Protein–RNA interactions for Protein: Q71U36

TUBA1A, Tubulin alpha-1A chain, humanhuman

Predictions only

Length 451 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TUBA1AQ71U36 POM121-202ENST00000395270 7011 ntAPPRIS ALT2 TSL 1 (best) BASIC13.69□□□□□ -0.22
TUBA1AQ71U36 TM9SF1-202ENST00000396854 2055 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
TUBA1AQ71U36 LINC01792-201ENST00000452787 2050 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
TUBA1AQ71U36 ZSCAN2-203ENST00000334141 993 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
TUBA1AQ71U36 ACTA1-201ENST00000366683 1122 ntTSL 5 BASIC13.69□□□□□ -0.22
TUBA1AQ71U36 CALY-202ENST00000368555 783 ntTSL 2 BASIC13.69□□□□□ -0.22
TUBA1AQ71U36 TCEAL3-202ENST00000372627 1113 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
TUBA1AQ71U36 PKIG-203ENST00000372887 769 ntTSL 3 BASIC13.69□□□□□ -0.22
TUBA1AQ71U36 MAP9-202ENST00000379248 1165 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
TUBA1AQ71U36 EEF1B2-202ENST00000392221 880 ntAPPRIS P1 TSL 2 BASIC13.69□□□□□ -0.22
TUBA1AQ71U36 AC098850.1-201ENST00000419919 790 ntBASIC13.69□□□□□ -0.22
TUBA1AQ71U36 AL161638.1-201ENST00000420354 481 ntTSL 3 BASIC13.69□□□□□ -0.22
TUBA1AQ71U36 DFFBP1-201ENST00000433250 979 ntBASIC13.69□□□□□ -0.22
TUBA1AQ71U36 AC093459.1-202ENST00000438963 768 ntTSL 3 BASIC13.69□□□□□ -0.22
TUBA1AQ71U36 DUSP13-205ENST00000464872 684 ntTSL 3 BASIC13.69□□□□□ -0.22
TUBA1AQ71U36 SLC25A30-AS1-201ENST00000506633 701 ntTSL 3 BASIC13.69□□□□□ -0.22
TUBA1AQ71U36 YEATS4-202ENST00000548020 1100 ntTSL 2 BASIC13.69□□□□□ -0.22
TUBA1AQ71U36 SHBG-212ENST00000575314 1146 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
TUBA1AQ71U36 LITAF-218ENST00000576036 603 ntAPPRIS P1 TSL 4 BASIC13.69□□□□□ -0.22
TUBA1AQ71U36 SNHG8-201ENST00000602414 672 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
TUBA1AQ71U36 SNHG8-205ENST00000602819 470 ntTSL 2 BASIC13.69□□□□□ -0.22
TUBA1AQ71U36 DUSP13-212ENST00000605915 1015 ntTSL 5 BASIC13.69□□□□□ -0.22
TUBA1AQ71U36 MIR8072-201ENST00000614241 80 ntBASIC13.69□□□□□ -0.22
TUBA1AQ71U36 FRZB-201ENST00000295113 3162 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
TUBA1AQ71U36 AMBP-201ENST00000265132 1434 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
TUBA1AQ71U36 FDPS-202ENST00000368356 1431 ntAPPRIS P3 TSL 2 BASIC13.69□□□□□ -0.22
TUBA1AQ71U36 ANKMY1-210ENST00000406958 2396 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
TUBA1AQ71U36 HFE2-205ENST00000497365 1419 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
TUBA1AQ71U36 FAM103A1-201ENST00000304191 1568 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
TUBA1AQ71U36 TNFRSF11A-206ENST00000617039 3756 ntAPPRIS ALT2 TSL 1 (best) BASIC13.69□□□□□ -0.22
TUBA1AQ71U36 ABCA7-202ENST00000433129 6704 ntAPPRIS P2 TSL 1 (best) BASIC13.69□□□□□ -0.22
TUBA1AQ71U36 ZNF641-201ENST00000301042 4544 ntTSL 5 BASIC13.69□□□□□ -0.22
TUBA1AQ71U36 FIBCD1-202ENST00000372338 3253 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
TUBA1AQ71U36 ESS2-201ENST00000252137 5392 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
TUBA1AQ71U36 NFYA-202ENST00000353205 1660 ntTSL 5 BASIC13.69□□□□□ -0.22
TUBA1AQ71U36 TP73-209ENST00000603362 1668 ntTSL 5 BASIC13.69□□□□□ -0.22
TUBA1AQ71U36 SMARCA2-214ENST00000450198 5602 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
TUBA1AQ71U36 C19orf66-202ENST00000397881 2140 ntAPPRIS ALT2 TSL 2 BASIC13.69□□□□□ -0.22
TUBA1AQ71U36 ZMYND15-201ENST00000269289 2448 ntTSL 5 BASIC13.69□□□□□ -0.22
TUBA1AQ71U36 AAR2-201ENST00000320849 2430 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
TUBA1AQ71U36 PNMA1-201ENST00000316836 2590 ntAPPRIS P1 BASIC13.69□□□□□ -0.22
TUBA1AQ71U36 TRIM65-201ENST00000269383 3439 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
TUBA1AQ71U36 CR382287.2-201ENST00000623370 1942 ntTSL 2 BASIC13.68□□□□□ -0.22
TUBA1AQ71U36 VAMP4-201ENST00000236192 5159 ntAPPRIS P3 TSL 1 (best) BASIC13.68□□□□□ -0.22
TUBA1AQ71U36 ZBTB1-201ENST00000358738 4119 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
TUBA1AQ71U36 IL20RA-207ENST00000541547 3382 ntTSL 2 BASIC13.68□□□□□ -0.22
TUBA1AQ71U36 PCMTD2-204ENST00000369758 3212 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
TUBA1AQ71U36 UBE3A-204ENST00000438097 8939 ntAPPRIS P3 TSL 5 BASIC13.68□□□□□ -0.22
TUBA1AQ71U36 MAGED4B-207ENST00000485287 2618 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
TUBA1AQ71U36 TRAFD1-201ENST00000257604 3178 ntAPPRIS P2 TSL 2 BASIC13.68□□□□□ -0.22
TUBA1AQ71U36 P2RX5-207ENST00000551178 1863 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
TUBA1AQ71U36 MAGEA4-201ENST00000276344 1724 ntAPPRIS P1 TSL 2 BASIC13.68□□□□□ -0.22
TUBA1AQ71U36 RBPMS2-202ENST00000560606 1746 ntTSL 2 BASIC13.68□□□□□ -0.22
TUBA1AQ71U36 RPS6KA1-213ENST00000526792 2596 ntTSL 5 BASIC13.68□□□□□ -0.22
TUBA1AQ71U36 SETD6-203ENST00000394266 3423 ntTSL 5 BASIC13.68□□□□□ -0.22
TUBA1AQ71U36 TRIM45-202ENST00000369461 2415 ntTSL 5 BASIC13.68□□□□□ -0.22
TUBA1AQ71U36 NDUFA2-201ENST00000252102 804 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
TUBA1AQ71U36 VCX-201ENST00000341408 677 ntAPPRIS ALT2 TSL 5 BASIC13.68□□□□□ -0.22
TUBA1AQ71U36 ING1-204ENST00000375775 1074 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
TUBA1AQ71U36 PIR-201ENST00000380420 1282 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
TUBA1AQ71U36 RTN4RL2-202ENST00000395120 582 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
TUBA1AQ71U36 NAALADL1-207ENST00000526799 959 ntTSL 5 BASIC13.68□□□□□ -0.22
TUBA1AQ71U36 AP001107.3-201ENST00000534065 544 ntTSL 4 BASIC13.68□□□□□ -0.22
TUBA1AQ71U36 AC123567.1-201ENST00000548294 1261 ntBASIC13.68□□□□□ -0.22
TUBA1AQ71U36 RARRES2P5-201ENST00000564013 466 ntBASIC13.68□□□□□ -0.22
TUBA1AQ71U36 COMMD4-217ENST00000567195 677 ntTSL 2 BASIC13.68□□□□□ -0.22
TUBA1AQ71U36 AC108134.3-202ENST00000571404 1207 ntTSL 5 BASIC13.68□□□□□ -0.22
TUBA1AQ71U36 TMEM101-204ENST00000587529 965 ntTSL 2 BASIC13.68□□□□□ -0.22
TUBA1AQ71U36 MARCH2-206ENST00000601283 747 ntTSL 3 BASIC13.68□□□□□ -0.22
TUBA1AQ71U36 AL662799.1-202ENST00000614205 422 ntBASIC13.68□□□□□ -0.22
TUBA1AQ71U36 LOXL4-201ENST00000260702 3653 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
TUBA1AQ71U36 EP400NL-206ENST00000446190 3697 ntTSL 2 BASIC13.68□□□□□ -0.22
TUBA1AQ71U36 ZKSCAN4-201ENST00000377294 2375 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
TUBA1AQ71U36 LINC00116-201ENST00000414416 2051 ntAPPRIS P5 TSL 1 (best) BASIC13.68□□□□□ -0.22
TUBA1AQ71U36 ARHGEF1-201ENST00000337665 3171 ntAPPRIS P4 TSL 1 (best) BASIC13.68□□□□□ -0.22
TUBA1AQ71U36 SMOC2-201ENST00000354536 3150 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
TUBA1AQ71U36 MKL1-202ENST00000396617 4505 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
TUBA1AQ71U36 MFAP3-201ENST00000322602 2891 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
TUBA1AQ71U36 NDFIP2-205ENST00000612570 4648 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
TUBA1AQ71U36 BOLL-203ENST00000392296 2838 ntAPPRIS ALT2 TSL 1 (best) BASIC13.68□□□□□ -0.22
TUBA1AQ71U36 CASQ1-201ENST00000368078 1897 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
TUBA1AQ71U36 INE2-201ENST00000630399 1874 ntBASIC13.67□□□□□ -0.22
TUBA1AQ71U36 HEY1-202ENST00000354724 2293 ntAPPRIS P3 TSL 1 (best) BASIC13.67□□□□□ -0.22
TUBA1AQ71U36 MYLK-208ENST00000475616 5745 ntAPPRIS ALT2 TSL 1 (best) BASIC13.67□□□□□ -0.22
TUBA1AQ71U36 ANKEF1-201ENST00000378380 5303 ntAPPRIS P1 TSL 2 BASIC13.67□□□□□ -0.22
TUBA1AQ71U36 TNS2-202ENST00000314276 4944 ntAPPRIS P4 TSL 1 (best) BASIC13.67□□□□□ -0.22
TUBA1AQ71U36 EHMT2-204ENST00000395728 4129 ntAPPRIS ALT2 TSL 1 (best) BASIC13.67□□□□□ -0.22
TUBA1AQ71U36 UCK1-203ENST00000372211 2114 ntTSL 3 BASIC13.67□□□□□ -0.22
TUBA1AQ71U36 DDX19B-203ENST00000393657 1717 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
TUBA1AQ71U36 SEPT8-212ENST00000458488 1726 ntTSL 5 BASIC13.67□□□□□ -0.22
TUBA1AQ71U36 KIAA0319-204ENST00000537886 6622 ntAPPRIS ALT2 TSL 1 (best) BASIC13.67□□□□□ -0.22
TUBA1AQ71U36 IGHA1-202ENST00000641837 1310 ntAPPRIS P5 BASIC13.67□□□□□ -0.22
TUBA1AQ71U36 CYB561D1-201ENST00000310611 5009 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
TUBA1AQ71U36 C11orf71-202ENST00000623205 1980 ntAPPRIS ALT2 BASIC13.67□□□□□ -0.22
TUBA1AQ71U36 TNK1-207ENST00000576812 3023 ntAPPRIS ALT1 TSL 1 (best) BASIC13.67□□□□□ -0.22
TUBA1AQ71U36 ATP6V1C2-201ENST00000272238 1565 ntTSL 5 BASIC13.67□□□□□ -0.22
TUBA1AQ71U36 AC007787.1-201ENST00000588095 1583 ntBASIC13.67□□□□□ -0.22
TUBA1AQ71U36 DAGLB-201ENST00000297056 2897 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
TUBA1AQ71U36 NUTM2G-201ENST00000354649 2851 ntAPPRIS P3 TSL 5 BASIC13.67□□□□□ -0.22
TUBA1AQ71U36 GMIP-201ENST00000203556 3538 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Retrieved 100 of 98,524 protein–RNA pairs in 83.2 ms