Protein–RNA interactions for Protein: Q86TL0

ATG4D, Cysteine protease ATG4D, humanhuman

Predicted RBP Predictions only

Length 474 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4DQ86TL0 KLK11-201ENST00000319720 1198 ntAPPRIS ALT2 TSL 1 (best) BASIC13.33□□□□□ -0.28
ATG4DQ86TL0 MTHFSD-202ENST00000381214 1210 ntAPPRIS ALT2 TSL 1 (best) BASIC13.33□□□□□ -0.28
ATG4DQ86TL0 THAP4-202ENST00000402136 785 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
ATG4DQ86TL0 ROPN1-202ENST00000405845 1007 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
ATG4DQ86TL0 AC017104.1-201ENST00000415129 720 ntTSL 3 BASIC13.33□□□□□ -0.28
ATG4DQ86TL0 U82695.1-202ENST00000428676 700 ntTSL 2 BASIC13.33□□□□□ -0.28
ATG4DQ86TL0 C1QTNF6-203ENST00000434784 975 ntTSL 3 BASIC13.33□□□□□ -0.28
ATG4DQ86TL0 AC010745.3-201ENST00000439745 415 ntTSL 3 BASIC13.33□□□□□ -0.28
ATG4DQ86TL0 CHMP1AP1-201ENST00000445563 662 ntBASIC13.33□□□□□ -0.28
ATG4DQ86TL0 RASA3-IT1-201ENST00000454005 380 ntTSL 3 BASIC13.33□□□□□ -0.28
ATG4DQ86TL0 CICP12-201ENST00000455801 843 ntBASIC13.33□□□□□ -0.28
ATG4DQ86TL0 KLC4-205ENST00000458460 1251 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
ATG4DQ86TL0 AC126768.2-201ENST00000511693 718 ntTSL 3 BASIC13.33□□□□□ -0.28
ATG4DQ86TL0 AP001790.1-201ENST00000511947 570 ntTSL 4 BASIC13.33□□□□□ -0.28
ATG4DQ86TL0 PAFAH1B3-202ENST00000538771 1098 ntAPPRIS P1 TSL 2 BASIC13.33□□□□□ -0.28
ATG4DQ86TL0 NR2C2AP-207ENST00000544883 899 ntTSL 2 BASIC13.33□□□□□ -0.28
ATG4DQ86TL0 IFI27L1-210ENST00000556381 804 ntTSL 5 BASIC13.33□□□□□ -0.28
ATG4DQ86TL0 AC027237.1-201ENST00000560942 655 ntBASIC13.33□□□□□ -0.28
ATG4DQ86TL0 AC108134.4-201ENST00000570700 302 ntTSL 3 BASIC13.33□□□□□ -0.28
ATG4DQ86TL0 AC145343.1-201ENST00000579629 650 ntTSL 3 BASIC13.33□□□□□ -0.28
ATG4DQ86TL0 DMAC2-208ENST00000589970 979 ntTSL 2 BASIC13.33□□□□□ -0.28
ATG4DQ86TL0 DMAC2-215ENST00000597457 492 ntTSL 5 BASIC13.33□□□□□ -0.28
ATG4DQ86TL0 AC011510.1-201ENST00000598541 286 ntTSL 3 BASIC13.33□□□□□ -0.28
ATG4DQ86TL0 LINC01002-220ENST00000632790 449 ntTSL 5 BASIC13.33□□□□□ -0.28
ATG4DQ86TL0 SRRD-201ENST00000215917 4020 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
ATG4DQ86TL0 NF2-205ENST00000361452 5884 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
ATG4DQ86TL0 TPO-201ENST00000329066 3138 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
ATG4DQ86TL0 KRT8P4-201ENST00000509735 1454 ntBASIC13.33□□□□□ -0.28
ATG4DQ86TL0 LEF1-216ENST00000510624 1472 ntTSL 2 BASIC13.33□□□□□ -0.28
ATG4DQ86TL0 MYH11-211ENST00000576790 6272 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
ATG4DQ86TL0 ZNF84-202ENST00000392319 7020 ntAPPRIS P2 TSL 1 (best) BASIC13.33□□□□□ -0.28
ATG4DQ86TL0 NOS2P2-202ENST00000639528 1659 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
ATG4DQ86TL0 ANKHD1-EIF4EBP3-203ENST00000532219 8246 ntAPPRIS P1 TSL 2 BASIC13.33□□□□□ -0.28
ATG4DQ86TL0 IRF2BP2-201ENST00000366609 4663 ntAPPRIS P3 TSL 1 (best) BASIC13.33□□□□□ -0.28
ATG4DQ86TL0 DIAPH2-204ENST00000373054 3376 ntAPPRIS ALT2 TSL 5 BASIC13.33□□□□□ -0.28
ATG4DQ86TL0 CAMK2D-205ENST00000394524 5294 ntAPPRIS ALT1 TSL 2 BASIC13.33□□□□□ -0.28
ATG4DQ86TL0 NUCB1-201ENST00000405315 2668 ntAPPRIS P2 TSL 1 (best) BASIC13.33□□□□□ -0.28
ATG4DQ86TL0 SLC1A6-201ENST00000221742 1719 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
ATG4DQ86TL0 TEX44-201ENST00000313965 1383 ntAPPRIS P1 BASIC13.32□□□□□ -0.28
ATG4DQ86TL0 GDF9-201ENST00000296875 1796 ntTSL 5 BASIC13.32□□□□□ -0.28
ATG4DQ86TL0 OPA1-208ENST00000392438 6340 ntAPPRIS ALT1 TSL 1 (best) BASIC13.32□□□□□ -0.28
ATG4DQ86TL0 PLA2G16-201ENST00000323646 2594 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
ATG4DQ86TL0 MAN1B1-202ENST00000371589 2769 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
ATG4DQ86TL0 AC008894.2-201ENST00000597983 2987 ntTSL 2 BASIC13.32□□□□□ -0.28
ATG4DQ86TL0 AL590132.1-202ENST00000638983 4184 ntTSL 5 BASIC13.32□□□□□ -0.28
ATG4DQ86TL0 ELL-201ENST00000262809 4027 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
ATG4DQ86TL0 PDE8B-203ENST00000340978 3426 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
ATG4DQ86TL0 TBCE-202ENST00000406207 2012 ntAPPRIS P3 TSL 5 BASIC13.32□□□□□ -0.28
ATG4DQ86TL0 C1orf228-218ENST00000458657 1818 ntAPPRIS P2 TSL 5 BASIC13.32□□□□□ -0.28
ATG4DQ86TL0 RIMS1-216ENST00000521978 5079 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
ATG4DQ86TL0 PEF1-201ENST00000373703 1629 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
ATG4DQ86TL0 STYXL1-201ENST00000248600 1415 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
ATG4DQ86TL0 CAP2-206ENST00000489374 1430 ntTSL 2 BASIC13.32□□□□□ -0.28
ATG4DQ86TL0 COL17A1-201ENST00000353479 5734 ntAPPRIS P2 TSL 1 (best) BASIC13.32□□□□□ -0.28
ATG4DQ86TL0 FAM46C-201ENST00000369448 5751 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
ATG4DQ86TL0 CTNS-202ENST00000381870 2470 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
ATG4DQ86TL0 MPP6-201ENST00000222644 8452 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
ATG4DQ86TL0 CEP131-203ENST00000450824 3543 ntAPPRIS ALT2 TSL 1 (best) BASIC13.32□□□□□ -0.28
ATG4DQ86TL0 JPH1-201ENST00000342232 4378 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
ATG4DQ86TL0 FANCA-213ENST00000563673 1694 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
ATG4DQ86TL0 SEPT12-201ENST00000268231 1469 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
ATG4DQ86TL0 ACTA1-202ENST00000366684 1491 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
ATG4DQ86TL0 MKRN3-201ENST00000314520 2337 ntAPPRIS P1 BASIC13.32□□□□□ -0.28
ATG4DQ86TL0 RTEL1-201ENST00000318100 4676 ntTSL 2 BASIC13.32□□□□□ -0.28
ATG4DQ86TL0 NOL4L-202ENST00000326071 701 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
ATG4DQ86TL0 EDN2-201ENST00000372587 1241 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
ATG4DQ86TL0 KLK8-204ENST00000391806 1051 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
ATG4DQ86TL0 MDP1-202ENST00000396833 582 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
ATG4DQ86TL0 ATP6V1E1-202ENST00000399796 1208 ntTSL 2 BASIC13.32□□□□□ -0.28
ATG4DQ86TL0 MPV17-206ENST00000402722 827 ntTSL 3 BASIC13.32□□□□□ -0.28
ATG4DQ86TL0 AC010141.1-201ENST00000411585 623 ntBASIC13.32□□□□□ -0.28
ATG4DQ86TL0 CNN2P10-201ENST00000443067 918 ntBASIC13.32□□□□□ -0.28
ATG4DQ86TL0 AL355994.2-201ENST00000447882 704 ntBASIC13.32□□□□□ -0.28
ATG4DQ86TL0 AL035414.1-201ENST00000451327 857 ntBASIC13.32□□□□□ -0.28
ATG4DQ86TL0 GLYCTK-203ENST00000461183 889 ntTSL 3 BASIC13.32□□□□□ -0.28
ATG4DQ86TL0 FAM162A-202ENST00000469967 1015 ntTSL 2 BASIC13.32□□□□□ -0.28
ATG4DQ86TL0 AC104596.1-201ENST00000507826 579 ntTSL 4 BASIC13.32□□□□□ -0.28
ATG4DQ86TL0 AC008808.1-201ENST00000508923 432 ntTSL 3 BASIC13.32□□□□□ -0.28
ATG4DQ86TL0 HOXC-AS3-201ENST00000509870 544 ntTSL 4 BASIC13.32□□□□□ -0.28
ATG4DQ86TL0 NME2-206ENST00000513177 692 ntAPPRIS P1 TSL 2 BASIC13.32□□□□□ -0.28
ATG4DQ86TL0 C11orf98-201ENST00000524958 654 ntAPPRIS P1 TSL 2 BASIC13.32□□□□□ -0.28
ATG4DQ86TL0 C1RL-212ENST00000545337 813 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
ATG4DQ86TL0 AC090502.1-201ENST00000549905 748 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
ATG4DQ86TL0 AC090502.1-204ENST00000551210 469 ntTSL 2 BASIC13.32□□□□□ -0.28
ATG4DQ86TL0 AL163974.1-201ENST00000554540 466 ntTSL 5 BASIC13.32□□□□□ -0.28
ATG4DQ86TL0 AL133153.2-201ENST00000557524 303 ntTSL 3 BASIC13.32□□□□□ -0.28
ATG4DQ86TL0 CMTM3-212ENST00000566121 572 ntTSL 3 BASIC13.32□□□□□ -0.28
ATG4DQ86TL0 PPY2P-201ENST00000582808 702 ntBASIC13.32□□□□□ -0.28
ATG4DQ86TL0 PPY2P-202ENST00000583761 657 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
ATG4DQ86TL0 TECR-207ENST00000596073 1170 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
ATG4DQ86TL0 TECR-220ENST00000600083 1204 ntTSL 2 BASIC13.32□□□□□ -0.28
ATG4DQ86TL0 NPIPB11-202ENST00000614927 1216 ntTSL 5 BASIC13.32□□□□□ -0.28
ATG4DQ86TL0 AC027601.3-201ENST00000622907 509 ntBASIC13.32□□□□□ -0.28
ATG4DQ86TL0 CYP4B1-215ENST00000640628 969 ntTSL 5 BASIC13.32□□□□□ -0.28
ATG4DQ86TL0 ZBTB7C-213ENST00000588982 4949 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
ATG4DQ86TL0 GCLM-204ENST00000615724 3008 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
ATG4DQ86TL0 TCAM1P-207ENST00000485295 1537 ntBASIC13.32□□□□□ -0.28
ATG4DQ86TL0 ZNF750-202ENST00000572562 1513 ntTSL 2 BASIC13.32□□□□□ -0.28
ATG4DQ86TL0 ZFP64-201ENST00000216923 3264 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
ATG4DQ86TL0 FAM219A-204ENST00000379081 3543 ntTSL 5 BASIC13.32□□□□□ -0.28
Retrieved 100 of 98,524 protein–RNA pairs in 66.7 ms