSL 5 BASIC13.12□□□□□ -0.31
NANOGP1Q8N7R0 TEX48-202ENST00000612244 662 ntTSL 3 BASIC13.12□□□□□ -0.31
NANOGP1Q8N7R0 AL136531.2-202ENST00000617804 573 ntAPPRIS P1 TSL 4 BASIC13.12□□□□□ -0.31
NANOGP1Q8N7R0 BX539320.1-201ENST00000623759 877 ntBASIC13.12□□□□□ -0.31
NANOGP1Q8N7R0 DDX31-202ENST00000372153 3285 ntAPPRIS P2 TSL 1 (best) BASIC13.12□□□□□ -0.31
NANOGP1Q8N7R0 MSRB3-202ENST00000355192 4289 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
NANOGP1Q8N7R0 TPM1-206ENST00000358278 1717 ntAPPRIS P3 TSL 1 (best) BASIC13.12□□□□□ -0.31
NANOGP1Q8N7R0 LRRC41-208ENST00000617760 2158 ntTSL 5 BASIC13.12□□□□□ -0.31
NANOGP1Q8N7R0 IGF2-203ENST00000381395 4527 ntAPPRIS P2 TSL 2 BASIC13.12□□□□□ -0.31
NANOGP1Q8N7R0 TK1-201ENST00000301634 1628 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
NANOGP1Q8N7R0 MAPK4-206ENST00000592595 4330 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
NANOGP1Q8N7R0 PSAP-202ENST00000394936 2872 ntAPPRIS P2 TSL 1 (best) BASIC13.12□□□□□ -0.31
NANOGP1Q8N7R0 RDM1-224ENST00000619262 1535 ntAPPRIS ALT2 TSL 1 (best) BASIC13.12□□□□□ -0.31
NANOGP1Q8N7R0 NDRG4-255ENST00000570248 3207 ntAPPRIS P2 TSL 1 (best) BASIC13.12□□□□□ -0.31
NANOGP1Q8N7R0 LHX6-210ENST00000559895 3587 ntTSL 2 BASIC13.12□□□□□ -0.31
NANOGP1Q8N7R0 AC139712.1-201ENST00000378256 1875 ntBASIC13.12□□□□□ -0.31
NANOGP1Q8N7R0 DTD2-202ENST00000356180 1400 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
NANOGP1Q8N7R0 BIN3-205ENST00000519513 1431 ntTSL 2 BASIC13.12□□□□□ -0.31
NANOGP1Q8N7R0 AC118758.2-201ENST00000614242 2813 ntBASIC13.12□□□□□ -0.31
NANOGP1Q8N7R0 RUFY4-201ENST00000344321 2352 ntAPPRIS P1 TSL 5 BASIC13.12□□□□□ -0.31
NANOGP1Q8N7R0 ZNF783-202ENST00000434415 4452 ntAPPRIS P1 TSL 5 BASIC13.11□□□□□ -0.31
Retrieved 100 of 98,524 protein–RNA pairs in 97.4 ms