Protein–RNA interactions for Protein: Q5M7Z0

RNFT1, E3 ubiquitin-protein ligase RNFT1, humanhuman

Predictions only

Length 435 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNFT1Q5M7Z0 KCNC2-207ENST00000548513 3026 ntAPPRIS ALT2 TSL 1 (best) BASIC13.2□□□□□ -0.3
RNFT1Q5M7Z0 CRAT-201ENST00000318080 2763 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
RNFT1Q5M7Z0 OR9I1-201ENST00000302610 945 ntAPPRIS P1 BASIC13.2□□□□□ -0.3
RNFT1Q5M7Z0 RPS9-201ENST00000302907 829 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
RNFT1Q5M7Z0 ZDHHC4-201ENST00000335965 1259 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
RNFT1Q5M7Z0 IGHV3-21-201ENST00000390607 430 ntAPPRIS P1 BASIC13.2□□□□□ -0.3
RNFT1Q5M7Z0 LINC00313-205ENST00000427188 967 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
RNFT1Q5M7Z0 AC026320.2-201ENST00000434379 478 ntBASIC13.2□□□□□ -0.3
RNFT1Q5M7Z0 KCNQ5-IT1-201ENST00000445310 563 ntTSL 2 BASIC13.2□□□□□ -0.3
RNFT1Q5M7Z0 LINC00322-201ENST00000450205 699 ntTSL 3 BASIC13.2□□□□□ -0.3
RNFT1Q5M7Z0 RASA3-IT1-201ENST00000454005 380 ntTSL 3 BASIC13.2□□□□□ -0.3
RNFT1Q5M7Z0 SRSF10-211ENST00000484146 1089 ntTSL 2 BASIC13.2□□□□□ -0.3
RNFT1Q5M7Z0 PGAP2-224ENST00000490830 810 ntTSL 3 BASIC13.2□□□□□ -0.3
RNFT1Q5M7Z0 RN7SL67P-201ENST00000492147 296 ntBASIC13.2□□□□□ -0.3
RNFT1Q5M7Z0 ITGB5-AS1-201ENST00000495917 460 ntTSL 3 BASIC13.2□□□□□ -0.3
RNFT1Q5M7Z0 AC019193.1-201ENST00000506678 823 ntBASIC13.2□□□□□ -0.3
RNFT1Q5M7Z0 AC079349.1-201ENST00000509096 589 ntTSL 2 BASIC13.2□□□□□ -0.3
RNFT1Q5M7Z0 AHNAK-205ENST00000530124 701 ntAPPRIS ALT2 TSL 3 BASIC13.2□□□□□ -0.3
RNFT1Q5M7Z0 STUB1-204ENST00000564370 875 ntTSL 2 BASIC13.2□□□□□ -0.3
RNFT1Q5M7Z0 HS3ST3A1-202ENST00000578576 750 ntTSL 3 BASIC13.2□□□□□ -0.3
RNFT1Q5M7Z0 AC010754.1-201ENST00000582300 1061 ntTSL 3 BASIC13.2□□□□□ -0.3
RNFT1Q5M7Z0 NAT9-224ENST00000583757 583 ntTSL 3 BASIC13.2□□□□□ -0.3
RNFT1Q5M7Z0 HPN-206ENST00000597419 1212 ntTSL 5 BASIC13.2□□□□□ -0.3
RNFT1Q5M7Z0 Z84492.1-201ENST00000606589 408 ntAPPRIS P1 TSL 3 BASIC13.2□□□□□ -0.3
RNFT1Q5M7Z0 AC018635.2-201ENST00000608625 364 ntBASIC13.2□□□□□ -0.3
RNFT1Q5M7Z0 SNX1-214ENST00000625244 324 ntTSL 5 BASIC13.2□□□□□ -0.3
RNFT1Q5M7Z0 ADH5-213ENST00000626055 1299 ntTSL 5 BASIC13.2□□□□□ -0.3
RNFT1Q5M7Z0 TRIM3-215ENST00000639856 2137 ntTSL 5 BASIC13.2□□□□□ -0.3
RNFT1Q5M7Z0 NFATC4-204ENST00000424781 5488 ntAPPRIS ALT2 TSL 1 (best) BASIC13.2□□□□□ -0.3
RNFT1Q5M7Z0 IRGQ-201ENST00000422989 9685 ntAPPRIS P1 TSL 5 BASIC13.2□□□□□ -0.3
RNFT1Q5M7Z0 AKAP1-202ENST00000337714 3970 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
RNFT1Q5M7Z0 MSI2-202ENST00000322684 1860 ntAPPRIS ALT2 TSL 2 BASIC13.2□□□□□ -0.3
RNFT1Q5M7Z0 TMPRSS4-201ENST00000437212 2074 ntAPPRIS P3 TSL 1 (best) BASIC13.2□□□□□ -0.3
RNFT1Q5M7Z0 LATS2-201ENST00000382592 5511 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
RNFT1Q5M7Z0 SVOPL-201ENST00000288513 1413 ntTSL 2 BASIC13.2□□□□□ -0.3
RNFT1Q5M7Z0 SLC35G3-201ENST00000297307 2004 ntAPPRIS P1 BASIC13.2□□□□□ -0.3
RNFT1Q5M7Z0 TICAM2-201ENST00000427199 3049 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
RNFT1Q5M7Z0 STK40-204ENST00000373132 3621 ntAPPRIS P3 TSL 1 (best) BASIC13.2□□□□□ -0.3
RNFT1Q5M7Z0 EXOG-201ENST00000287675 2792 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
RNFT1Q5M7Z0 ABLIM2-201ENST00000341937 2589 ntAPPRIS ALT2 TSL 1 (best) BASIC13.2□□□□□ -0.3
RNFT1Q5M7Z0 AKAP1-201ENST00000314126 2380 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
RNFT1Q5M7Z0 MAGED2-201ENST00000218439 1958 ntAPPRIS P2 TSL 5 BASIC13.2□□□□□ -0.3
RNFT1Q5M7Z0 KHSRPP1-201ENST00000427983 1768 ntBASIC13.2□□□□□ -0.3
RNFT1Q5M7Z0 TAF11-201ENST00000361288 1580 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
RNFT1Q5M7Z0 CLCN7-202ENST00000382745 4720 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
RNFT1Q5M7Z0 LINC00665-205ENST00000585356 1557 ntTSL 2 BASIC13.2□□□□□ -0.3
RNFT1Q5M7Z0 FBN1-205ENST00000560355 4109 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
RNFT1Q5M7Z0 PDPK1-202ENST00000342085 7241 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
RNFT1Q5M7Z0 BRAT1-201ENST00000340611 2915 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
RNFT1Q5M7Z0 PPP2R5C-204ENST00000422945 4481 ntTSL 2 BASIC13.19□□□□□ -0.3
RNFT1Q5M7Z0 PAK6-203ENST00000542403 2540 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
RNFT1Q5M7Z0 NAXD-202ENST00000424185 2311 ntTSL 2 BASIC13.19□□□□□ -0.3
RNFT1Q5M7Z0 TMEM209-202ENST00000462753 2322 ntAPPRIS ALT1 TSL 5 BASIC13.19□□□□□ -0.3
RNFT1Q5M7Z0 MGME1-202ENST00000377709 1936 ntTSL 2 BASIC13.19□□□□□ -0.3
RNFT1Q5M7Z0 TNFRSF10C-201ENST00000356864 1718 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
RNFT1Q5M7Z0 ITPRIPL2-201ENST00000381440 7247 ntAPPRIS P1 BASIC13.19□□□□□ -0.3
RNFT1Q5M7Z0 MICALL1-201ENST00000215957 4710 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
RNFT1Q5M7Z0 PXN-201ENST00000228307 3785 ntAPPRIS P4 TSL 1 (best) BASIC13.19□□□□□ -0.3
RNFT1Q5M7Z0 GRAMD4-203ENST00000408031 2834 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
RNFT1Q5M7Z0 DHCR7-202ENST00000407721 2601 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
RNFT1Q5M7Z0 SLC4A3-202ENST00000317151 4069 ntAPPRIS P1 TSL 5 BASIC13.19□□□□□ -0.3
RNFT1Q5M7Z0 SEC24D-202ENST00000419654 2786 ntTSL 5 BASIC13.19□□□□□ -0.3
RNFT1Q5M7Z0 RASA4B-207ENST00000541662 2794 ntAPPRIS P2 TSL 2 BASIC13.19□□□□□ -0.3
RNFT1Q5M7Z0 TTYH2-206ENST00000529107 2015 ntTSL 2 BASIC13.19□□□□□ -0.3
RNFT1Q5M7Z0 ZSWIM8-221ENST00000604729 6075 ntAPPRIS ALT1 TSL 5 BASIC13.19□□□□□ -0.3
RNFT1Q5M7Z0 MAGEA2-208ENST00000623438 2009 ntAPPRIS P1 TSL 2 BASIC13.19□□□□□ -0.3
RNFT1Q5M7Z0 MC1R-204ENST00000639847 2567 ntAPPRIS P1 TSL 5 BASIC13.19□□□□□ -0.3
RNFT1Q5M7Z0 DMTN-204ENST00000415253 2394 ntTSL 5 BASIC13.19□□□□□ -0.3
RNFT1Q5M7Z0 P2RX3-201ENST00000263314 1831 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
RNFT1Q5M7Z0 THUMPD3-AS1-212ENST00000520447 1809 ntTSL 5 BASIC13.19□□□□□ -0.3
RNFT1Q5M7Z0 RPAIN-201ENST00000327154 815 ntTSL 2 BASIC13.19□□□□□ -0.3
RNFT1Q5M7Z0 CABP1-203ENST00000351200 770 ntAPPRIS ALT1 TSL 1 (best) BASIC13.19□□□□□ -0.3
RNFT1Q5M7Z0 TSPO2-201ENST00000373158 718 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
RNFT1Q5M7Z0 GSG1L-201ENST00000380897 1173 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
RNFT1Q5M7Z0 LINC01006-202ENST00000418309 640 ntTSL 3 BASIC13.19□□□□□ -0.3
RNFT1Q5M7Z0 AC060234.1-201ENST00000422966 474 ntTSL 3 BASIC13.19□□□□□ -0.3
RNFT1Q5M7Z0 RPL8P2-201ENST00000430538 502 ntBASIC13.19□□□□□ -0.3
RNFT1Q5M7Z0 LINC00642-202ENST00000442515 670 ntTSL 3 BASIC13.19□□□□□ -0.3
RNFT1Q5M7Z0 RN7SL258P-201ENST00000478664 300 ntBASIC13.19□□□□□ -0.3
RNFT1Q5M7Z0 LY6E-208ENST00000520531 490 ntTSL 2 BASIC13.19□□□□□ -0.3
RNFT1Q5M7Z0 IGHVIII-5-2-201ENST00000522505 261 ntBASIC13.19□□□□□ -0.3
RNFT1Q5M7Z0 AC138230.1-201ENST00000525893 664 ntTSL 5 BASIC13.19□□□□□ -0.3
RNFT1Q5M7Z0 SIRT3-210ENST00000529382 1225 ntTSL 2 BASIC13.19□□□□□ -0.3
RNFT1Q5M7Z0 SAP25-201ENST00000538735 837 ntAPPRIS P2 TSL 3 BASIC13.19□□□□□ -0.3
RNFT1Q5M7Z0 EMC4-208ENST00000559078 599 ntTSL 3 BASIC13.19□□□□□ -0.3
RNFT1Q5M7Z0 AC135983.1-201ENST00000562108 1097 ntTSL 2 BASIC13.19□□□□□ -0.3
RNFT1Q5M7Z0 AC133919.1-201ENST00000562203 416 ntTSL 3 BASIC13.19□□□□□ -0.3
RNFT1Q5M7Z0 CYB5D1-202ENST00000570446 570 ntTSL 4 BASIC13.19□□□□□ -0.3
RNFT1Q5M7Z0 AC145207.3-201ENST00000576784 529 ntTSL 5 BASIC13.19□□□□□ -0.3
RNFT1Q5M7Z0 AL031282.1-201ENST00000577672 409 ntTSL 3 BASIC13.19□□□□□ -0.3
RNFT1Q5M7Z0 MIR3147-201ENST00000577811 66 ntBASIC13.19□□□□□ -0.3
RNFT1Q5M7Z0 ITGA9-AS1-213ENST00000614028 913 ntTSL 5 BASIC13.19□□□□□ -0.3
RNFT1Q5M7Z0 AL031665.1-201ENST00000619766 572 ntTSL 4 BASIC13.19□□□□□ -0.3
RNFT1Q5M7Z0 CBR3-AS1-213ENST00000623647 815 ntTSL 5 BASIC13.19□□□□□ -0.3
RNFT1Q5M7Z0 SLC12A5-216ENST00000626701 617 ntTSL 3 BASIC13.19□□□□□ -0.3
RNFT1Q5M7Z0 CECR7-202ENST00000441006 2726 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
RNFT1Q5M7Z0 BICDL1-201ENST00000397558 3055 ntAPPRIS P1 TSL 5 BASIC13.19□□□□□ -0.3
RNFT1Q5M7Z0 DUSP22-202ENST00000419235 3098 ntAPPRIS P1 TSL 2 BASIC13.19□□□□□ -0.3
RNFT1Q5M7Z0 AC015688.4-201ENST00000580780 1647 ntBASIC13.19□□□□□ -0.3
RNFT1Q5M7Z0 CCT4-201ENST00000394440 2520 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Retrieved 100 of 98,524 protein–RNA pairs in 37.1 ms