Protein–RNA interactions for Protein: Q5ST30

VARS2, Valine--tRNA ligase, mitochondrial, humanhuman

Known RBP Predictions only

Length 1,063 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VARS2Q5ST30 TJAP1-207ENST00000436109 2572 ntAPPRIS P1 TSL 5 BASIC15.59■□□□□ 0.09
VARS2Q5ST30 KLHL42-201ENST00000381271 6703 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
VARS2Q5ST30 PICALM-204ENST00000526033 3613 ntAPPRIS ALT1 TSL 1 (best) BASIC15.59■□□□□ 0.09
VARS2Q5ST30 ARHGAP26-202ENST00000378004 9200 ntAPPRIS ALT1 TSL 1 (best) BASIC15.59■□□□□ 0.09
VARS2Q5ST30 SIGLEC10-201ENST00000339313 2256 ntAPPRIS P3 TSL 1 (best) BASIC15.59■□□□□ 0.09
VARS2Q5ST30 CCP110-201ENST00000381396 5446 ntAPPRIS ALT1 TSL 1 (best) BASIC15.59■□□□□ 0.09
VARS2Q5ST30 AP000552.1-203ENST00000416615 1930 ntTSL 5 BASIC15.59■□□□□ 0.09
VARS2Q5ST30 ZNF586-202ENST00000396150 1977 ntTSL 1 (best) BASIC15.59■□□□□ 0.09
VARS2Q5ST30 DDX1-201ENST00000233084 2739 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
VARS2Q5ST30 RPP40-201ENST00000319533 1088 ntTSL 1 (best) BASIC15.59■□□□□ 0.09
VARS2Q5ST30 FCRLB-201ENST00000336830 1193 ntTSL 1 (best) BASIC15.59■□□□□ 0.09
VARS2Q5ST30 FCRLB-202ENST00000367944 1172 ntTSL 1 (best) BASIC15.59■□□□□ 0.09
VARS2Q5ST30 FCRLB-203ENST00000367945 1131 ntTSL 1 (best) BASIC15.59■□□□□ 0.09
VARS2Q5ST30 ARMC12-203ENST00000373869 1111 ntTSL 2 BASIC15.59■□□□□ 0.09
VARS2Q5ST30 KRTAP2-4-201ENST00000394015 764 ntAPPRIS P1 BASIC15.59■□□□□ 0.09
VARS2Q5ST30 TEX33-202ENST00000402860 986 ntAPPRIS P3 TSL 1 (best) BASIC15.59■□□□□ 0.09
VARS2Q5ST30 ZRANB2-AS1-201ENST00000426999 607 ntTSL 3 BASIC15.59■□□□□ 0.09
VARS2Q5ST30 LAMA4-209ENST00000453937 645 ntTSL 1 (best) BASIC15.59■□□□□ 0.09
VARS2Q5ST30 AC009495.2-201ENST00000457108 506 ntTSL 2 BASIC15.59■□□□□ 0.09
VARS2Q5ST30 AC135178.1-201ENST00000458568 537 ntTSL 3 BASIC15.59■□□□□ 0.09
VARS2Q5ST30 ATP6V1G2-210ENST00000483251 662 ntTSL 3 BASIC15.59■□□□□ 0.09
VARS2Q5ST30 CXCL11-202ENST00000503860 767 ntAPPRIS P1 TSL 3 BASIC15.59■□□□□ 0.09
VARS2Q5ST30 PGRMC2-206ENST00000512483 1144 ntTSL 5 BASIC15.59■□□□□ 0.09
VARS2Q5ST30 AC116345.2-201ENST00000512837 523 ntBASIC15.59■□□□□ 0.09
VARS2Q5ST30 AC104561.3-201ENST00000518590 715 ntTSL 5 BASIC15.59■□□□□ 0.09
VARS2Q5ST30 EEF1D-218ENST00000526838 926 ntAPPRIS ALT2 TSL 2 BASIC15.59■□□□□ 0.09
VARS2Q5ST30 AC016044.1-201ENST00000560818 572 ntTSL 4 BASIC15.59■□□□□ 0.09
VARS2Q5ST30 JMJD8-203ENST00000562824 1015 ntAPPRIS ALT2 TSL 1 (best) BASIC15.59■□□□□ 0.09
VARS2Q5ST30 AC011825.3-201ENST00000583184 565 ntTSL 5 BASIC15.59■□□□□ 0.09
VARS2Q5ST30 KHK-201ENST00000260598 2397 ntAPPRIS P5 TSL 2 BASIC15.59■□□□□ 0.09
VARS2Q5ST30 ZCCHC4-201ENST00000302874 2785 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
VARS2Q5ST30 ATP6V0E2-207ENST00000479613 1666 ntTSL 2 BASIC15.59■□□□□ 0.09
VARS2Q5ST30 PTPRF-201ENST00000359947 7727 ntTSL 1 (best) BASIC15.59■□□□□ 0.09
VARS2Q5ST30 AC018442.1-201ENST00000421439 2061 ntBASIC15.59■□□□□ 0.09
VARS2Q5ST30 UBXN11-207ENST00000374223 1312 ntTSL 1 (best) BASIC15.59■□□□□ 0.09
VARS2Q5ST30 MAGEA1-201ENST00000356661 1710 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
VARS2Q5ST30 MLKL-202ENST00000308807 2523 ntAPPRIS P1 TSL 2 BASIC15.59■□□□□ 0.09
VARS2Q5ST30 MBD1-222ENST00000590208 2913 ntAPPRIS ALT2 TSL 1 (best) BASIC15.59■□□□□ 0.09
VARS2Q5ST30 GNE-202ENST00000396594 5298 ntTSL 1 (best) BASIC15.59■□□□□ 0.09
VARS2Q5ST30 AL022326.1-201ENST00000434516 1778 ntTSL 2 BASIC15.59■□□□□ 0.09
VARS2Q5ST30 RCOR2-201ENST00000301459 2604 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
VARS2Q5ST30 CREB3L3-201ENST00000078445 2618 ntAPPRIS P3 TSL 1 (best) BASIC15.59■□□□□ 0.09
VARS2Q5ST30 LMBRD1-202ENST00000370577 2209 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
VARS2Q5ST30 KIAA1614-AS1-201ENST00000415647 1440 ntTSL 2 BASIC15.59■□□□□ 0.09
VARS2Q5ST30 RPL13-204ENST00000452368 1455 ntTSL 2 BASIC15.59■□□□□ 0.09
VARS2Q5ST30 AKAP1-201ENST00000314126 2380 ntTSL 1 (best) BASIC15.58■□□□□ 0.09
VARS2Q5ST30 CHEK2-204ENST00000382580 1971 ntAPPRIS ALT2 TSL 1 (best) BASIC15.58■□□□□ 0.09
VARS2Q5ST30 TIMP3-201ENST00000266085 4603 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.09
VARS2Q5ST30 AC006504.5-208ENST00000588784 2401 ntBASIC15.58■□□□□ 0.09
VARS2Q5ST30 PDIA4-201ENST00000286091 2903 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.09
VARS2Q5ST30 AJ011931.1-201ENST00000618749 2492 ntBASIC15.58■□□□□ 0.09
VARS2Q5ST30 ZNF302-207ENST00000505365 2955 ntTSL 2 BASIC15.58■□□□□ 0.09
VARS2Q5ST30 CACNA2D2-203ENST00000423994 5329 ntAPPRIS ALT2 TSL 5 BASIC15.58■□□□□ 0.09
VARS2Q5ST30 NAALADL1-203ENST00000356632 2118 ntTSL 5 BASIC15.58■□□□□ 0.08
VARS2Q5ST30 PAQR6-204ENST00000356983 2143 ntAPPRIS ALT1 TSL 2 BASIC15.58■□□□□ 0.08
VARS2Q5ST30 NDRG2-226ENST00000554104 2146 ntTSL 1 (best) BASIC15.58■□□□□ 0.08
VARS2Q5ST30 RUFY1-204ENST00000437570 2642 ntAPPRIS ALT2 TSL 2 BASIC15.58■□□□□ 0.08
VARS2Q5ST30 MAGED4B-207ENST00000485287 2618 ntTSL 1 (best) BASIC15.58■□□□□ 0.08
VARS2Q5ST30 MED26-201ENST00000263390 3174 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
VARS2Q5ST30 ADARB1-202ENST00000360697 6604 ntTSL 1 (best) BASIC15.58■□□□□ 0.08
VARS2Q5ST30 AC018629.1-201ENST00000623381 1736 ntBASIC15.58■□□□□ 0.08
VARS2Q5ST30 ABHD14B-201ENST00000315877 2236 ntTSL 5 BASIC15.58■□□□□ 0.08
VARS2Q5ST30 MTA1-203ENST00000406191 2770 ntAPPRIS P5 TSL 2 BASIC15.58■□□□□ 0.08
VARS2Q5ST30 LINC01285-201ENST00000412422 2289 ntTSL 2 BASIC15.58■□□□□ 0.08
VARS2Q5ST30 AC007728.2-201ENST00000563315 2296 ntTSL 5 BASIC15.58■□□□□ 0.08
VARS2Q5ST30 CKMT1B-201ENST00000300283 1779 ntAPPRIS P1 TSL 5 BASIC15.58■□□□□ 0.08
VARS2Q5ST30 CKMT1A-204ENST00000434505 1779 ntAPPRIS P1 TSL 5 BASIC15.58■□□□□ 0.08
VARS2Q5ST30 CIT-219ENST00000612548 1799 ntTSL 1 (best) BASIC15.58■□□□□ 0.08
VARS2Q5ST30 STX1A-202ENST00000395154 1022 ntTSL 3 BASIC15.58■□□□□ 0.08
VARS2Q5ST30 AP1B1P1-201ENST00000432373 827 ntTSL 3 BASIC15.58■□□□□ 0.08
VARS2Q5ST30 GDAP1-202ENST00000434412 1228 ntTSL 1 (best) BASIC15.58■□□□□ 0.08
VARS2Q5ST30 AL591684.1-201ENST00000434533 234 ntTSL 5 BASIC15.58■□□□□ 0.08
VARS2Q5ST30 AL136982.2-201ENST00000451760 234 ntTSL 5 BASIC15.58■□□□□ 0.08
VARS2Q5ST30 RASA3-IT1-201ENST00000454005 380 ntTSL 3 BASIC15.58■□□□□ 0.08
VARS2Q5ST30 AC008443.1-201ENST00000511331 1000 ntTSL 3 BASIC15.58■□□□□ 0.08
VARS2Q5ST30 MCPH1-AS1-203ENST00000525186 869 ntTSL 3 BASIC15.58■□□□□ 0.08
VARS2Q5ST30 AP002387.1-201ENST00000529369 680 ntTSL 2 BASIC15.58■□□□□ 0.08
VARS2Q5ST30 RTN3P1-201ENST00000536295 711 ntBASIC15.58■□□□□ 0.08
VARS2Q5ST30 MIR4750-201ENST00000584564 56 ntBASIC15.58■□□□□ 0.08
VARS2Q5ST30 AC008133.1-201ENST00000584688 557 ntTSL 4 BASIC15.58■□□□□ 0.08
VARS2Q5ST30 MAP3K14-AS1-210ENST00000592422 831 ntTSL 3 BASIC15.58■□□□□ 0.08
VARS2Q5ST30 AC005901.1-201ENST00000592766 552 ntTSL 4 BASIC15.58■□□□□ 0.08
VARS2Q5ST30 IRF3-215ENST00000596822 823 ntTSL 3 BASIC15.58■□□□□ 0.08
VARS2Q5ST30 TLDC2-203ENST00000602922 1179 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
VARS2Q5ST30 C1QTNF9-201ENST00000332018 1830 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
VARS2Q5ST30 SUOX-204ENST00000394115 2394 ntAPPRIS P1 TSL 2 BASIC15.58■□□□□ 0.08
VARS2Q5ST30 CXorf40A-209ENST00000441248 2411 ntAPPRIS P3 TSL 1 (best) BASIC15.58■□□□□ 0.08
VARS2Q5ST30 RIF1-204ENST00000430328 7992 ntAPPRIS ALT2 TSL 1 (best) BASIC15.58■□□□□ 0.08
VARS2Q5ST30 AP002360.1-202ENST00000530460 2462 ntAPPRIS ALT2 BASIC15.58■□□□□ 0.08
VARS2Q5ST30 CPA5-201ENST00000393213 1444 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
VARS2Q5ST30 FETUB-207ENST00000450521 1410 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
VARS2Q5ST30 EVPL-201ENST00000301607 6614 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
VARS2Q5ST30 TMEM50A-201ENST00000374358 2683 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
VARS2Q5ST30 NBPF9-207ENST00000615421 5835 ntAPPRIS P2 TSL 5 BASIC15.58■□□□□ 0.08
VARS2Q5ST30 DYRK1A-203ENST00000398956 1590 ntTSL 1 (best) BASIC15.58■□□□□ 0.08
VARS2Q5ST30 AC126177.1-201ENST00000547829 2218 ntBASIC15.58■□□□□ 0.08
VARS2Q5ST30 NFATC4-203ENST00000422617 5491 ntAPPRIS ALT2 TSL 1 (best) BASIC15.57■□□□□ 0.08
VARS2Q5ST30 PCSK2-205ENST00000536609 2275 ntTSL 2 BASIC15.57■□□□□ 0.08
VARS2Q5ST30 RNF32-202ENST00000317955 1682 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
VARS2Q5ST30 MRI1-202ENST00000319545 3027 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
Retrieved 100 of 98,524 protein–RNA pairs in 36 ms